FFCP PHASE1:Hg19::chr15:72462584..72462595,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C83|description=CAGE_peak_at_chr15:72462584..72462595,-|id=chr15:72462584..72462595,-|ontology_enrichment_celltype=CL:0002541!8.75e-23!3;CL:0002536!1.45e-15!2;CL:0002537!1.22e-13!5;CL:0000039!3.28e-10!7;CL:0000586!3.28e-10!7|ontology_enrichment_celltype_v019=CL:0002541;1.70e-27;3!CL:0000039;3.17e-26;7!CL:0000586;3.17e-26;7!CL:0000349;4.97e-26;19!CL:0002537;1.08e-16;5!CL:0002536;4.30e-11;2|ontology_enrichment_celltype_v019_2=CL:0002541,1.39e-27,3;CL:0000039,3.45e-26,7;CL:0000586,3.45e-26,7;CL:0000349,5.11e-26,19;CL:0002537,1.21e-16,5;CL:0002536,4.52e-11,2|ontology_enrichment_development_v019=UBERON:0003124;4.22e-21;1|ontology_enrichment_disease=DOID:1799!6.03e-09!1;DOID:10165!6.03e-09!1;DOID:1798!6.03e-09!1|ontology_enrichment_disease_v019=DOID:1799;2.08e-21;1!DOID:10165;2.08e-21;1!DOID:1798;2.08e-21;1!DOID:3095;8.25e-09;22!DOID:2994;8.25e-09;22|ontology_enrichment_disease_v019_2=DOID:1799,1.88e-21,1;DOID:10165,1.88e-21,1;DOID:1798,1.88e-21,1;DOID:3095,8.47e-09,22;DOID:2994,8.47e-09,22|ontology_enrichment_uberon=UBERON:0005631!3.33e-50!14;UBERON:0000158!3.33e-50!14;UBERON:0000478!1.27e-28!24;UBERON:0003124!4.86e-26!7;UBERON:0000305!9.01e-26!7;UBERON:0000476!8.75e-23!3;UBERON:0000920!8.75e-23!3;UBERON:0004871!1.53e-22!8;UBERON:0004923!2.07e-13!57;UBERON:0001736!2.13e-08!1;UBERON:0006298!2.13e-08!1;UBERON:0001987!3.41e-08!4;UBERON:0004340!3.41e-08!4|ontology_enrichment_uberon_v019=UBERON:0005631;3.97e-49;10!UBERON:0000158;3.97e-49;10!UBERON:0000478;1.90e-29;24!UBERON:0003124;1.70e-27;3!UBERON:0000920;1.70e-27;3!UBERON:0000305;8.85e-26;7!UBERON:0004923;1.06e-07;55|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.29e-50,14;UBERON:0000158,2.29e-50,14;UBERON:0000478,1.86e-29,24;UBERON:0000920,1.39e-27,3;UBERON:0003124,2.91e-26,7;UBERON:0000305,1.05e-25,7;UBERON:0004871,1.36e-22,8;UBERON:0004923,1.03e-10,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,2.07875276582847,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53620294826866,6.91133861955245,2.28159481036217,2.87101043758728,0.549585560411174,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,4.97622719514703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:72462584..72462595,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr15:72462584..72462595,- | |||
|id=chr15:72462584..72462595,- | |||
|ontology_enrichment_celltype=CL:0002541!8.75e-23!3;CL:0002536!1.45e-15!2;CL:0002537!1.22e-13!5;CL:0000039!3.28e-10!7;CL:0000586!3.28e-10!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.70e-27;3!CL:0000039;3.17e-26;7!CL:0000586;3.17e-26;7!CL:0000349;4.97e-26;19!CL:0002537;1.08e-16;5!CL:0002536;4.30e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.39e-27,3;CL:0000039,3.45e-26,7;CL:0000586,3.45e-26,7;CL:0000349,5.11e-26,19;CL:0002537,1.21e-16,5;CL:0002536,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.22e-21;1 | |||
|ontology_enrichment_disease=DOID:1799!6.03e-09!1;DOID:10165!6.03e-09!1;DOID:1798!6.03e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.08e-21;1!DOID:10165;2.08e-21;1!DOID:1798;2.08e-21;1!DOID:3095;8.25e-09;22!DOID:2994;8.25e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.88e-21,1;DOID:10165,1.88e-21,1;DOID:1798,1.88e-21,1;DOID:3095,8.47e-09,22;DOID:2994,8.47e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.33e-50!14;UBERON:0000158!3.33e-50!14;UBERON:0000478!1.27e-28!24;UBERON:0003124!4.86e-26!7;UBERON:0000305!9.01e-26!7;UBERON:0000476!8.75e-23!3;UBERON:0000920!8.75e-23!3;UBERON:0004871!1.53e-22!8;UBERON:0004923!2.07e-13!57;UBERON:0001736!2.13e-08!1;UBERON:0006298!2.13e-08!1;UBERON:0001987!3.41e-08!4;UBERON:0004340!3.41e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.97e-49;10!UBERON:0000158;3.97e-49;10!UBERON:0000478;1.90e-29;24!UBERON:0003124;1.70e-27;3!UBERON:0000920;1.70e-27;3!UBERON:0000305;8.85e-26;7!UBERON:0004923;1.06e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.29e-50,14;UBERON:0000158,2.29e-50,14;UBERON:0000478,1.86e-29,24;UBERON:0000920,1.39e-27,3;UBERON:0003124,2.91e-26,7;UBERON:0000305,1.05e-25,7;UBERON:0004871,1.36e-22,8;UBERON:0004923,1.03e-10,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,2.07875276582847,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53620294826866,6.91133861955245,2.28159481036217,2.87101043758728,0.549585560411174,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,4.97622719514703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:72462584..72462595,- | |||
}} |
Revision as of 08:07, 11 September 2013
Short description: | p@chr15:72462584..72462595, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:72462584..72462595, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.39e-27 | 3 |
germ line cell | 3.45e-26 | 7 |
germ cell | 3.45e-26 | 7 |
extraembryonic cell | 5.11e-26 | 19 |
amnion mesenchymal stem cell | 1.21e-16 | 5 |
amniotic epithelial cell | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.29e-50 | 14 |
membranous layer | 2.29e-50 | 14 |
extraembryonic structure | 1.86e-29 | 24 |
egg chorion | 1.39e-27 | 3 |
chorion | 2.91e-26 | 7 |
amnion | 1.05e-25 | 7 |
somatic layer of lateral plate mesoderm | 1.36e-22 | 8 |
organ component layer | 1.03e-10 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.88e-21 | 1 |
endocrine pancreas cancer | 1.88e-21 | 1 |
pancreatic endocrine carcinoma | 1.88e-21 | 1 |
germ cell and embryonal cancer | 8.47e-09 | 22 |
germ cell cancer | 8.47e-09 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.