FFCP PHASE1:Hg19::chr15:74494832..74494841,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64220|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30650|TSSclassifier=S|UniProt=B7Z5G7|association_with_transcript=21bp_to_AK298921_5end|coexpression_cluster_id=C3513|description=CAGE_peak_7_at_STRA6_5end|id=chr15:74494832..74494841,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;5.93e-11;3!CL:1000428;5.93e-11;3!CL:0002575;2.04e-08;2!CL:0002549;8.15e-08;2!CL:0002559;9.97e-07;5|ontology_enrichment_celltype_v019_2=CL:0000346,2.90e-11,3;CL:1000428,2.90e-11,3;CL:0002575,2.12e-08,2;CL:0002549,5.31e-08,2;CL:0002559,6.57e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!3.64e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!5.86e-11!14;UBERON:0000158!5.86e-11!14;UBERON:0000020!7.92e-10!23;UBERON:0001032!3.21e-09!24;UBERON:0004456!3.21e-09!24;UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0000970!4.44e-08!20;UBERON:0000478!4.57e-08!24;UBERON:0002203!9.78e-08!6;UBERON:0001768!9.78e-08!6;UBERON:0002104!1.62e-07!21;UBERON:0001264!1.67e-07!10;UBERON:0003922!1.67e-07!10;UBERON:0003923!1.67e-07!10;UBERON:0003924!1.67e-07!10;UBERON:0003921!1.67e-07!10;UBERON:0000019!2.29e-07!19;UBERON:0000047!2.29e-07!19;UBERON:0004088!2.29e-07!19;UBERON:0003072!2.29e-07!19;UBERON:0003071!2.29e-07!19;UBERON:0004128!2.29e-07!19;UBERON:0003124!7.06e-07!7;UBERON:0002114!8.02e-07!12;UBERON:0002108!9.27e-07!14;UBERON:0007625!9.45e-07!11|ontology_enrichment_uberon_v019=UBERON:0000412;5.93e-11;3!UBERON:0001992;5.93e-11;3!UBERON:0006876;2.80e-10;11!UBERON:0001264;6.63e-09;10!UBERON:0002203;7.12e-09;6!UBERON:0001768;7.12e-09;6!UBERON:0002200;7.12e-09;6!UBERON:0001987;2.38e-08;4!UBERON:0001801;4.50e-08;14!UBERON:0000488;6.84e-08;4!UBERON:0005629;8.15e-08;2!UBERON:0005358;8.15e-08;2!UBERON:0001886;8.15e-08;2!UBERON:0004086;8.15e-08;2!UBERON:0005282;8.15e-08;2!UBERON:0005281;8.15e-08;2!UBERON:0007625;1.77e-07;11!UBERON:0002073;9.97e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.90e-12,7;UBERON:0000412,2.90e-11,3;UBERON:0001992,2.90e-11,3;UBERON:0005631,4.41e-11,14;UBERON:0000158,4.41e-11,14;UBERON:0006876,3.44e-10,11;UBERON:0001264,7.19e-09,10;UBERON:0002203,1.19e-08,6;UBERON:0001768,1.19e-08,6;UBERON:0002200,1.19e-08,6;UBERON:0001987,1.95e-08,4;UBERON:0004340,1.95e-08,4;UBERON:0005629,5.31e-08,2;UBERON:0005358,5.31e-08,2;UBERON:0001886,5.31e-08,2;UBERON:0004086,5.31e-08,2;UBERON:0005282,5.31e-08,2;UBERON:0005281,5.31e-08,2;UBERON:0001801,5.90e-08,14;UBERON:0000488,8.87e-08,4;UBERON:0007625,1.95e-07,11;UBERON:0005085,3.21e-07,31;UBERON:0002073,6.57e-07,5;UBERON:0005086,6.57e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,1.31883489114227,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,1.13441780596881,1.33037638477538,0.966182642624386,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,1.66493170409425,2.30470369792,0.70296429550139,0,0,0,0,0,0,0,0.122834317311768,0,0,0,1.82032272387605,0,0.336672227908132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.310983165046111,0,1.45990943630332,6.25798129319264,1.92972281457866,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,1.20097467208968,0,0,0,0,0,0,2.88662684050547,0.695582429850461,2.23076519048061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.897048674762886,0.43596006883328,0.36669142910475,0.129271715757778,0,0,2.12750493267896,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,6.06983588134496,2.40200396667599,0,0,0,1.21251028578504,0,1.5119514666484,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,1.03850885836724,0,0.120859449591622,0,0,1.14814448164607,2.73136752010076,0.393373244878272,0,0,0,1.46139224653261,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,3.29731237272711,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,1.09199929126389,0,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0,0,0,0.75894634753143,1.04980416073495,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0.747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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30650 | |||
|TSSclassifier=S | |||
|UniProt=B7Z5G7 | |||
|association_with_transcript=21bp_to_AK298921_5end | |||
|coexpression_cluster_id=C3513 | |||
|description=CAGE_peak_7_at_STRA6_5end | |||
|id=chr15:74494832..74494841,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.93e-11;3!CL:1000428;5.93e-11;3!CL:0002575;2.04e-08;2!CL:0002549;8.15e-08;2!CL:0002559;9.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.90e-11,3;CL:1000428,2.90e-11,3;CL:0002575,2.12e-08,2;CL:0002549,5.31e-08,2;CL:0002559,6.57e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.64e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.86e-11!14;UBERON:0000158!5.86e-11!14;UBERON:0000020!7.92e-10!23;UBERON:0001032!3.21e-09!24;UBERON:0004456!3.21e-09!24;UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0000970!4.44e-08!20;UBERON:0000478!4.57e-08!24;UBERON:0002203!9.78e-08!6;UBERON:0001768!9.78e-08!6;UBERON:0002104!1.62e-07!21;UBERON:0001264!1.67e-07!10;UBERON:0003922!1.67e-07!10;UBERON:0003923!1.67e-07!10;UBERON:0003924!1.67e-07!10;UBERON:0003921!1.67e-07!10;UBERON:0000019!2.29e-07!19;UBERON:0000047!2.29e-07!19;UBERON:0004088!2.29e-07!19;UBERON:0003072!2.29e-07!19;UBERON:0003071!2.29e-07!19;UBERON:0004128!2.29e-07!19;UBERON:0003124!7.06e-07!7;UBERON:0002114!8.02e-07!12;UBERON:0002108!9.27e-07!14;UBERON:0007625!9.45e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.93e-11;3!UBERON:0001992;5.93e-11;3!UBERON:0006876;2.80e-10;11!UBERON:0001264;6.63e-09;10!UBERON:0002203;7.12e-09;6!UBERON:0001768;7.12e-09;6!UBERON:0002200;7.12e-09;6!UBERON:0001987;2.38e-08;4!UBERON:0001801;4.50e-08;14!UBERON:0000488;6.84e-08;4!UBERON:0005629;8.15e-08;2!UBERON:0005358;8.15e-08;2!UBERON:0001886;8.15e-08;2!UBERON:0004086;8.15e-08;2!UBERON:0005282;8.15e-08;2!UBERON:0005281;8.15e-08;2!UBERON:0007625;1.77e-07;11!UBERON:0002073;9.97e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.90e-12,7;UBERON:0000412,2.90e-11,3;UBERON:0001992,2.90e-11,3;UBERON:0005631,4.41e-11,14;UBERON:0000158,4.41e-11,14;UBERON:0006876,3.44e-10,11;UBERON:0001264,7.19e-09,10;UBERON:0002203,1.19e-08,6;UBERON:0001768,1.19e-08,6;UBERON:0002200,1.19e-08,6;UBERON:0001987,1.95e-08,4;UBERON:0004340,1.95e-08,4;UBERON:0005629,5.31e-08,2;UBERON:0005358,5.31e-08,2;UBERON:0001886,5.31e-08,2;UBERON:0004086,5.31e-08,2;UBERON:0005282,5.31e-08,2;UBERON:0005281,5.31e-08,2;UBERON:0001801,5.90e-08,14;UBERON:0000488,8.87e-08,4;UBERON:0007625,1.95e-07,11;UBERON:0005085,3.21e-07,31;UBERON:0002073,6.57e-07,5;UBERON:0005086,6.57e-07,5 | |||
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|short_description=p7@STRA6 | |||
}} |
Revision as of 08:13, 11 September 2013
Short description: | p7@STRA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_STRA6_5end |
Coexpression cluster: | C3513_Pericytes_placenta_embryonic_mesenchymal_Mesenchymal_neuroblastoma_Fibroblast |
Association with transcript: | 21bp_to_AK298921_5end |
EntrezGene: | STRA6 |
HGNC: | 30650 |
UniProt: | B7Z5G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.90e-11 | 3 |
stem cell of epidermis | 2.90e-11 | 3 |
central nervous system pericyte | 2.12e-08 | 2 |
fibroblast of choroid plexus | 5.31e-08 | 2 |
hair follicle cell | 6.57e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.90e-12 | 7 |
dermal papilla | 2.90e-11 | 3 |
papillary layer of dermis | 2.90e-11 | 3 |
extraembryonic membrane | 4.41e-11 | 14 |
membranous layer | 4.41e-11 | 14 |
vasculature of organ | 3.44e-10 | 11 |
pancreas | 7.19e-09 | 10 |
vasculature of eye | 1.19e-08 | 6 |
uvea | 1.19e-08 | 6 |
vasculature of head | 1.19e-08 | 6 |
placenta | 1.95e-08 | 4 |
allantois | 1.95e-08 | 4 |
vascular plexus | 5.31e-08 | 2 |
ventricle of nervous system | 5.31e-08 | 2 |
choroid plexus | 5.31e-08 | 2 |
brain ventricle | 5.31e-08 | 2 |
ventricular system of brain | 5.31e-08 | 2 |
ventricular system of central nervous system | 5.31e-08 | 2 |
anterior segment of eyeball | 5.90e-08 | 14 |
atypical epithelium | 8.87e-08 | 4 |
pigment epithelium of eye | 1.95e-07 | 11 |
ectodermal placode | 3.21e-07 | 31 |
hair follicle | 6.57e-07 | 5 |
hair follicle placode | 6.57e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.