FFCP PHASE1:Hg19::chr15:92484587..92484596,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=28232|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10952|TSSclassifier=S|UniProt=G3V4E8|association_with_transcript=39bp_to_ENST00000556649_5end|description=CAGE_peak_14_at_SLCO3A1_5end|id=chr15:92484587..92484596,+|ontology_enrichment_celltype=CL:1000415!8.50e-16!2;CL:0000039!2.39e-10!7;CL:0000586!2.39e-10!7;CL:1001319!9.74e-09!1;CL:1000600!9.74e-09!1;CL:0000066!5.88e-08!254|ontology_enrichment_celltype_v019=CL:1000415;5.69e-21;2!CL:0000307;1.83e-14;3!CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6!CL:0000039;5.22e-07;7!CL:0000586;5.22e-07;7|ontology_enrichment_celltype_v019_2=CL:1000415,5.70e-21,2;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0002149,6.34e-08,6;CL:0002255,6.34e-08,6;CL:0000039,5.38e-07,7;CL:0000586,5.38e-07,7|ontology_enrichment_development_v019=CL:0000377;1.83e-14;3|ontology_enrichment_disease=DOID:0050687!2.30e-13!143;DOID:305!8.68e-13!106;DOID:178!7.18e-09!1;DOID:326!7.18e-09!1;DOID:3978!7.18e-09!1;DOID:3394!7.18e-09!1;DOID:5844!7.18e-09!1;DOID:162!9.14e-07!235|ontology_enrichment_disease_v019=DOID:3001;6.78e-08;6|ontology_enrichment_disease_v019_2=DOID:3001,6.34e-08,6|ontology_enrichment_uberon=UBERON:0002110!7.67e-11!3;UBERON:0006242!7.67e-11!3;UBERON:0002294!5.57e-10!7;UBERON:0001173!5.57e-10!7;UBERON:0004912!5.57e-10!7;UBERON:0000997!3.06e-09!1;UBERON:0005056!3.06e-09!1;UBERON:0004645!9.74e-09!1;UBERON:0001256!9.74e-09!1;UBERON:0001259!9.74e-09!1;UBERON:0004913!1.78e-08!1;UBERON:0003703!1.78e-08!1;UBERON:0001174!1.78e-08!1;UBERON:0004914!1.78e-08!1;UBERON:0001737!9.57e-08!9;UBERON:0000365!6.65e-07!5|ontology_enrichment_uberon_v019=UBERON:0000997;8.10e-41;1!UBERON:0005056;8.10e-41;1!UBERON:0004176;8.10e-41;1!UBERON:0002110;1.83e-14;3!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.62e-41,1;UBERON:0005056,6.62e-41,1;UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07507513949254,0.269272933229316,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,2.84177952501695,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8328549483524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0|short_description=p14@SLCO3A1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=28232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10952 | |||
|TSSclassifier=S | |||
|UniProt=G3V4E8 | |||
|association_with_transcript=39bp_to_ENST00000556649_5end | |||
|description=CAGE_peak_14_at_SLCO3A1_5end | |||
|id=chr15:92484587..92484596,+ | |||
|ontology_enrichment_celltype=CL:1000415!8.50e-16!2;CL:0000039!2.39e-10!7;CL:0000586!2.39e-10!7;CL:1001319!9.74e-09!1;CL:1000600!9.74e-09!1;CL:0000066!5.88e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000415;5.69e-21;2!CL:0000307;1.83e-14;3!CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6!CL:0000039;5.22e-07;7!CL:0000586;5.22e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.70e-21,2;CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3;CL:0002149,6.34e-08,6;CL:0002255,6.34e-08,6;CL:0000039,5.38e-07,7;CL:0000586,5.38e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000377;1.83e-14;3 | |||
|ontology_enrichment_disease=DOID:0050687!2.30e-13!143;DOID:305!8.68e-13!106;DOID:178!7.18e-09!1;DOID:326!7.18e-09!1;DOID:3978!7.18e-09!1;DOID:3394!7.18e-09!1;DOID:5844!7.18e-09!1;DOID:162!9.14e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,6.34e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002110!7.67e-11!3;UBERON:0006242!7.67e-11!3;UBERON:0002294!5.57e-10!7;UBERON:0001173!5.57e-10!7;UBERON:0004912!5.57e-10!7;UBERON:0000997!3.06e-09!1;UBERON:0005056!3.06e-09!1;UBERON:0004645!9.74e-09!1;UBERON:0001256!9.74e-09!1;UBERON:0001259!9.74e-09!1;UBERON:0004913!1.78e-08!1;UBERON:0003703!1.78e-08!1;UBERON:0001174!1.78e-08!1;UBERON:0004914!1.78e-08!1;UBERON:0001737!9.57e-08!9;UBERON:0000365!6.65e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;8.10e-41;1!UBERON:0005056;8.10e-41;1!UBERON:0004176;8.10e-41;1!UBERON:0002110;1.83e-14;3!UBERON:0003126;6.04e-07;7!UBERON:0001005;6.04e-07;7!UBERON:0002294;6.04e-07;7!UBERON:0001173;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.62e-41,1;UBERON:0005056,6.62e-41,1;UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07507513949254,0.269272933229316,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,2.84177952501695,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8328549483524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@SLCO3A1 | |||
}} |
Revision as of 08:58, 11 September 2013
Short description: | p14@SLCO3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SLCO3A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000556649_5end |
EntrezGene: | SLCO3A1 |
HGNC: | 10952 |
UniProt: | G3V4E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.70e-21 | 2 |
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
epithelial cell of uterus | 6.34e-08 | 6 |
stromal cell of endometrium | 6.34e-08 | 6 |
germ line cell | 5.38e-07 | 7 |
germ cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.62e-41 | 1 |
external female genitalia | 6.62e-41 | 1 |
gallbladder | 1.83e-14 | 3 |
gall bladder primordium | 1.83e-14 | 3 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 6.34e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.