FFCP PHASE1:Hg19::chr17:67513291..67513311,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C342|description=CAGE_peak_at_chr17:67513291..67513311,+|id=chr17:67513291..67513311,+|ontology_enrichment_celltype=CL:0000945!4.82e-16!24;CL:0000826!4.82e-16!24;CL:0000946!9.44e-10!1;CL:0000786!9.44e-10!1;CL:0000980!9.44e-10!1;CL:0002553!1.69e-09!1;CL:0000838!5.68e-07!52;CL:0000542!7.96e-07!53;CL:0000051!7.96e-07!53|ontology_enrichment_celltype_v019=CL:0000946;1.67e-23;1!CL:0000786;1.67e-23;1!CL:0000945;3.98e-23;24|ontology_enrichment_celltype_v019_2=CL:0000946,1.67e-23,1;CL:0000786,1.67e-23,1;CL:0000980,1.67e-23,1;CL:0000945,3.98e-23,24;CL:0000826,3.98e-23,24;CL:0000785,1.85e-12,2;CL:0000955,1.85e-12,2;CL:0000818,1.85e-12,2;CL:0000954,1.85e-12,2;CL:0000816,1.85e-12,2;CL:0000838,8.41e-11,52;CL:0000542,1.34e-10,53;CL:0000051,1.34e-10,53;CL:0000817,9.66e-09,3;CL:0002087,8.01e-07,115|ontology_enrichment_development_v019=UBERON:0001045;4.10e-23;1!CL:0000954;1.85e-12;2|ontology_enrichment_disease=DOID:630!8.68e-10!1;DOID:0050177!8.68e-10!1;DOID:0050427!8.68e-10!1|ontology_enrichment_disease_v019=DOID:630;1.34e-23;1!DOID:0050177;1.34e-23;1!DOID:0050427;1.34e-23;1|ontology_enrichment_disease_v019_2=DOID:630,1.34e-23,1;DOID:0050177,1.34e-23,1;DOID:0050427,1.34e-23,1|ontology_enrichment_uberon=UBERON:0002106!1.81e-24!3;UBERON:0004854!1.81e-24!3;UBERON:0009034!1.81e-24!3;UBERON:0002095!1.81e-24!3;UBERON:0004782!1.81e-24!3;UBERON:0003281!1.81e-24!3;UBERON:0009664!1.81e-24!3;UBERON:0002296!1.81e-24!3;UBERON:0005602!1.81e-24!3;UBERON:0001179!1.81e-24!3;UBERON:0006293!1.81e-24!3;UBERON:0004177!7.97e-11!7;UBERON:0001154!1.43e-09!1;UBERON:0001153!1.43e-09!1;UBERON:0000945!1.55e-09!8;UBERON:0010039!1.55e-09!8;UBERON:0002372!2.77e-09!1;UBERON:0001961!2.77e-09!1;UBERON:0001744!2.77e-09!1;UBERON:0001735!2.77e-09!1|ontology_enrichment_uberon_v019=UBERON:0001154;4.10e-23;1!UBERON:0001153;4.10e-23;1!UBERON:0009854;4.10e-23;1!UBERON:0002106;8.31e-09;3!UBERON:0009856;9.10e-07;4!UBERON:0002119;9.10e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1;UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3;UBERON:0002119,9.11e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,1.06730766284929,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34940933649081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22655165156182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,6.19635166734559,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,4.48795889224526|short_description=p@chr17:67513291..67513311,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr17:67513291..67513311,+ | |||
|id=chr17:67513291..67513311,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.82e-16!24;CL:0000826!4.82e-16!24;CL:0000946!9.44e-10!1;CL:0000786!9.44e-10!1;CL:0000980!9.44e-10!1;CL:0002553!1.69e-09!1;CL:0000838!5.68e-07!52;CL:0000542!7.96e-07!53;CL:0000051!7.96e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.67e-23;1!CL:0000786;1.67e-23;1!CL:0000945;3.98e-23;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.67e-23,1;CL:0000786,1.67e-23,1;CL:0000980,1.67e-23,1;CL:0000945,3.98e-23,24;CL:0000826,3.98e-23,24;CL:0000785,1.85e-12,2;CL:0000955,1.85e-12,2;CL:0000818,1.85e-12,2;CL:0000954,1.85e-12,2;CL:0000816,1.85e-12,2;CL:0000838,8.41e-11,52;CL:0000542,1.34e-10,53;CL:0000051,1.34e-10,53;CL:0000817,9.66e-09,3;CL:0002087,8.01e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.10e-23;1!CL:0000954;1.85e-12;2 | |||
|ontology_enrichment_disease=DOID:630!8.68e-10!1;DOID:0050177!8.68e-10!1;DOID:0050427!8.68e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.34e-23;1!DOID:0050177;1.34e-23;1!DOID:0050427;1.34e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.34e-23,1;DOID:0050177,1.34e-23,1;DOID:0050427,1.34e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.81e-24!3;UBERON:0004854!1.81e-24!3;UBERON:0009034!1.81e-24!3;UBERON:0002095!1.81e-24!3;UBERON:0004782!1.81e-24!3;UBERON:0003281!1.81e-24!3;UBERON:0009664!1.81e-24!3;UBERON:0002296!1.81e-24!3;UBERON:0005602!1.81e-24!3;UBERON:0001179!1.81e-24!3;UBERON:0006293!1.81e-24!3;UBERON:0004177!7.97e-11!7;UBERON:0001154!1.43e-09!1;UBERON:0001153!1.43e-09!1;UBERON:0000945!1.55e-09!8;UBERON:0010039!1.55e-09!8;UBERON:0002372!2.77e-09!1;UBERON:0001961!2.77e-09!1;UBERON:0001744!2.77e-09!1;UBERON:0001735!2.77e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.10e-23;1!UBERON:0001153;4.10e-23;1!UBERON:0009854;4.10e-23;1!UBERON:0002106;8.31e-09;3!UBERON:0009856;9.10e-07;4!UBERON:0002119;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1;UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3;UBERON:0002119,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,1.06730766284929,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34940933649081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22655165156182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,6.19635166734559,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0,4.48795889224526 | |||
|short_description=p@chr17:67513291..67513311,+ | |||
}} |
Revision as of 15:17, 11 September 2013
Short description: | p@chr17:67513291..67513311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:67513291..67513311, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.67e-23 | 1 |
plasma cell | 1.67e-23 | 1 |
plasmablast | 1.67e-23 | 1 |
lymphocyte of B lineage | 3.98e-23 | 24 |
pro-B cell | 3.98e-23 | 24 |
mature B cell | 1.85e-12 | 2 |
pre-B-II cell | 1.85e-12 | 2 |
transitional stage B cell | 1.85e-12 | 2 |
small pre-B-II cell | 1.85e-12 | 2 |
immature B cell | 1.85e-12 | 2 |
lymphoid lineage restricted progenitor cell | 8.41e-11 | 52 |
lymphocyte | 1.34e-10 | 53 |
common lymphoid progenitor | 1.34e-10 | 53 |
precursor B cell | 9.66e-09 | 3 |
nongranular leukocyte | 8.01e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.13e-23 | 1 |
caecum | 5.13e-23 | 1 |
midgut | 5.13e-23 | 1 |
spleen | 8.31e-09 | 3 |
gastrointestinal system mesentery | 8.31e-09 | 3 |
stomach region | 8.31e-09 | 3 |
mesentery | 8.31e-09 | 3 |
gastrointestinal system serosa | 8.31e-09 | 3 |
mesentery of stomach | 8.31e-09 | 3 |
gut mesentery | 8.31e-09 | 3 |
dorsal mesentery | 8.31e-09 | 3 |
dorsal mesogastrium | 8.31e-09 | 3 |
peritoneal cavity | 8.31e-09 | 3 |
spleen primordium | 8.31e-09 | 3 |
left ovary | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.34e-23 | 1 |
monogenic disease | 1.34e-23 | 1 |
xeroderma pigmentosum | 1.34e-23 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.