FFCP PHASE1:Hg19::chr18:31433349..31433357,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C78|description=CAGE_peak_at_chr18:31433349..31433357,-|id=chr18:31433349..31433357,-|ontology_enrichment_celltype=CL:0000817!2.18e-38!3;CL:0000819!9.99e-30!1;CL:0000945!2.12e-19!24;CL:0000826!2.12e-19!24;CL:0000785!1.33e-15!2;CL:0000955!1.33e-15!2;CL:0000818!1.33e-15!2;CL:0000954!1.33e-15!2;CL:0000816!1.33e-15!2;CL:0000542!9.98e-14!53;CL:0000051!9.98e-14!53;CL:0000838!3.09e-09!52;CL:0000236!4.56e-09!14;CL:0002087!1.00e-08!119;CL:0000738!1.91e-07!140|ontology_enrichment_celltype_v019=CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000945;2.00e-19;24!CL:0000542;3.03e-10;53!CL:0002087;4.32e-08;104|ontology_enrichment_celltype_v019_2=CL:0000819,2.42e-50,1;CL:0000785,5.56e-26,2;CL:0000955,5.56e-26,2;CL:0000818,5.56e-26,2;CL:0000954,5.56e-26,2;CL:0000816,5.56e-26,2;CL:0000945,1.88e-19,24;CL:0000826,1.88e-19,24;CL:0000817,8.00e-18,3;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000838,1.73e-09,52;CL:0002087,1.17e-07,115|ontology_enrichment_development_v019=CL:0000954;7.14e-26;2!CL:0000051;3.03e-10;53|ontology_enrichment_disease=DOID:0060073!9.99e-30!1;DOID:8675!9.99e-30!1;DOID:12603!1.78e-29!1;DOID:0060058!1.89e-12!10;DOID:2531!2.13e-09!51;DOID:0060083!2.13e-09!51|ontology_enrichment_disease_v019=DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:12603;3.99e-50;1!DOID:0060058;7.72e-21;10!DOID:2531;3.79e-07;51!DOID:0060083;3.79e-07;51|ontology_enrichment_disease_v019_2=DOID:0060073,2.42e-50,1;DOID:8675,2.42e-50,1;DOID:12603,6.58e-50,1;DOID:0060058,6.99e-21,10;DOID:2531,1.21e-09,51;DOID:0060083,1.21e-09,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30062222588003,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11528913199763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:31433349..31433357,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr18:31433349..31433357,- | |||
|id=chr18:31433349..31433357,- | |||
|ontology_enrichment_celltype=CL:0000817!2.18e-38!3;CL:0000819!9.99e-30!1;CL:0000945!2.12e-19!24;CL:0000826!2.12e-19!24;CL:0000785!1.33e-15!2;CL:0000955!1.33e-15!2;CL:0000818!1.33e-15!2;CL:0000954!1.33e-15!2;CL:0000816!1.33e-15!2;CL:0000542!9.98e-14!53;CL:0000051!9.98e-14!53;CL:0000838!3.09e-09!52;CL:0000236!4.56e-09!14;CL:0002087!1.00e-08!119;CL:0000738!1.91e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000945;2.00e-19;24!CL:0000542;3.03e-10;53!CL:0002087;4.32e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.42e-50,1;CL:0000785,5.56e-26,2;CL:0000955,5.56e-26,2;CL:0000818,5.56e-26,2;CL:0000954,5.56e-26,2;CL:0000816,5.56e-26,2;CL:0000945,1.88e-19,24;CL:0000826,1.88e-19,24;CL:0000817,8.00e-18,3;CL:0000542,9.01e-16,53;CL:0000051,9.01e-16,53;CL:0000838,1.73e-09,52;CL:0002087,1.17e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000954;7.14e-26;2!CL:0000051;3.03e-10;53 | |||
|ontology_enrichment_disease=DOID:0060073!9.99e-30!1;DOID:8675!9.99e-30!1;DOID:12603!1.78e-29!1;DOID:0060058!1.89e-12!10;DOID:2531!2.13e-09!51;DOID:0060083!2.13e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:12603;3.99e-50;1!DOID:0060058;7.72e-21;10!DOID:2531;3.79e-07;51!DOID:0060083;3.79e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.42e-50,1;DOID:8675,2.42e-50,1;DOID:12603,6.58e-50,1;DOID:0060058,6.99e-21,10;DOID:2531,1.21e-09,51;DOID:0060083,1.21e-09,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30062222588003,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11528913199763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:31433349..31433357,- | |||
}} |
Revision as of 17:15, 11 September 2013
Short description: | p@chr18:31433349..31433357, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:31433349..31433357, - |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.42e-50 | 1 |
mature B cell | 5.56e-26 | 2 |
pre-B-II cell | 5.56e-26 | 2 |
transitional stage B cell | 5.56e-26 | 2 |
small pre-B-II cell | 5.56e-26 | 2 |
immature B cell | 5.56e-26 | 2 |
lymphocyte of B lineage | 1.88e-19 | 24 |
pro-B cell | 1.88e-19 | 24 |
precursor B cell | 8.00e-18 | 3 |
lymphocyte | 9.01e-16 | 53 |
common lymphoid progenitor | 9.01e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.73e-09 | 52 |
nongranular leukocyte | 1.17e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.42e-50 | 1 |
lymphosarcoma | 2.42e-50 | 1 |
acute leukemia | 6.58e-50 | 1 |
lymphoma | 6.99e-21 | 10 |
hematologic cancer | 1.21e-09 | 51 |
immune system cancer | 1.21e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.