FFCP PHASE1:Hg19::chr18:3412005..3412009,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7050|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11776|TSSclassifier=S|UniProt=A6NE42,Q15583|association_with_transcript=-62bp_to_ENST00000401449,NM_174886,uc002klu.2_5end|coexpression_cluster_id=C136|description=CAGE_peak_49_at_TGIF1_5end|id=chr18:3412005..3412009,+|ontology_enrichment_celltype=CL:0002541!8.83e-22!3;CL:0000082!3.14e-09!19|ontology_enrichment_celltype_v019=CL:1000415;6.30e-21;2!CL:0002541;1.60e-14;3!CL:0000082;2.26e-09;19|ontology_enrichment_celltype_v019_2=CL:1000415,6.96e-21,2;CL:0002541,1.60e-14,3;CL:0000082,2.17e-09,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1324!9.44e-12!15;DOID:0050615!5.28e-11!16|ontology_enrichment_disease_v019=DOID:1324;1.34e-11;15!DOID:0050615;6.14e-11;16!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7|ontology_enrichment_disease_v019_2=DOID:1324,1.27e-11,15;DOID:0050615,5.84e-11,16;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7|ontology_enrichment_uberon=UBERON:0000476!8.83e-22!3;UBERON:0000920!8.83e-22!3;UBERON:0003124!2.95e-16!7;UBERON:0005631!2.20e-12!14;UBERON:0000158!2.20e-12!14;UBERON:0002110!1.87e-10!3;UBERON:0006242!1.87e-10!3;UBERON:0002294!1.25e-09!7;UBERON:0001173!1.25e-09!7;UBERON:0004912!1.25e-09!7;UBERON:0004802!3.14e-09!19;UBERON:0000115!3.14e-09!19;UBERON:0007029!1.88e-08!1;UBERON:0002048!6.14e-08!22;UBERON:0000117!6.14e-08!22;UBERON:0000171!6.14e-08!22;UBERON:0000170!6.14e-08!22;UBERON:0005597!6.14e-08!22;UBERON:0000118!6.14e-08!22;UBERON:0000478!3.93e-07!24;UBERON:0005178!6.11e-07!34;UBERON:0002224!6.11e-07!34;UBERON:0005911!7.10e-07!82|ontology_enrichment_uberon_v019=UBERON:0003124;1.60e-14;3!UBERON:0000920;1.60e-14;3!UBERON:0002110;1.96e-14;3!UBERON:0004802;2.26e-09;19!UBERON:0000115;2.26e-09;19!UBERON:0002048;3.15e-08;22!UBERON:0004807;3.15e-08;22!UBERON:0000117;3.15e-08;22!UBERON:0000171;3.15e-08;22!UBERON:0000170;3.15e-08;22!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.60e-14,3;UBERON:0002110,2.09e-14,3;UBERON:0006242,2.09e-14,3;UBERON:0004802,2.17e-09,19;UBERON:0000115,2.17e-09,19;UBERON:0002048,3.04e-08,22;UBERON:0000117,3.04e-08,22;UBERON:0000171,3.04e-08,22;UBERON:0000170,3.04e-08,22;UBERON:0005597,3.04e-08,22;UBERON:0000118,3.04e-08,22;UBERON:0003124,5.70e-07,7;UBERON:0005177,6.30e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,5.02073134299124,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.807818799687949,0,0.957003479195758,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,5.63852017853338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p49@TGIF1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |||
|TSSclassifier=S | |||
|UniProt=A6NE42,Q15583 | |||
|association_with_transcript=-62bp_to_ENST00000401449,NM_174886,uc002klu.2_5end | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_49_at_TGIF1_5end | |||
|id=chr18:3412005..3412009,+ | |||
|ontology_enrichment_celltype=CL:0002541!8.83e-22!3;CL:0000082!3.14e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:1000415;6.30e-21;2!CL:0002541;1.60e-14;3!CL:0000082;2.26e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.96e-21,2;CL:0002541,1.60e-14,3;CL:0000082,2.17e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1324!9.44e-12!15;DOID:0050615!5.28e-11!16 | |||
|ontology_enrichment_disease_v019=DOID:1324;1.34e-11;15!DOID:0050615;6.14e-11;16!DOID:1325;6.21e-07;7!DOID:3904;6.21e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.27e-11,15;DOID:0050615,5.84e-11,16;DOID:1325,6.04e-07,7;DOID:3904,6.04e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000476!8.83e-22!3;UBERON:0000920!8.83e-22!3;UBERON:0003124!2.95e-16!7;UBERON:0005631!2.20e-12!14;UBERON:0000158!2.20e-12!14;UBERON:0002110!1.87e-10!3;UBERON:0006242!1.87e-10!3;UBERON:0002294!1.25e-09!7;UBERON:0001173!1.25e-09!7;UBERON:0004912!1.25e-09!7;UBERON:0004802!3.14e-09!19;UBERON:0000115!3.14e-09!19;UBERON:0007029!1.88e-08!1;UBERON:0002048!6.14e-08!22;UBERON:0000117!6.14e-08!22;UBERON:0000171!6.14e-08!22;UBERON:0000170!6.14e-08!22;UBERON:0005597!6.14e-08!22;UBERON:0000118!6.14e-08!22;UBERON:0000478!3.93e-07!24;UBERON:0005178!6.11e-07!34;UBERON:0002224!6.11e-07!34;UBERON:0005911!7.10e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.60e-14;3!UBERON:0000920;1.60e-14;3!UBERON:0002110;1.96e-14;3!UBERON:0004802;2.26e-09;19!UBERON:0000115;2.26e-09;19!UBERON:0002048;3.15e-08;22!UBERON:0004807;3.15e-08;22!UBERON:0000117;3.15e-08;22!UBERON:0000171;3.15e-08;22!UBERON:0000170;3.15e-08;22!UBERON:0002294;6.21e-07;7!UBERON:0001173;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.60e-14,3;UBERON:0002110,2.09e-14,3;UBERON:0006242,2.09e-14,3;UBERON:0004802,2.17e-09,19;UBERON:0000115,2.17e-09,19;UBERON:0002048,3.04e-08,22;UBERON:0000117,3.04e-08,22;UBERON:0000171,3.04e-08,22;UBERON:0000170,3.04e-08,22;UBERON:0005597,3.04e-08,22;UBERON:0000118,3.04e-08,22;UBERON:0003124,5.70e-07,7;UBERON:0005177,6.30e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,5.02073134299124,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.807818799687949,0,0.957003479195758,0.0915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36885967914362,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,5.63852017853338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p49@TGIF1 | |||
}} |
Revision as of 17:21, 11 September 2013
Short description: | p49@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_49_at_TGIF1_5end |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | -62bp_to_ENST00000401449, NM_174886, uc002klu.2_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | A6NE42Q15583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.96e-21 | 2 |
chorionic membrane mesenchymal stem cell | 1.60e-14 | 3 |
epithelial cell of lung | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.60e-14 | 3 |
gallbladder | 2.09e-14 | 3 |
gall bladder primordium | 2.09e-14 | 3 |
respiratory tract epithelium | 2.17e-09 | 19 |
lung epithelium | 2.17e-09 | 19 |
lung | 3.04e-08 | 22 |
respiratory tube | 3.04e-08 | 22 |
respiration organ | 3.04e-08 | 22 |
pair of lungs | 3.04e-08 | 22 |
lung primordium | 3.04e-08 | 22 |
lung bud | 3.04e-08 | 22 |
chorion | 5.70e-07 | 7 |
trunk region element | 6.30e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.27e-11 | 15 |
respiratory system cancer | 5.84e-11 | 16 |
bronchus cancer | 6.04e-07 | 7 |
bronchogenic carcinoma | 6.04e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.