FFCP PHASE1:Hg19::chr18:55095211..55095224,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C346|description=CAGE_peak_at_chr18:55095211..55095224,+|id=chr18:55095211..55095224,+|ontology_enrichment_celltype=CL:1000415!8.02e-12!2;CL:0002150!2.19e-08!3;CL:0000861!2.19e-08!3;CL:0000167!1.98e-07!1;CL:0000164!1.98e-07!1;CL:0000502!1.98e-07!1;CL:0000172!1.98e-07!1;CL:0000173!1.98e-07!1;CL:0002351!1.98e-07!1|ontology_enrichment_celltype_v019=CL:0000167;2.05e-29;1!CL:0000164;2.05e-29;1!CL:0000502;2.05e-29;1!CL:0000172;2.05e-29;1!CL:0000173;2.05e-29;1!CL:0002535;1.91e-15;2|ontology_enrichment_celltype_v019_2=CL:0000167,3.16e-29,1;CL:0000164,3.16e-29,1;CL:0000502,3.16e-29,1;CL:0000172,3.16e-29,1;CL:0000173,3.16e-29,1;CL:0002351,3.16e-29,1;CL:0002535,1.33e-15,2|ontology_enrichment_development_v019=UBERON:0006242;7.47e-30;1!CL:0002351;2.05e-29;1|ontology_enrichment_disease=DOID:305!1.19e-13!106;DOID:4929!1.36e-12!2;DOID:0050687!1.93e-10!143;DOID:4430!1.98e-07!1|ontology_enrichment_disease_v019=DOID:4430;2.05e-29;1!DOID:4362;5.86e-07;5|ontology_enrichment_disease_v019_2=DOID:4430,3.16e-29,1;DOID:4362,5.08e-07,5|ontology_enrichment_uberon=UBERON:0001737!1.24e-50!9;UBERON:0001557!3.18e-23!19;UBERON:0002294!2.92e-20!7;UBERON:0001173!2.92e-20!7;UBERON:0004912!2.92e-20!7;UBERON:0002110!1.20e-17!3;UBERON:0006242!1.20e-17!3;UBERON:0009497!1.34e-13!25;UBERON:0000015!1.34e-13!25;UBERON:0002423!1.34e-13!25;UBERON:0006235!1.34e-13!25;UBERON:0004161!1.34e-13!25;UBERON:0001007!2.99e-13!155;UBERON:0001555!2.99e-13!155;UBERON:0007026!2.99e-13!155;UBERON:0004921!5.15e-12!129;UBERON:0004185!5.15e-12!129;UBERON:0004119!8.88e-12!169;UBERON:0000925!8.88e-12!169;UBERON:0006595!8.88e-12!169;UBERON:0008947!7.25e-11!38;UBERON:0003258!7.25e-11!38;UBERON:0001048!1.23e-10!168;UBERON:0000077!1.51e-10!130;UBERON:0001041!3.54e-10!98;UBERON:0002108!1.53e-09!14;UBERON:0000072!1.02e-08!46;UBERON:0000065!2.25e-07!53;UBERON:0001282!3.20e-07!1;UBERON:0009842!3.20e-07!1;UBERON:0003704!3.20e-07!1;UBERON:0001171!3.20e-07!1;UBERON:0001172!3.20e-07!1;UBERON:0004913!5.45e-07!1;UBERON:0003703!5.45e-07!1;UBERON:0001174!5.45e-07!1;UBERON:0004914!5.45e-07!1;UBERON:0000160!6.57e-07!27|ontology_enrichment_uberon_v019=UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0002110;6.73e-11;3!UBERON:0002114;9.43e-11;2!UBERON:0002108;5.86e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.33e-15,2;UBERON:0004801,1.33e-15,2;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0002114,1.20e-10,2;UBERON:0002108,6.77e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.55146986366197,0.653638332277218,0.474541238222193,0.943819157121151,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0.160317640503067,8.75157278431345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628776414746108,0,0,0,0,0,0|short_description=p@chr18:55095211..55095224,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_at_chr18:55095211..55095224,+ | |||
|id=chr18:55095211..55095224,+ | |||
|ontology_enrichment_celltype=CL:1000415!8.02e-12!2;CL:0002150!2.19e-08!3;CL:0000861!2.19e-08!3;CL:0000167!1.98e-07!1;CL:0000164!1.98e-07!1;CL:0000502!1.98e-07!1;CL:0000172!1.98e-07!1;CL:0000173!1.98e-07!1;CL:0002351!1.98e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.05e-29;1!CL:0000164;2.05e-29;1!CL:0000502;2.05e-29;1!CL:0000172;2.05e-29;1!CL:0000173;2.05e-29;1!CL:0002535;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.16e-29,1;CL:0000164,3.16e-29,1;CL:0000502,3.16e-29,1;CL:0000172,3.16e-29,1;CL:0000173,3.16e-29,1;CL:0002351,3.16e-29,1;CL:0002535,1.33e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.47e-30;1!CL:0002351;2.05e-29;1 | |||
|ontology_enrichment_disease=DOID:305!1.19e-13!106;DOID:4929!1.36e-12!2;DOID:0050687!1.93e-10!143;DOID:4430!1.98e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.05e-29;1!DOID:4362;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.16e-29,1;DOID:4362,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.24e-50!9;UBERON:0001557!3.18e-23!19;UBERON:0002294!2.92e-20!7;UBERON:0001173!2.92e-20!7;UBERON:0004912!2.92e-20!7;UBERON:0002110!1.20e-17!3;UBERON:0006242!1.20e-17!3;UBERON:0009497!1.34e-13!25;UBERON:0000015!1.34e-13!25;UBERON:0002423!1.34e-13!25;UBERON:0006235!1.34e-13!25;UBERON:0004161!1.34e-13!25;UBERON:0001007!2.99e-13!155;UBERON:0001555!2.99e-13!155;UBERON:0007026!2.99e-13!155;UBERON:0004921!5.15e-12!129;UBERON:0004185!5.15e-12!129;UBERON:0004119!8.88e-12!169;UBERON:0000925!8.88e-12!169;UBERON:0006595!8.88e-12!169;UBERON:0008947!7.25e-11!38;UBERON:0003258!7.25e-11!38;UBERON:0001048!1.23e-10!168;UBERON:0000077!1.51e-10!130;UBERON:0001041!3.54e-10!98;UBERON:0002108!1.53e-09!14;UBERON:0000072!1.02e-08!46;UBERON:0000065!2.25e-07!53;UBERON:0001282!3.20e-07!1;UBERON:0009842!3.20e-07!1;UBERON:0003704!3.20e-07!1;UBERON:0001171!3.20e-07!1;UBERON:0001172!3.20e-07!1;UBERON:0004913!5.45e-07!1;UBERON:0003703!5.45e-07!1;UBERON:0001174!5.45e-07!1;UBERON:0004914!5.45e-07!1;UBERON:0000160!6.57e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.91e-15;2!UBERON:0004801;1.91e-15;2!UBERON:0002110;6.73e-11;3!UBERON:0002114;9.43e-11;2!UBERON:0002108;5.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.33e-15,2;UBERON:0004801,1.33e-15,2;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0002114,1.20e-10,2;UBERON:0002108,6.77e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.55146986366197,0.653638332277218,0.474541238222193,0.943819157121151,0.784885860501384,0.38474715694639,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0.160317640503067,8.75157278431345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p@chr18:55095211..55095224,+ | |||
}} |
Revision as of 17:48, 11 September 2013
Short description: | p@chr18:55095211..55095224, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:55095211..55095224, + |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.16e-29 | 1 |
enteroendocrine cell | 3.16e-29 | 1 |
type D enteroendocrine cell | 3.16e-29 | 1 |
somatostatin secreting cell | 3.16e-29 | 1 |
pancreatic D cell | 3.16e-29 | 1 |
progenitor cell of endocrine pancreas | 3.16e-29 | 1 |
epithelial cell of cervix | 1.33e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.33e-15 | 2 |
cervix epithelium | 1.33e-15 | 2 |
gallbladder | 6.73e-11 | 3 |
gall bladder primordium | 6.73e-11 | 3 |
duodenum | 1.20e-10 | 2 |
small intestine | 6.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.16e-29 | 1 |
cervical cancer | 5.08e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.