FFCP PHASE1:Hg19::chr19:12834723..12834732,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30000|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19998|TSSclassifier=S|UniProt=O14787,Q6IN77,F5H8J7,Q4LE60|association_with_transcript=77bp_to_ENST00000425528,ENST00000441499,ENST00000546320,NM_001136195,uc002mur.2_5end|description=CAGE_peak_7_at_TNPO2_5end|id=chr19:12834723..12834732,-|ontology_enrichment_celltype=CL:0000012!2.30e-21!682;CL:0000548!1.71e-20!679;CL:0000004!1.71e-20!679;CL:0000255!1.71e-20!679;CL:0000066!2.92e-14!254;CL:0002321!1.82e-13!248;CL:0000220!3.33e-13!246;CL:0000144!1.01e-12!625;CL:0000003!1.13e-11!722;CL:0002371!2.31e-09!591;CL:0000221!2.51e-09!71;CL:0000063!1.84e-08!578;CL:0000333!1.36e-07!41;CL:0000133!4.51e-07!59|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0002321,9.53e-09,250;CL:0000066,1.17e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!1.04e-21!235;DOID:14566!1.27e-21!239;DOID:0050686!2.88e-17!137;DOID:2531!3.17e-16!51;DOID:0060083!3.17e-16!51;DOID:1240!7.61e-13!39;DOID:8692!1.09e-10!31;DOID:0050687!5.91e-07!143|ontology_enrichment_disease_v019=DOID:8692;2.63e-11;31!DOID:1240;6.64e-11;39!DOID:2531;7.34e-11;51!DOID:0060083;7.34e-11;51|ontology_enrichment_disease_v019_2=DOID:2531,4.63e-19,51;DOID:0060083,4.63e-19,51;DOID:1240,5.54e-14,39;DOID:14566,8.06e-13,239;DOID:162,2.01e-12,235;DOID:8692,3.88e-12,31;DOID:0050686,6.54e-12,137|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.81678379270557,0.856402095563933,0.704772020479856,0,0.893922188854576,0,0,1.26343974685366,0.522371256399677,3.44027511102112,2.09340350391728,1.31064823278103,0.527533956456907,0,0.331397375727916,0,0,0.730310090387373,0.975865597581014,2.33930010345897,1.42800483870977,1.25381888591235,0.85870796139317,0.958120975510189,0.87879847716362,1.75750833220288,1.88831355734875,1.73163718890094,0,0.383829398097213,0.309632246632152,4.59710612239464,3.31326510656075,1.84877005083394,1.54934401160603,1.84820002233648,2.34880351467878,0,0.200544447470142,1.08505435357926,0.447830948479849,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0,1.32171328579026,1.68152568894461,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.640456598628376,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0.566546713487831,0.383220493601921,0,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0,0.795285947051099,0,0.567208902984407,1.10864698731282,1.40535657109002,0.261958150995425,4.37154345951051,2.22470665670658,2.27183175558278,1.56716763569341,1.32957960518865,1.66943437013739,2.28797964312051,1.11437250398869,0.596287222100115,0,1.04142150482278,1.13061588384802,1.25849830862972,0,1.25396979922086,1.29208379584664,1.06729878806013,0.33472061276467,0.402829317109147,0,0.24406205754817,1.10298924103761,0.81014194788176,0.446498641420399,0.44905874525234,0.788280363383256,1.53316637465883,0.949265659568129,0.732806975721629,0,0,1.3082821564276,1.49091585508596,0.379891534993739,3.04541115870403,0.573673241497627,0,0,0,0.74000264525148,0.622422070799533,0.67355336034844,1.9615428373615,0.302714855289863,0.576175924479999,0.937285727335186,0.624320153660641,1.1409436430889,0.896692083310806,1.05691048779388,0.647491777472526,1.12360645361799,0.408308342509787,0.491337269247072,0.103325781175765,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.625592599359821,0.554128230968366,0,0.30648779579902,0.300476117813194,0.680593098960126,1.4351170855109,0.213557388818567,0.423863802319124,2.10063767259082,0.618315175430633,0.515281080091258,0.744467425326359,1.5189869901714,0.584622030967192,0.757301322732344,0.276149695926898,0.484938170456436,0.355009592516614,0.403008392910561,1.18692414617341,1.73934767846967,3.81844568827169,2.00763216772303,1.09776335516636,1.06023814657188,1.16193942869518,0.932949495138334,0.504641701751257,1.82488679537915,1.56449532329816,0,0,0,0,0.946454400318751,0.674338760312407,1.20505514941741,1.54411561825352,1.30727666455444,0.949082476444386,1.48314438976181,0.784885860501384,0.769494313892781,1.4763109092493,0,0.4115740113314,2.94017422771084,0,0.982827216677626,0,3.5317047953172,0.491953754172454,1.3725424823882,4.60951198716227,1.1240175325762,1.10581869652794,1.38882667737794,1.95484983186195,1.03993478527958,0,0.115930404975077,0.821860859650752,0.721832238805369,0,0.761016608938393,2.37061319387782,0,0.492434012174795,0.702012795417713,0.594524649154913,0.93733833986777,1.17587489739202,0.992425680696705,1.34337784054272,1.16253575405585,0,0,0.264145302039678,0.207328115540772,0.144119953416961,0.12624243342638,1.7144431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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30000 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19998 | |||
|TSSclassifier=S | |||
|UniProt=O14787,Q6IN77,F5H8J7,Q4LE60 | |||
|association_with_transcript=77bp_to_ENST00000425528,ENST00000441499,ENST00000546320,NM_001136195,uc002mur.2_5end | |||
|description=CAGE_peak_7_at_TNPO2_5end | |||
|id=chr19:12834723..12834732,- | |||
|ontology_enrichment_celltype=CL:0000012!2.30e-21!682;CL:0000548!1.71e-20!679;CL:0000004!1.71e-20!679;CL:0000255!1.71e-20!679;CL:0000066!2.92e-14!254;CL:0002321!1.82e-13!248;CL:0000220!3.33e-13!246;CL:0000144!1.01e-12!625;CL:0000003!1.13e-11!722;CL:0002371!2.31e-09!591;CL:0000221!2.51e-09!71;CL:0000063!1.84e-08!578;CL:0000333!1.36e-07!41;CL:0000133!4.51e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.53e-09,250;CL:0000066,1.17e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.04e-21!235;DOID:14566!1.27e-21!239;DOID:0050686!2.88e-17!137;DOID:2531!3.17e-16!51;DOID:0060083!3.17e-16!51;DOID:1240!7.61e-13!39;DOID:8692!1.09e-10!31;DOID:0050687!5.91e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.63e-11;31!DOID:1240;6.64e-11;39!DOID:2531;7.34e-11;51!DOID:0060083;7.34e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.63e-19,51;DOID:0060083,4.63e-19,51;DOID:1240,5.54e-14,39;DOID:14566,8.06e-13,239;DOID:162,2.01e-12,235;DOID:8692,3.88e-12,31;DOID:0050686,6.54e-12,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p7@TNPO2 | |||
}} |
Revision as of 18:47, 11 September 2013
Short description: | p7@TNPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TNPO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000425528, ENST00000441499, ENST00000546320, NM_001136195, uc002mur.2_5end |
EntrezGene: | TNPO2 |
HGNC: | 19998 |
UniProt: | O14787Q6IN77F5H8J7Q4LE60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.53e-09 | 250 |
epithelial cell | 1.17e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.63e-19 | 51 |
immune system cancer | 4.63e-19 | 51 |
leukemia | 5.54e-14 | 39 |
disease of cellular proliferation | 8.06e-13 | 239 |
cancer | 2.01e-12 | 235 |
myeloid leukemia | 3.88e-12 | 31 |
organ system cancer | 6.54e-12 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.