FFCP PHASE1:Hg19::chr1:108231035..108231046,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10451|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12659|TSSclassifier=S|UniProt=F5GXH7|association_with_transcript=79bp_to_ENST00000544443,uc010ouv.1_5end|description=CAGE_peak_7_at_VAV3_5end|id=chr1:108231035..108231046,-|ontology_enrichment_celltype=CL:0000066!1.05e-11!254;CL:0002150!1.70e-08!3;CL:0000861!1.70e-08!3;CL:0002541!2.28e-08!3;CL:0000223!2.18e-07!59|ontology_enrichment_celltype_v019=CL:0002541;6.06e-19;3!CL:0000313;1.97e-14;1!CL:0000159;7.27e-08;2|ontology_enrichment_celltype_v019_2=CL:0002541,6.63e-19,3;CL:0000313,2.75e-14,1;CL:0000159,8.60e-08,2|ontology_enrichment_development_v019=UBERON:0008425;4.72e-15;1!UBERON:0008814;4.53e-08;2!UBERON:0010056;4.53e-08;2|ontology_enrichment_disease=DOID:305!7.22e-24!106;DOID:0050687!4.13e-16!143;DOID:299!1.26e-11!25;DOID:1749!4.56e-10!14;DOID:162!7.62e-09!235;DOID:14566!1.93e-08!239;DOID:7!9.65e-08!39;DOID:5093!8.88e-07!4;DOID:1612!8.88e-07!4|ontology_enrichment_disease_v019=DOID:5093;1.46e-14;4!DOID:1612;1.46e-14;4!DOID:178;1.97e-14;1!DOID:326;1.97e-14;1!DOID:3978;1.97e-14;1!DOID:3394;1.97e-14;1!DOID:2152;1.97e-14;1!DOID:5844;1.97e-14;1!DOID:299;3.80e-13;25!DOID:114;7.27e-08;2!DOID:4468;7.27e-08;2|ontology_enrichment_disease_v019_2=DOID:5093,1.23e-14,4;DOID:1612,1.23e-14,4;DOID:178,2.41e-14,1;DOID:326,2.41e-14,1;DOID:3978,2.41e-14,1;DOID:3394,2.41e-14,1;DOID:5844,2.41e-14,1;DOID:2152,2.75e-14,1;DOID:299,3.22e-13,25;DOID:4468,7.03e-08,2;DOID:114,8.04e-08,2|ontology_enrichment_uberon=UBERON:0004119!5.55e-09!169;UBERON:0000925!5.55e-09!169;UBERON:0006595!5.55e-09!169;UBERON:0000476!2.28e-08!3;UBERON:0000920!2.28e-08!3;UBERON:0003729!5.03e-08!5;UBERON:0001007!1.24e-07!155;UBERON:0001555!1.24e-07!155;UBERON:0007026!1.24e-07!155;UBERON:0000065!2.73e-07!53;UBERON:0001004!5.99e-07!72;UBERON:0004921!8.70e-07!129;UBERON:0004185!8.70e-07!129;UBERON:0000344!9.74e-07!12|ontology_enrichment_uberon_v019=UBERON:0003124;6.06e-19;3!UBERON:0000920;6.06e-19;3!UBERON:0001723;1.14e-18;3!UBERON:0001033;1.14e-18;3!UBERON:0004911;1.97e-14;1!UBERON:0000341;7.27e-08;2!UBERON:0004909;7.27e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.63e-19,3;UBERON:0001723,1.62e-18,3;UBERON:0001033,1.62e-18,3;UBERON:0010056,1.62e-18,3;UBERON:0004911,2.75e-14,1;UBERON:0003124,1.22e-08,7;UBERON:0000341,6.58e-08,2;UBERON:0004909,8.60e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.473107245101804,0.234282829985426,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3438498497671,4.28553999981359,0,0.1137934482855,0,2.12748913591143,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.230850775511391,0,0,0,0,2.23300811812344,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0.685946781900644,0.435296032902013,0.34945333648406,0,0.967563312890852,0.877071805034227,0.739039113478883,0.678923115418936,0,0,0,0,0,0.195551382734803,0,0,1.79828648623917,0.432271251462318,0,0,0,0,0,0,0,0.917983958726896,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0.393915911536118,0.412079291905832,0.404421263125109,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.86686278029118,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30617366729152,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.70781834008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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10451 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12659 | |||
|TSSclassifier=S | |||
|UniProt=F5GXH7 | |||
|association_with_transcript=79bp_to_ENST00000544443,uc010ouv.1_5end | |||
|description=CAGE_peak_7_at_VAV3_5end | |||
|id=chr1:108231035..108231046,- | |||
|ontology_enrichment_celltype=CL:0000066!1.05e-11!254;CL:0002150!1.70e-08!3;CL:0000861!1.70e-08!3;CL:0002541!2.28e-08!3;CL:0000223!2.18e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.06e-19;3!CL:0000313;1.97e-14;1!CL:0000159;7.27e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.63e-19,3;CL:0000313,2.75e-14,1;CL:0000159,8.60e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;4.72e-15;1!UBERON:0008814;4.53e-08;2!UBERON:0010056;4.53e-08;2 | |||
|ontology_enrichment_disease=DOID:305!7.22e-24!106;DOID:0050687!4.13e-16!143;DOID:299!1.26e-11!25;DOID:1749!4.56e-10!14;DOID:162!7.62e-09!235;DOID:14566!1.93e-08!239;DOID:7!9.65e-08!39;DOID:5093!8.88e-07!4;DOID:1612!8.88e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.46e-14;4!DOID:1612;1.46e-14;4!DOID:178;1.97e-14;1!DOID:326;1.97e-14;1!DOID:3978;1.97e-14;1!DOID:3394;1.97e-14;1!DOID:2152;1.97e-14;1!DOID:5844;1.97e-14;1!DOID:299;3.80e-13;25!DOID:114;7.27e-08;2!DOID:4468;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.23e-14,4;DOID:1612,1.23e-14,4;DOID:178,2.41e-14,1;DOID:326,2.41e-14,1;DOID:3978,2.41e-14,1;DOID:3394,2.41e-14,1;DOID:5844,2.41e-14,1;DOID:2152,2.75e-14,1;DOID:299,3.22e-13,25;DOID:4468,7.03e-08,2;DOID:114,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.55e-09!169;UBERON:0000925!5.55e-09!169;UBERON:0006595!5.55e-09!169;UBERON:0000476!2.28e-08!3;UBERON:0000920!2.28e-08!3;UBERON:0003729!5.03e-08!5;UBERON:0001007!1.24e-07!155;UBERON:0001555!1.24e-07!155;UBERON:0007026!1.24e-07!155;UBERON:0000065!2.73e-07!53;UBERON:0001004!5.99e-07!72;UBERON:0004921!8.70e-07!129;UBERON:0004185!8.70e-07!129;UBERON:0000344!9.74e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.06e-19;3!UBERON:0000920;6.06e-19;3!UBERON:0001723;1.14e-18;3!UBERON:0001033;1.14e-18;3!UBERON:0004911;1.97e-14;1!UBERON:0000341;7.27e-08;2!UBERON:0004909;7.27e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.63e-19,3;UBERON:0001723,1.62e-18,3;UBERON:0001033,1.62e-18,3;UBERON:0010056,1.62e-18,3;UBERON:0004911,2.75e-14,1;UBERON:0003124,1.22e-08,7;UBERON:0000341,6.58e-08,2;UBERON:0004909,8.60e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.473107245101804,0.234282829985426,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3438498497671,4.28553999981359,0,0.1137934482855,0,2.12748913591143,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.230850775511391,0,0,0,0,2.23300811812344,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,1.46909527343233,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0.103688191397247,0,0,0,0,1.70765727617876,0,0,0.685946781900644,0.435296032902013,0.34945333648406,0,0.967563312890852,0.877071805034227,0.739039113478883,0.678923115418936,0,0,0,0,0,0.195551382734803,0,0,1.79828648623917,0.432271251462318,0,0,0,0,0,0,0,0.917983958726896,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0.393915911536118,0.412079291905832,0.404421263125109,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0.86686278029118,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30617366729152,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.707818340086442,0.917142992608395,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0.9555033757741,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,1.11855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0,0,0,0,0,0,2.17716747896961,1.02669990325584,0.875576689189638,0.78894425931944,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@VAV3 | |||
}} |
Revision as of 23:16, 11 September 2013
Short description: | p7@VAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_VAV3_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_ENST00000544443, uc010ouv.1_5end |
EntrezGene: | VAV3 |
HGNC: | 12659 |
UniProt: | F5GXH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.63e-19 | 3 |
serous secreting cell | 2.75e-14 | 1 |
seromucus secreting cell | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.63e-19 | 3 |
tongue | 1.62e-18 | 3 |
gustatory system | 1.62e-18 | 3 |
future tongue | 1.62e-18 | 3 |
epithelium of female gonad | 2.75e-14 | 1 |
chorion | 1.22e-08 | 7 |
throat | 6.58e-08 | 2 |
epithelium of gonad | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.23e-14 | 4 |
breast cancer | 1.23e-14 | 4 |
vascular disease | 2.41e-14 | 1 |
ischemia | 2.41e-14 | 1 |
extrinsic cardiomyopathy | 2.41e-14 | 1 |
myocardial ischemia | 2.41e-14 | 1 |
myocardial infarction | 2.41e-14 | 1 |
ovary epithelial cancer | 2.75e-14 | 1 |
adenocarcinoma | 3.22e-13 | 25 |
clear cell adenocarcinoma | 7.03e-08 | 2 |
heart disease | 8.04e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.