FFCP PHASE1:Hg19::chr1:176210734..176210762,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:176210734..176210762,+|id=chr1:176210734..176210762,+|ontology_enrichment_celltype=CL:0000548!1.84e-12!679;CL:0000004!1.84e-12!679;CL:0000255!1.84e-12!679;CL:0000012!4.24e-12!682;CL:0000003!1.25e-08!722;CL:0000055!1.42e-08!180|ontology_enrichment_celltype_v019=CL:0000244;1.13e-09;4!CL:0000731;1.13e-09;4!CL:0002573;6.06e-08;2|ontology_enrichment_celltype_v019_2=CL:0000244,1.23e-09,4;CL:0000731,1.23e-09,4;CL:0002573,7.37e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;2.45e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,2.96e-07,14|ontology_enrichment_uberon=UBERON:0004458!3.24e-08!49;UBERON:0002323!5.61e-08!46;UBERON:0000991!1.66e-07!21;UBERON:0009196!1.66e-07!21;UBERON:0009117!1.66e-07!21;UBERON:0005564!1.66e-07!21;UBERON:0004176!6.16e-07!22|ontology_enrichment_uberon_v019=UBERON:0000365;9.97e-08;5!UBERON:0000991;1.09e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.07e-07,5;UBERON:0000991,1.11e-07,21;UBERON:0009196,1.11e-07,21;UBERON:0009117,1.11e-07,21;UBERON:0005564,1.11e-07,21;UBERON:0002323,1.18e-07,46;UBERON:0004176,3.00e-07,22;UBERON:0004458,5.59e-07,49|phase1_expression=0.363356758541113,0,1.12763523276777,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,2.00535164254356,0.434539556882471,0.795285947051099,0.486634870302636,0,0.221729397462564,0,0,0,0.370784442784429,0,0,0,0,0,0,0.993812036833525,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,2.98183171017191,1.01304409331664,1.72131935057184,5.16305917347865,0.354668382198357,0,0,0.98667019366864,0,1.0776853765575,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0.352303495931295,0.485618833104395,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.538168907066586,0.213557388818567,0,0.300091096084402,0.309157587715317,1.54584324027377,0.37223371266318,2.70042131586026,0.68205903612839,0.757301322732344,0.920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0.272746120590835,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,1.75600456653801,0,0.904760751704678,0.185176890317059,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.806026704325635,3.77824120068151,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0.531876233169741,2.08014873822732,0,0,0,0.428933980974443,0,0,0,0,0,2.41151501647669,1.74306691720059,0.199945982364114,0,0,0,1.91699884393266,1.14861935834114,0,0.289562613335158,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.535286966391485,0.630809660135739,0.702848489956279,1.80567659836631,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,2.72918588600655,1.68808170616869,0.561320188866147,2.56278298511402,0,0.482561763430822,1.48418066444991,0,0,0.0821271560138091,0,0,0,0,1.74953878978203,0.574072240823034,0,0,0,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.976135183992909,0,1.28197250745681,2.0627374980147,0.574265537996172,1.95018073810956,4.82051789532479,1.93341436584244,0,0,0.275673144969061,0.537101224341368,0,0.170453254832202,0.979352392114111,2.14870389969272,1.34533047155574,0.255225424989168,0.2023155617111,1.39453664789186,10.0739950985805,0,0.616067160352178,0,0,1.29726953372744,2.28999818787186,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0.117812402345686,0.808729926293264,0,1.26377536871694,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0.143411352204052,0.196498082026242,0.7133421029625,0.709522128141196,0.211107635297664,0.329294892959902,0,0,3.46399605811843,0,1.08890984861323,0,4.3050537267123,3.36942951335251,1.7737206141467,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69338866179106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.57077028676375,0,0,0,0,0,6.03385226762713,0,1.86623752597084,0.269605053441981,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0.139423744278603,0,0.569710279235006,0,0,0,0,0.457987967009312,0,0,0,0,0.225595660617181,0,0,0,0.158936578980379,0.632994193584081,0.163232808159148,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:176210734..176210762,+ | |||
|id=chr1:176210734..176210762,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.84e-12!679;CL:0000004!1.84e-12!679;CL:0000255!1.84e-12!679;CL:0000012!4.24e-12!682;CL:0000003!1.25e-08!722;CL:0000055!1.42e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.13e-09;4!CL:0000731;1.13e-09;4!CL:0002573;6.06e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.23e-09,4;CL:0000731,1.23e-09,4;CL:0002573,7.37e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.45e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.96e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004458!3.24e-08!49;UBERON:0002323!5.61e-08!46;UBERON:0000991!1.66e-07!21;UBERON:0009196!1.66e-07!21;UBERON:0009117!1.66e-07!21;UBERON:0005564!1.66e-07!21;UBERON:0004176!6.16e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.97e-08;5!UBERON:0000991;1.09e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.07e-07,5;UBERON:0000991,1.11e-07,21;UBERON:0009196,1.11e-07,21;UBERON:0009117,1.11e-07,21;UBERON:0005564,1.11e-07,21;UBERON:0002323,1.18e-07,46;UBERON:0004176,3.00e-07,22;UBERON:0004458,5.59e-07,49 | |||
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| |||
|short_description=p@chr1:176210734..176210762,+ | |||
}} |
Revision as of 01:57, 12 September 2013
Short description: | p@chr1:176210734..176210762, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:176210734..176210762, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.23e-09 | 4 |
urothelial cell | 1.23e-09 | 4 |
Schwann cell | 7.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.07e-07 | 5 |
gonad | 1.11e-07 | 21 |
indifferent external genitalia | 1.11e-07 | 21 |
indifferent gonad | 1.11e-07 | 21 |
gonad primordium | 1.11e-07 | 21 |
body cavity | 1.18e-07 | 46 |
external genitalia | 3.00e-07 | 22 |
body cavity or lining | 5.59e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.96e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.