FFCP PHASE1:Hg19::chr1:177939071..177939080,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89866|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30301|TSSclassifier=S|UniProt=|association_with_transcript=-14bp_to_ENST00000486567_5end|coexpression_cluster_id=C25|description=CAGE_peak_15_at_SEC16B_5end|id=chr1:177939071..177939080,-|ontology_enrichment_celltype=CL:0000181!3.86e-11!12;CL:0000417!3.86e-11!12;CL:0000668!3.86e-11!12;CL:0000414!3.86e-11!12;CL:0000412!3.86e-11!12;CL:0000182!3.86e-11!12|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3493!2.00e-08!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.98e-18!27;UBERON:0005409!3.79e-14!35;UBERON:0002107!3.49e-12!19;UBERON:0006925!3.49e-12!19;UBERON:0008836!3.49e-12!19;UBERON:0008835!1.47e-10!22;UBERON:0003894!1.47e-10!22;UBERON:0009854!4.11e-10!23;UBERON:0004921!6.03e-10!129;UBERON:0004185!6.03e-10!129;UBERON:0007499!2.53e-09!25;UBERON:0009497!2.53e-09!25;UBERON:0000015!2.53e-09!25;UBERON:0002423!2.53e-09!25;UBERON:0006235!2.53e-09!25;UBERON:0004161!2.53e-09!25;UBERON:0002108!2.71e-09!14;UBERON:0005057!5.64e-09!26;UBERON:0009856!5.64e-09!26;UBERON:0001007!4.22e-08!155;UBERON:0001555!4.22e-08!155;UBERON:0007026!4.22e-08!155;UBERON:0002365!1.46e-07!31;UBERON:0002330!1.46e-07!31;UBERON:0001155!2.22e-07!9;UBERON:0004119!2.44e-07!169;UBERON:0000925!2.44e-07!169;UBERON:0006595!2.44e-07!169|ontology_enrichment_uberon_v019=UBERON:0002108;2.51e-53;4!UBERON:0000160;8.86e-34;17!UBERON:0005409;1.01e-26;22!UBERON:0002114;3.66e-23;2!UBERON:0004921;1.93e-16;33!UBERON:0001555;5.34e-09;54!UBERON:0001155;1.16e-08;9!UBERON:0000059;2.55e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.87e-53,4;UBERON:0000160,8.86e-34,17;UBERON:0005409,8.76e-24,25;UBERON:0002114,4.09e-23,2;UBERON:0001155,1.12e-08,9;UBERON:0000059,2.47e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,3.6271854310734,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p15@SEC16B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=89866 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30301 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000486567_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_15_at_SEC16B_5end | |||
|id=chr1:177939071..177939080,- | |||
|ontology_enrichment_celltype=CL:0000181!3.86e-11!12;CL:0000417!3.86e-11!12;CL:0000668!3.86e-11!12;CL:0000414!3.86e-11!12;CL:0000412!3.86e-11!12;CL:0000182!3.86e-11!12 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!2.00e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.98e-18!27;UBERON:0005409!3.79e-14!35;UBERON:0002107!3.49e-12!19;UBERON:0006925!3.49e-12!19;UBERON:0008836!3.49e-12!19;UBERON:0008835!1.47e-10!22;UBERON:0003894!1.47e-10!22;UBERON:0009854!4.11e-10!23;UBERON:0004921!6.03e-10!129;UBERON:0004185!6.03e-10!129;UBERON:0007499!2.53e-09!25;UBERON:0009497!2.53e-09!25;UBERON:0000015!2.53e-09!25;UBERON:0002423!2.53e-09!25;UBERON:0006235!2.53e-09!25;UBERON:0004161!2.53e-09!25;UBERON:0002108!2.71e-09!14;UBERON:0005057!5.64e-09!26;UBERON:0009856!5.64e-09!26;UBERON:0001007!4.22e-08!155;UBERON:0001555!4.22e-08!155;UBERON:0007026!4.22e-08!155;UBERON:0002365!1.46e-07!31;UBERON:0002330!1.46e-07!31;UBERON:0001155!2.22e-07!9;UBERON:0004119!2.44e-07!169;UBERON:0000925!2.44e-07!169;UBERON:0006595!2.44e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.51e-53;4!UBERON:0000160;8.86e-34;17!UBERON:0005409;1.01e-26;22!UBERON:0002114;3.66e-23;2!UBERON:0004921;1.93e-16;33!UBERON:0001555;5.34e-09;54!UBERON:0001155;1.16e-08;9!UBERON:0000059;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.87e-53,4;UBERON:0000160,8.86e-34,17;UBERON:0005409,8.76e-24,25;UBERON:0002114,4.09e-23,2;UBERON:0001155,1.12e-08,9;UBERON:0000059,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,3.6271854310734,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@SEC16B | |||
}} |
Revision as of 01:59, 12 September 2013
Short description: | p15@SEC16B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_SEC16B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -14bp_to_ENST00000486567_5end |
EntrezGene: | SEC16B |
HGNC: | 30301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.87e-53 | 4 |
intestine | 8.86e-34 | 17 |
gastrointestinal system | 8.76e-24 | 25 |
duodenum | 4.09e-23 | 2 |
colon | 1.12e-08 | 9 |
large intestine | 2.47e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.