FFCP PHASE1:Hg19::chr1:196577836..196577845,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=343450|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18866|TSSclassifier=W|UniProt=|association_with_transcript=-295bp_to_ENST00000367431,ENST00000367433_5end|description=CAGE_peak_7_at_KCNT2_5end|id=chr1:196577836..196577845,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000333;4.32e-11;5!CL:0000047;1.54e-07;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;2.16e-09;6!DOID:3307;1.54e-07;2|ontology_enrichment_disease_v019_2=DOID:169,1.83e-09,6;DOID:3307,9.87e-08,2|ontology_enrichment_uberon=UBERON:0000073!2.74e-27!94;UBERON:0001016!2.74e-27!94;UBERON:0005743!3.75e-26!86;UBERON:0001017!1.24e-24!82;UBERON:0002020!1.34e-23!34;UBERON:0003528!1.34e-23!34;UBERON:0003075!3.19e-23!86;UBERON:0007284!3.19e-23!86;UBERON:0001893!6.95e-23!34;UBERON:0002791!3.55e-22!33;UBERON:0001049!3.78e-22!57;UBERON:0005068!3.78e-22!57;UBERON:0006241!3.78e-22!57;UBERON:0007135!3.78e-22!57;UBERON:0001869!1.69e-21!32;UBERON:0007023!1.87e-21!115;UBERON:0002346!1.91e-21!90;UBERON:0002616!1.54e-20!59;UBERON:0000956!1.11e-19!25;UBERON:0000203!1.11e-19!25;UBERON:0002619!4.30e-19!22;UBERON:0002780!4.35e-19!41;UBERON:0001890!4.35e-19!41;UBERON:0006240!4.35e-19!41;UBERON:0000955!8.24e-19!69;UBERON:0006238!8.24e-19!69;UBERON:0004121!8.95e-19!169;UBERON:0003080!2.11e-18!42;UBERON:0003056!7.14e-18!61;UBERON:0000924!7.78e-18!173;UBERON:0006601!7.78e-18!173;UBERON:0000153!3.93e-17!129;UBERON:0007811!3.93e-17!129;UBERON:0001950!4.93e-17!20;UBERON:0000033!1.59e-15!123;UBERON:0000025!1.58e-13!194;UBERON:0000119!4.77e-13!312;UBERON:0000483!7.19e-13!309;UBERON:0000477!4.82e-12!286;UBERON:0000481!2.16e-11!347;UBERON:0004111!5.02e-11!241;UBERON:0000064!9.31e-11!219;UBERON:0000475!2.86e-10!365;UBERON:0000922!9.25e-10!612;UBERON:0000468!9.08e-09!659;UBERON:0000923!1.32e-08!604;UBERON:0005291!1.32e-08!604;UBERON:0006598!1.32e-08!604;UBERON:0002532!1.32e-08!604;UBERON:0002050!1.58e-08!605;UBERON:0005423!1.58e-08!605;UBERON:0000467!7.48e-08!625;UBERON:0000480!8.87e-08!626;UBERON:0001871!9.56e-07!7;UBERON:0000062!9.69e-07!511|ontology_enrichment_uberon_v019=UBERON:0007195;8.55e-14;1!UBERON:0000013;4.32e-11;5!UBERON:0002410;4.32e-11;5!UBERON:0003127;1.54e-07;2!UBERON:0000922;3.33e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.07e-13,1;UBERON:0000013,3.54e-11,5;UBERON:0002410,3.54e-11,5;UBERON:0003127,1.36e-07,2|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.665188192387692,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27047312111232,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512556597022804,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.744316738719335,0.632758849437452,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.796991953004279,0,0.503865495708552,0,0,0.311039587661807,0,0,0,0.197286811273867,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,1.71594997861965,0,0,0,0,0,0,0.28895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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=343450 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18866 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-295bp_to_ENST00000367431,ENST00000367433_5end | |||
|description=CAGE_peak_7_at_KCNT2_5end | |||
|id=chr1:196577836..196577845,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.32e-11;5!CL:0000047;1.54e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.16e-09;6!DOID:3307;1.54e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.83e-09,6;DOID:3307,9.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.74e-27!94;UBERON:0001016!2.74e-27!94;UBERON:0005743!3.75e-26!86;UBERON:0001017!1.24e-24!82;UBERON:0002020!1.34e-23!34;UBERON:0003528!1.34e-23!34;UBERON:0003075!3.19e-23!86;UBERON:0007284!3.19e-23!86;UBERON:0001893!6.95e-23!34;UBERON:0002791!3.55e-22!33;UBERON:0001049!3.78e-22!57;UBERON:0005068!3.78e-22!57;UBERON:0006241!3.78e-22!57;UBERON:0007135!3.78e-22!57;UBERON:0001869!1.69e-21!32;UBERON:0007023!1.87e-21!115;UBERON:0002346!1.91e-21!90;UBERON:0002616!1.54e-20!59;UBERON:0000956!1.11e-19!25;UBERON:0000203!1.11e-19!25;UBERON:0002619!4.30e-19!22;UBERON:0002780!4.35e-19!41;UBERON:0001890!4.35e-19!41;UBERON:0006240!4.35e-19!41;UBERON:0000955!8.24e-19!69;UBERON:0006238!8.24e-19!69;UBERON:0004121!8.95e-19!169;UBERON:0003080!2.11e-18!42;UBERON:0003056!7.14e-18!61;UBERON:0000924!7.78e-18!173;UBERON:0006601!7.78e-18!173;UBERON:0000153!3.93e-17!129;UBERON:0007811!3.93e-17!129;UBERON:0001950!4.93e-17!20;UBERON:0000033!1.59e-15!123;UBERON:0000025!1.58e-13!194;UBERON:0000119!4.77e-13!312;UBERON:0000483!7.19e-13!309;UBERON:0000477!4.82e-12!286;UBERON:0000481!2.16e-11!347;UBERON:0004111!5.02e-11!241;UBERON:0000064!9.31e-11!219;UBERON:0000475!2.86e-10!365;UBERON:0000922!9.25e-10!612;UBERON:0000468!9.08e-09!659;UBERON:0000923!1.32e-08!604;UBERON:0005291!1.32e-08!604;UBERON:0006598!1.32e-08!604;UBERON:0002532!1.32e-08!604;UBERON:0002050!1.58e-08!605;UBERON:0005423!1.58e-08!605;UBERON:0000467!7.48e-08!625;UBERON:0000480!8.87e-08!626;UBERON:0001871!9.56e-07!7;UBERON:0000062!9.69e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;8.55e-14;1!UBERON:0000013;4.32e-11;5!UBERON:0002410;4.32e-11;5!UBERON:0003127;1.54e-07;2!UBERON:0000922;3.33e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.07e-13,1;UBERON:0000013,3.54e-11,5;UBERON:0002410,3.54e-11,5;UBERON:0003127,1.36e-07,2 | |||
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|short_description=p7@KCNT2 | |||
}} |
Revision as of 02:32, 12 September 2013
Short description: | p7@KCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_KCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -295bp_to_ENST00000367431, ENST00000367433_5end |
EntrezGene: | KCNT2 |
HGNC: | 18866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.07e-13 | 1 |
sympathetic nervous system | 3.54e-11 | 5 |
autonomic nervous system | 3.54e-11 | 5 |
open tracheal system trachea | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.83e-09 | 6 |
teratoma | 9.87e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.