FFCP PHASE1:Hg19::chr1:78512168..78512171,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:78512168..78512171,- | |||
|id=chr1:78512168..78512171,- | |||
|ontology_enrichment_celltype=CL:0002618!1.04e-20!3;CL:0002139!1.37e-20!24;CL:0000071!5.31e-17!18;CL:0002546!5.31e-17!18;CL:0000115!1.20e-13!35;CL:0002543!1.31e-10!6;CL:0002078!1.50e-10!44;CL:0000213!8.32e-08!57;CL:0000215!8.32e-08!57;CL:1000413!5.04e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002618;8.98e-131;3!CL:0002543;2.83e-66;6!CL:0000071;3.88e-23;18!CL:0002139;1.03e-17;24!CL:0000115;1.53e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,8.98e-131,3;CL:0002543,2.83e-66,6;CL:0000071,3.88e-23,18;CL:0002546,3.88e-23,18;CL:0002139,1.03e-17,24;CL:0000115,2.91e-12,36;CL:0002078,4.55e-10,45;CL:0000213,4.33e-08,58;CL:0000215,4.33e-08,58;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;3.88e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.31e-17!18;UBERON:0004638!5.31e-17!18;UBERON:0004852!5.31e-17!18;UBERON:0000487!9.48e-14!22;UBERON:0002066!1.23e-12!5;UBERON:0006914!5.42e-12!25;UBERON:0002106!5.57e-09!3;UBERON:0004854!5.57e-09!3;UBERON:0009034!5.57e-09!3;UBERON:0002095!5.57e-09!3;UBERON:0004782!5.57e-09!3;UBERON:0003281!5.57e-09!3;UBERON:0009664!5.57e-09!3;UBERON:0002296!5.57e-09!3;UBERON:0005602!5.57e-09!3;UBERON:0001179!5.57e-09!3;UBERON:0006293!5.57e-09!3;UBERON:0004872!1.14e-08!84;UBERON:0002426!4.89e-08!1;UBERON:0003831!4.89e-08!1;UBERON:0003898!4.89e-08!1;UBERON:0004830!4.89e-08!1;UBERON:0001774!4.89e-08!1;UBERON:0003830!4.89e-08!1;UBERON:0005175!4.89e-08!1;UBERON:0003897!4.89e-08!1;UBERON:0001103!4.89e-08!1;UBERON:0010084!4.89e-08!1;UBERON:0002135!8.28e-08!1;UBERON:0000055!1.10e-07!69;UBERON:0000945!2.35e-07!8;UBERON:0010039!2.35e-07!8;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1;UBERON:0001638!3.26e-07!9;UBERON:0003920!3.26e-07!9;UBERON:0004582!3.26e-07!9;UBERON:0003915!5.04e-07!9;UBERON:0004700!5.04e-07!9;UBERON:0001917!5.04e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;3.49e-79;5!UBERON:0001638;9.75e-45;9!UBERON:0010260;9.75e-45;9!UBERON:0003920;9.75e-45;9!UBERON:0004582;9.75e-45;9!UBERON:0004638;3.88e-23;18!UBERON:0001986;3.88e-23;18!UBERON:0004852;3.88e-23;18!UBERON:0000487;3.41e-19;22!UBERON:0006914;4.64e-17;25!UBERON:0000490;1.77e-12;33!UBERON:0007500;8.24e-08;56!UBERON:0001981;8.24e-08;56!UBERON:0004537;8.24e-08;56!UBERON:0003914;7.94e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,3.49e-79,5;UBERON:0001638,9.75e-45,9;UBERON:0010260,9.75e-45,9;UBERON:0003920,9.75e-45,9;UBERON:0004582,9.75e-45,9;UBERON:0004638,3.88e-23,18;UBERON:0001986,3.88e-23,18;UBERON:0004852,3.88e-23,18;UBERON:0000487,3.41e-19,22;UBERON:0006914,4.64e-17,25;UBERON:0007500,5.66e-08,59;UBERON:0001981,5.66e-08,59;UBERON:0004537,5.66e-08,59;UBERON:0006965,5.66e-08,59;UBERON:0000055,4.47e-07,68 | |||
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|short_description=p@chr1:78512168..78512171,- | |||
}} |
Revision as of 06:49, 12 September 2013
Short description: | p@chr1:78512168..78512171, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:78512168..78512171, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 8.98e-131 | 3 |
vein endothelial cell | 2.83e-66 | 6 |
blood vessel endothelial cell | 3.88e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.88e-23 | 18 |
endothelial cell of vascular tree | 1.03e-17 | 24 |
endothelial cell | 2.91e-12 | 36 |
meso-epithelial cell | 4.55e-10 | 45 |
lining cell | 4.33e-08 | 58 |
barrier cell | 4.33e-08 | 58 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 3.49e-79 | 5 |
vein | 9.75e-45 | 9 |
umbilical blood vessel | 9.75e-45 | 9 |
venous blood vessel | 9.75e-45 | 9 |
venous system | 9.75e-45 | 9 |
blood vessel endothelium | 3.88e-23 | 18 |
endothelium | 3.88e-23 | 18 |
cardiovascular system endothelium | 3.88e-23 | 18 |
simple squamous epithelium | 3.41e-19 | 22 |
squamous epithelium | 4.64e-17 | 25 |
epithelial tube open at both ends | 5.66e-08 | 59 |
blood vessel | 5.66e-08 | 59 |
blood vasculature | 5.66e-08 | 59 |
vascular cord | 5.66e-08 | 59 |
vessel | 4.47e-07 | 68 |
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