FFCP PHASE1:Hg19::chr20:10413435..10413438,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr20:10413435..10413438,-|id=chr20:10413435..10413438,-|ontology_enrichment_celltype=CL:0000839!1.45e-09!70;CL:0002194!1.58e-09!63;CL:0000576!1.58e-09!63;CL:0000040!1.58e-09!63;CL:0000559!1.58e-09!63;CL:0002009!2.25e-09!65;CL:0000557!1.21e-08!71;CL:0000860!1.89e-07!45|ontology_enrichment_celltype_v019=CL:0000511;8.93e-20;1!CL:0002625;8.93e-20;1!CL:0000216;8.93e-20;1!CL:0000047;2.37e-10;2!CL:0002619;2.55e-07;3!CL:0000346;2.55e-07;3!CL:1000428;2.55e-07;3!CL:0002231;2.55e-07;3|ontology_enrichment_celltype_v019_2=CL:0000511,8.95e-20,1;CL:0002625,8.95e-20,1;CL:0000216,8.95e-20,1;CL:0000346,2.05e-07,3;CL:1000428,2.05e-07,3;CL:0002619,2.47e-07,3;CL:0002231,3.16e-07,3|ontology_enrichment_development_v019=UBERON:0006215;2.55e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.02e-08!80;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0002405!1.48e-07!115;UBERON:0001474!2.18e-07!86;UBERON:0002020!5.32e-07!34;UBERON:0003528!5.32e-07!34;UBERON:0000062!5.97e-07!511;UBERON:0001893!7.94e-07!34;UBERON:0005743!9.50e-07!86|ontology_enrichment_uberon_v019=UBERON:0001136;8.93e-20;1!UBERON:0001343;8.93e-20;1!UBERON:0004910;8.93e-20;1!UBERON:0004813;8.93e-20;1!UBERON:0004909;1.43e-10;2!UBERON:0003127;2.37e-10;2!UBERON:0000412;2.55e-07;3!UBERON:0001992;2.55e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.95e-20,1;UBERON:0001343,8.95e-20,1;UBERON:0004910,8.95e-20,1;UBERON:0005154,8.95e-20,1;UBERON:0005295,8.95e-20,1;UBERON:0004813,8.95e-20,1;UBERON:0005297,8.95e-20,1;UBERON:0005294,8.95e-20,1;UBERON:0010141,8.95e-20,1;UBERON:0005891,8.95e-20,1;UBERON:0004909,1.43e-10,2;UBERON:0003127,1.89e-10,2;UBERON:0000412,2.05e-07,3;UBERON:0001992,2.05e-07,3|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0.764134057479513,0.656804715599566,0.472264687882075,0,0,0,0,0.30120591877825,0.739508020333575,0.154934401160603,0.853015394924529,0.293600439334847,0,0,0.217010870715852,1.11957737119962,0.647787332037959,0.515151135268373,0.436194716338694,0.755751887377619,0.242584061187816,0.697287110717054,0.822335776043652,0.309706370895104,0.575384784644301,0.512321413058201,0.945928919554341,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0,0.329851300186716,0.797854630486527,0.852449501065388,0,0,0,0.75374599577023,0.521482918420201,0.434377689410233,0,0.736555271975129,0.316462387440884,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.657751618414705,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0.870648686496336,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.732186172644509,0.367663080345869,0,0.535798369704479,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.352303495931295,0.485618833104395,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0.673344455816265,0,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.737930631258681,0,0,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0,0.380508304469197,0,0,0.492434012174795,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0.44024217006613,0,0,0.25248486685276,0.317489471460845,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0,0.431255149719035,0,1.01637849688985,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0.604297247958111,0.40101294060657,1.01289087829486,0,0.182091168006717,0.393373244878272,0.451199612907412,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0.2614354510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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:10413435..10413438,- | |||
|id=chr20:10413435..10413438,- | |||
|ontology_enrichment_celltype=CL:0000839!1.45e-09!70;CL:0002194!1.58e-09!63;CL:0000576!1.58e-09!63;CL:0000040!1.58e-09!63;CL:0000559!1.58e-09!63;CL:0002009!2.25e-09!65;CL:0000557!1.21e-08!71;CL:0000860!1.89e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000511;8.93e-20;1!CL:0002625;8.93e-20;1!CL:0000216;8.93e-20;1!CL:0000047;2.37e-10;2!CL:0002619;2.55e-07;3!CL:0000346;2.55e-07;3!CL:1000428;2.55e-07;3!CL:0002231;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.95e-20,1;CL:0002625,8.95e-20,1;CL:0000216,8.95e-20,1;CL:0000346,2.05e-07,3;CL:1000428,2.05e-07,3;CL:0002619,2.47e-07,3;CL:0002231,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-08!80;UBERON:0001049!1.16e-07!57;UBERON:0005068!1.16e-07!57;UBERON:0006241!1.16e-07!57;UBERON:0007135!1.16e-07!57;UBERON:0002405!1.48e-07!115;UBERON:0001474!2.18e-07!86;UBERON:0002020!5.32e-07!34;UBERON:0003528!5.32e-07!34;UBERON:0000062!5.97e-07!511;UBERON:0001893!7.94e-07!34;UBERON:0005743!9.50e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;8.93e-20;1!UBERON:0001343;8.93e-20;1!UBERON:0004910;8.93e-20;1!UBERON:0004813;8.93e-20;1!UBERON:0004909;1.43e-10;2!UBERON:0003127;2.37e-10;2!UBERON:0000412;2.55e-07;3!UBERON:0001992;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.95e-20,1;UBERON:0001343,8.95e-20,1;UBERON:0004910,8.95e-20,1;UBERON:0005154,8.95e-20,1;UBERON:0005295,8.95e-20,1;UBERON:0004813,8.95e-20,1;UBERON:0005297,8.95e-20,1;UBERON:0005294,8.95e-20,1;UBERON:0010141,8.95e-20,1;UBERON:0005891,8.95e-20,1;UBERON:0004909,1.43e-10,2;UBERON:0003127,1.89e-10,2;UBERON:0000412,2.05e-07,3;UBERON:0001992,2.05e-07,3 | |||
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| |||
|short_description=p@chr20:10413435..10413438,- | |||
}} |
Revision as of 07:28, 12 September 2013
Short description: | p@chr20:10413435..10413438, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:10413435..10413438, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.95e-20 | 1 |
seminiferous tubule epithelial cell | 8.95e-20 | 1 |
Sertoli cell | 8.95e-20 | 1 |
hair follicle dermal papilla cell | 2.05e-07 | 3 |
stem cell of epidermis | 2.05e-07 | 3 |
adult endothelial progenitor cell | 2.47e-07 | 3 |
epithelial cell of prostate | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.95e-20 | 1 |
seminiferous tubule of testis | 8.95e-20 | 1 |
epithelium of male gonad | 8.95e-20 | 1 |
epithelial cord | 8.95e-20 | 1 |
sex cord | 8.95e-20 | 1 |
seminiferous tubule epithelium | 8.95e-20 | 1 |
testis sex cord | 8.95e-20 | 1 |
genital ridge | 8.95e-20 | 1 |
primitive sex cord of indifferent gonad | 8.95e-20 | 1 |
coelomic epithelium | 8.95e-20 | 1 |
epithelium of gonad | 1.43e-10 | 2 |
open tracheal system trachea | 1.89e-10 | 2 |
dermal papilla | 2.05e-07 | 3 |
papillary layer of dermis | 2.05e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.