FFCP PHASE1:Hg19::chr21:9830979..9830990,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1074|description=CAGE_peak_at_chr21:9830979..9830990,+|id=chr21:9830979..9830990,+|ontology_enrichment_celltype=CL:0000039!1.64e-09!7;CL:0000586!1.64e-09!7;CL:0000066!2.75e-08!254|ontology_enrichment_celltype_v019=CL:0000182;4.93e-13;12!CL:0000039;2.19e-10;7!CL:0000586;2.19e-10;7|ontology_enrichment_celltype_v019_2=CL:0000182,4.73e-13,12;CL:0000039,2.24e-10,7;CL:0000586,2.24e-10,7|ontology_enrichment_development_v019=UBERON:0004161;3.69e-14;11!UBERON:0009497;4.43e-12;13!UBERON:0009117;1.54e-07;10!UBERON:0005564;1.54e-07;10|ontology_enrichment_disease=DOID:0050687!6.54e-15!143;DOID:305!4.43e-14!106;DOID:14566!5.79e-14!239;DOID:162!1.96e-12!235|ontology_enrichment_disease_v019=DOID:1909;8.69e-10;2!DOID:4468;1.71e-09;2|ontology_enrichment_disease_v019_2=DOID:1909,8.69e-10,2;DOID:4468,1.71e-09,2;DOID:0050687,1.24e-08,143;DOID:162,1.36e-07,235;DOID:14566,2.06e-07,239;DOID:305,3.39e-07,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;3.34e-09;8!UBERON:0002107;1.88e-08;19!UBERON:0006925;1.88e-08;19!UBERON:0003135;6.26e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.41e-09,8;UBERON:0002107,1.84e-08,19;UBERON:0006925,1.84e-08,19;UBERON:0008836,1.84e-08,19;UBERON:0008835,2.21e-07,22;UBERON:0003894,2.21e-07,22;UBERON:0009854,4.40e-07,23;UBERON:0003135,6.35e-07,11|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.91419068741876,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,4.19116680008915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0.434589487688032,0,0,0,0,0,0,0,0.588187602953219,0.671286347903371,11.3852239634511,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0.160317640503067,0,0.39961921916426,0,0.114536596165916,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81201319306614,2.47247575143499,2.35912403489647,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13837600380941,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,2.21875575573872,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,1.01084389488329,2.75778293221613,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr21:9830979..9830990,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1074 | |||
|description=CAGE_peak_at_chr21:9830979..9830990,+ | |||
|id=chr21:9830979..9830990,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.64e-09!7;CL:0000586!1.64e-09!7;CL:0000066!2.75e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.93e-13;12!CL:0000039;2.19e-10;7!CL:0000586;2.19e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.73e-13,12;CL:0000039,2.24e-10,7;CL:0000586,2.24e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.69e-14;11!UBERON:0009497;4.43e-12;13!UBERON:0009117;1.54e-07;10!UBERON:0005564;1.54e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!6.54e-15!143;DOID:305!4.43e-14!106;DOID:14566!5.79e-14!239;DOID:162!1.96e-12!235 | |||
|ontology_enrichment_disease_v019=DOID:1909;8.69e-10;2!DOID:4468;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.69e-10,2;DOID:4468,1.71e-09,2;DOID:0050687,1.24e-08,143;DOID:162,1.36e-07,235;DOID:14566,2.06e-07,239;DOID:305,3.39e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.34e-09;8!UBERON:0002107;1.88e-08;19!UBERON:0006925;1.88e-08;19!UBERON:0003135;6.26e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.41e-09,8;UBERON:0002107,1.84e-08,19;UBERON:0006925,1.84e-08,19;UBERON:0008836,1.84e-08,19;UBERON:0008835,2.21e-07,22;UBERON:0003894,2.21e-07,22;UBERON:0009854,4.40e-07,23;UBERON:0003135,6.35e-07,11 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.91419068741876,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,4.19116680008915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0.434589487688032,0,0,0,0,0,0,0,0.588187602953219,0.671286347903371,11.3852239634511,0,1.26598838716816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0.160317640503067,0,0.39961921916426,0,0.114536596165916,0.857974989309823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81201319306614,2.47247575143499,2.35912403489647,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13837600380941,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,2.21875575573872,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0.594600453887843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,1.01084389488329,2.75778293221613,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:9830979..9830990,+ | |||
}} |
Revision as of 10:53, 12 September 2013
Short description: | p@chr21:9830979..9830990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:9830979..9830990, + |
Coexpression cluster: | C1074_chronic_testicular_melanoma_hepatocellular_pagetoid_acute_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.73e-13 | 12 |
germ line cell | 2.24e-10 | 7 |
germ cell | 2.24e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.41e-09 | 8 |
liver | 1.84e-08 | 19 |
digestive gland | 1.84e-08 | 19 |
liver bud | 1.84e-08 | 19 |
hepatic diverticulum | 2.21e-07 | 22 |
liver primordium | 2.21e-07 | 22 |
digestive tract diverticulum | 4.40e-07 | 23 |
male reproductive organ | 6.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.69e-10 | 2 |
clear cell adenocarcinoma | 1.71e-09 | 2 |
cell type cancer | 1.24e-08 | 143 |
cancer | 1.36e-07 | 235 |
disease of cellular proliferation | 2.06e-07 | 239 |
carcinoma | 3.39e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.