FFCP PHASE1:Hg19::chr22:26875565..26875576,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89781|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15844|TSSclassifier=S|UniProt=Q9NQG7|association_with_transcript=-14bp_to_NM_152841,uc003aci.2,uc003acj.2,uc003aco.1_5end|coexpression_cluster_id=C33|description=CAGE_peak_15_at_HPS4_5end|id=chr22:26875565..26875576,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2!CL:0000817;3.25e-19;1!CL:0000047;2.72e-10;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2;CL:0000817,3.16e-07,3|ontology_enrichment_development_v019=UBERON:0006215;8.94e-25;3|ontology_enrichment_disease=DOID:8692!2.27e-15!31;DOID:1240!1.37e-14!39;DOID:2531!9.71e-14!51;DOID:0060083!9.71e-14!51;DOID:1036!1.39e-12!8|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001950!5.34e-07!20|ontology_enrichment_uberon_v019=UBERON:0002037;6.50e-13;6!UBERON:0002680;6.35e-09;9!UBERON:0001895;6.35e-09;9!UBERON:0004733;6.54e-07;12!UBERON:0002028;6.54e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.11e-13,6;UBERON:0006215,5.11e-13,6;UBERON:0002680,5.42e-09,9;UBERON:0001895,5.42e-09,9;UBERON:0010092,5.42e-09,9;UBERON:0004733,5.81e-07,12;UBERON:0002028,5.81e-07,12;UBERON:0007277,5.81e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,1.58487181223807,0,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11261543589958,14.6403852573944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,1.15415370381156,0.355709216742071,0,0.199579371432817,0,0.423347165447766,0,0.561594356226918,0.456469358066384,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,1.52581736317083,1.87984741883082,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.498635045700469,0.451191321234361,0.588187602953219,0.671286347903371,0.37950746544837,0.953619473882272,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,0.0633107959558787,0,0,0,0,0,0.458146384663663,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38068310173083,0,0,0,5.30027555648885,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0,0.110929051536852,0,0,0,0,0.570930667089935,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.431299245586727,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0.867479195013787,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0.437119121007915,0,0,0,0,0,0,0,0,0.580120991762195,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p15@HPS4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=89781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |||
|TSSclassifier=S | |||
|UniProt=Q9NQG7 | |||
|association_with_transcript=-14bp_to_NM_152841,uc003aci.2,uc003acj.2,uc003aco.1_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_15_at_HPS4_5end | |||
|id=chr22:26875565..26875576,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2!CL:0000817;3.25e-19;1!CL:0000047;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2;CL:0000817,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.94e-25;3 | |||
|ontology_enrichment_disease=DOID:8692!2.27e-15!31;DOID:1240!1.37e-14!39;DOID:2531!9.71e-14!51;DOID:0060083!9.71e-14!51;DOID:1036!1.39e-12!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!5.34e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.50e-13;6!UBERON:0002680;6.35e-09;9!UBERON:0001895;6.35e-09;9!UBERON:0004733;6.54e-07;12!UBERON:0002028;6.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.11e-13,6;UBERON:0006215,5.11e-13,6;UBERON:0002680,5.42e-09,9;UBERON:0001895,5.42e-09,9;UBERON:0010092,5.42e-09,9;UBERON:0004733,5.81e-07,12;UBERON:0002028,5.81e-07,12;UBERON:0007277,5.81e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,1.58487181223807,0,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11261543589958,14.6403852573944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,1.15415370381156,0.355709216742071,0,0.199579371432817,0,0.423347165447766,0,0.561594356226918,0.456469358066384,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.241192877250816,1.52581736317083,1.87984741883082,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.498635045700469,0.451191321234361,0.588187602953219,0.671286347903371,0.37950746544837,0.953619473882272,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,0.0633107959558787,0,0,0,0,0,0.458146384663663,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38068310173083,0,0,0,5.30027555648885,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0.886068179966986,0,0,0,0.110929051536852,0,0,0,0,0.570930667089935,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0.127894371303652,0.431299245586727,0.157265941855896,0,0.169732529954025,0.212574920101683,0,0,0,0.867479195013787,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0.437119121007915,0,0,0,0,0,0,0,0,0.580120991762195,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p15@HPS4 | |||
}} |
Revision as of 11:17, 12 September 2013
Short description: | p15@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_HPS4_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -14bp_to_NM_152841, uc003aci.2, uc003acj.2, uc003aco.1_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | Q9NQG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.30e-37 | 2 |
erythroblast | 1.30e-37 | 2 |
megakaryocyte-erythroid progenitor cell | 1.30e-37 | 2 |
erythroid progenitor cell | 1.30e-37 | 2 |
reticulocyte | 1.30e-37 | 2 |
proerythroblast | 1.30e-37 | 2 |
basophilic erythroblast | 1.30e-37 | 2 |
polychromatophilic erythroblast | 1.30e-37 | 2 |
orthochromatic erythroblast | 1.30e-37 | 2 |
precursor B cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.11e-13 | 6 |
rhombic lip | 5.11e-13 | 6 |
regional part of metencephalon | 5.42e-09 | 9 |
metencephalon | 5.42e-09 | 9 |
future metencephalon | 5.42e-09 | 9 |
segmental subdivision of hindbrain | 5.81e-07 | 12 |
hindbrain | 5.81e-07 | 12 |
presumptive hindbrain | 5.81e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.