FFCP PHASE1:Hg19::chr22:50919944..50919990,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79924|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28898|TSSclassifier=S|UniProt=Q7Z4H4|association_with_transcript=0bp_to_ENST00000395738,NM_024866_5end|coexpression_cluster_id=C3486|description=CAGE_peak_1_at_ADM2_5end|id=chr22:50919944..50919990,+|ontology_enrichment_celltype=CL:0000548!1.56e-12!679;CL:0000004!1.56e-12!679;CL:0000255!1.56e-12!679;CL:0000012!4.71e-12!682;CL:0000066!2.97e-10!254;CL:0000063!1.34e-08!578;CL:0000057!2.02e-07!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,4.72e-09,253;CL:0000057,1.14e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!7.23e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:0050687,6.77e-09,143|ontology_enrichment_uberon=UBERON:0000466!2.35e-10!126;UBERON:0004119!2.88e-10!169;UBERON:0000925!2.88e-10!169;UBERON:0006595!2.88e-10!169;UBERON:0000464!1.33e-08!104;UBERON:0009569!1.09e-07!113;UBERON:0001007!1.26e-07!155;UBERON:0001555!1.26e-07!155;UBERON:0007026!1.26e-07!155;UBERON:0002553!1.74e-07!70;UBERON:0002100!4.67e-07!216;UBERON:0003102!7.65e-07!95;UBERON:0005911!8.38e-07!82|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0009569,4.33e-08,112;UBERON:0004119,9.80e-08,160;UBERON:0000925,9.80e-08,160;UBERON:0006595,9.80e-08,160;UBERON:0002100,1.67e-07,199;UBERON:0005177,8.20e-07,101|phase1_expression=7.44881355009282,8.13581990785736,9.58489947852604,10.007329835313,8.04529969969118,6.10636966870258,7.59899634504932,5.05375898741465,1.04474251279935,5.16041266653169,23.0274385430901,2.83973783769224,5.53910654279752,0.247532705920093,0.662794751455832,0,1.80808358407193,1.46062018077475,0.487932798790507,0.246242116153576,0.204000691244253,9.71709636582072,0.286235987131057,0.273748850145768,0.753255837568817,0.458480434487708,0.246301768349837,0.629686250509434,0.393364276848904,0,0,3.67768489791571,3.91567694411725,26.2525347218419,0,0,0.293600439334847,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0.257575567634187,0.436194716338694,0.377875943688809,0,1.62700325833979,1.6446715520873,3.09706370895104,2.58923153089935,4.09857130446561,1.41889337933151,0.344745680736619,1.29096936716765,0,0.564727018627814,2.45615535052061,0.224723484445085,0.306083892370903,1.92557416245656,2.55734850319616,1.31940520074686,0.598390972864896,1.70489900213078,3.77272010217159,7.94339314567596,6.85104473895132,2.51248665256743,4.69334626578181,1.3031330682307,6.05399502633369,5.52416453981347,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,1.14950487990897,0,0,0.569212969109448,0.587237189370939,0,0,2.24203425192614,0,1.180258620683,1.57204305099666,1.23360899399706,1.17030546773475,0.977766799900771,0,1.94826728407911,1.44833593950726,0.589211814949674,0.221533894583621,0.270803863765016,0.25618263945135,0.650296737799391,0.164437904603676,1.93445012450094,0,1.03800594213442,1.07016331235885,3.1360657141493,1.0197840842781,0,0.68725489096526,0.253019692019503,0.637130828648193,1.30216690771284,0,1.80690142893327,1.02389288923535,1.24930726552346,1.18388626022008,0.821127996921047,0.403213486449465,0,0.434473211648397,2.43806866313962,0,6.13740296848946,3.97583067623023,6.01605492763067,7.9665585428453,3.9764297352555,9.73269740605272,0.0945348171640679,1.33037638477538,0.527008714158756,0.851363990735132,12.0217445136539,6.67411997011973,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,2.78267370313387,0.860234595106124,0.347140501607594,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0,3.22263453687318,2.28081631715554,1.95249646038536,0,0.81014194788176,0,0.673588117878509,0.337834441449967,0,1.89853131913626,0.366403487860815,0,0,7.84969293856562,12.9212707440783,5.06522046658319,3.83986624358335,22.3732564184075,7.80270440836386,3.92474320099615,14.9448594021587,7.89336154934912,0.311211035399766,6.60082293141472,0.653847612453835,4.23800797405808,0.576175924479999,35.1482147750695,0,0.570471821544449,1.04614076386261,5.16711794032565,2.42809416552197,0.98315564691574,1.22492502752936,0.982674538494144,7.54278202583088,11.8800285728205,16.3196173323848,4.55080680969013,43.8357066507905,1.0100166837244,2.12701483782339,0.554128230968366,5.70670907145089,4.90380473278431,13.8219014194069,2.60894021268048,5.74046834204358,7.901623386287,7.41761654058466,5.70173082560364,3.7098910525838,15.4584324027377,8.74749224758472,6.75105328965065,7.60008640257349,8.33031455005578,6.71964260088785,6.30419621593366,9.9402685904652,3.92933183087797,2.20428770003634,0.386521706326594,1.36373060295417,1.14721838155602,4.75697453905422,2.91565490307268,2.5562667431294,2.69518743039963,3.78481276313443,2.55484151353081,0,2.57296375277154,1.38134921352481,0,0,0.354920400119532,1.68584690078102,0,1.43382164552112,1.08939722046203,0.237270619111097,0.134831308160164,0,0,0,2.80483547606892,1.2347220339942,2.94017422771084,7.60530208930985,18.6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79924 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28898 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z4H4 | |||
|association_with_transcript=0bp_to_ENST00000395738,NM_024866_5end | |||
|coexpression_cluster_id=C3486 | |||
|description=CAGE_peak_1_at_ADM2_5end | |||
|id=chr22:50919944..50919990,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.56e-12!679;CL:0000004!1.56e-12!679;CL:0000255!1.56e-12!679;CL:0000012!4.71e-12!682;CL:0000066!2.97e-10!254;CL:0000063!1.34e-08!578;CL:0000057!2.02e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.72e-09,253;CL:0000057,1.14e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.23e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.77e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000466!2.35e-10!126;UBERON:0004119!2.88e-10!169;UBERON:0000925!2.88e-10!169;UBERON:0006595!2.88e-10!169;UBERON:0000464!1.33e-08!104;UBERON:0009569!1.09e-07!113;UBERON:0001007!1.26e-07!155;UBERON:0001555!1.26e-07!155;UBERON:0007026!1.26e-07!155;UBERON:0002553!1.74e-07!70;UBERON:0002100!4.67e-07!216;UBERON:0003102!7.65e-07!95;UBERON:0005911!8.38e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,4.33e-08,112;UBERON:0004119,9.80e-08,160;UBERON:0000925,9.80e-08,160;UBERON:0006595,9.80e-08,160;UBERON:0002100,1.67e-07,199;UBERON:0005177,8.20e-07,101 | |||
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| |||
|short_description=p1@ADM2 | |||
}} |
Revision as of 12:34, 12 September 2013
Short description: | p1@ADM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ADM2_5end |
Coexpression cluster: | C3486_Fibroblast_Trabecular_Bronchial_Keratinocyte_Tracheal_somatostatinoma_spindle |
Association with transcript: | 0bp_to_ENST00000395738, NM_024866_5end |
EntrezGene: | ADM2 |
HGNC: | 28898 |
UniProt: | Q7Z4H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.72e-09 | 253 |
fibroblast | 1.14e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 4.33e-08 | 112 |
endoderm-derived structure | 9.80e-08 | 160 |
endoderm | 9.80e-08 | 160 |
presumptive endoderm | 9.80e-08 | 160 |
trunk | 1.67e-07 | 199 |
trunk region element | 8.20e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.77e-09 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.