FFCP PHASE1:Hg19::chr2:109150810..109150819,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3987|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6616|TSSclassifier=S|UniProt=B7Z483|association_with_transcript=0bp_to_NM_001193483_5end|description=CAGE_peak_12_at_LIMS1_5end|id=chr2:109150810..109150819,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003714;8.69e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.56e-08,2|phase1_expression=0.54503513781167,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0.436882744260345,1.05506791291381,0.37129905888014,0,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0.229240217243854,0.410502947249729,0.157421562627358,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0.232401601740905,0.284338464974843,0.587200878669695,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0,0.512321413058201,0.236482229888585,0,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0.336985893439485,0.150176892841506,0,0.570025487482497,0.59675003159727,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,0,0.590129310341499,1.17903228824749,0.616804496998528,0.334372990781356,0.651844533267181,0.473447805734733,0,0.334231370655521,0,0.443067789167242,0.812411591295047,0.25618263945135,0.260118695119756,0.328875809207352,0,0,0.296573126324121,0,0,0.679856056185397,0,0,0.506039384039006,0.318565414324097,0,0,0,0.127986611154418,0,0.710331756132051,0,0.403213486449465,1.06976078313403,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0.850813354476611,0.443458794925128,0.351339142772504,0.458426764241994,0,0.370784442784429,0.324547393654683,0.348259474598534,0,0.238490624305342,0.571994910780128,0,0.198762407366705,0.860234595106124,0,0,0.838998872419812,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0.367663080345869,0,0.446498641420399,0.44905874525234,0.337834441449967,0,0,0,1.31780417436063,0,0,0.993943903390637,0.506522046658319,0.397227542439656,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0.933633106199299,0.404132016209064,0,0.605429710579726,0.576175924479999,0,0.936480230490962,0,0.448346041655403,0.352303495931295,0,0.140450806702248,0.816616685019573,0.737005903870608,0.309977343527296,0,0,0,0,0,0.125118519871964,1.10825646193673,0,0,0.600952235626387,0.340296549480063,0.358779271377724,1.2813443329114,0.211931901159562,1.20036438433761,0.721367704669072,0.515281080091258,0.37223371266318,0.168776332241266,1.16924406193438,0.252433774244115,0.460249493211497,0.484938170456436,0.355009592516614,0.806016785821122,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0.609868530647977,0.662648841607426,0.348581828608555,0.207322110030741,0.252320850875628,0.72995471815166,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.354920400119532,0.168584690078102,0.723033089650446,0.220587945464788,0.653638332277218,0,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0.982827216677626,0,0.882926198829301,0,0.343135620597051,1.20725313949488,0,0.502644862058154,0.555530670951178,0,0,0,0.463721619900307,0.234817388471643,0.577465791044295,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0.93733833986777,0.671928512795438,0.425325291727159,0.268675568108545,0.871901815541886,1.15014803749563,0,0.176096868026452,0.207328115540772,0.288239906833923,0.6312121671319,0.380987365753014,0,0,0,0.411309970813294,0,0,0.448524337381443,0.87192013766656,1.24675085895615,0.517086863031111,3.57656445851882,0.845302752556,0.797814349754612,0,0.771622122786426,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0.904318131178758,0,0.899756920638513,0,0,0,0.718874566474748,0,0,0,0,0.537182889719687,0.112085143993527,0.394061520403854,0.646882724578552,0,0.76228387266739,2.60279707715243,0,0.335032530668698,1.27587750330633,0.749007023947182,0,0.414415513436035,0.49076596687656,0,0.271265023699736,0.415941723061614,0.356857977594324,0.315404830067869,0.585707074963566,0.601892199455438,0,0,1.32845119707087,0.921845842708516,0.434418072340414,0,0,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0.604780586659361,0.496215615637554,0.460385919864187,0,1.40953064181271,0,0.321707842287215,0,0.154209693802656,0,0.9033987161519,0.519254429183621,0.464841513839837,0.120859449591622,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6616 | |||
|TSSclassifier=S | |||
|UniProt=B7Z483 | |||
|association_with_transcript=0bp_to_NM_001193483_5end | |||
|description=CAGE_peak_12_at_LIMS1_5end | |||
|id=chr2:109150810..109150819,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;8.69e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.56e-08,2 | |||
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| |||
|short_description=p12@LIMS1 | |||
}} |
Revision as of 12:53, 12 September 2013
Short description: | p12@LIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_LIMS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001193483_5end |
EntrezGene: | LIMS1 |
HGNC: | 6616 |
UniProt: | B7Z483 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.56e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.