FFCP PHASE1:Mm9::chr10:111706834..111706844,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=189|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:111706834..111706844,+|id=chr10:111706834..111706844,+|ontology_enrichment_celltype=CL:0002610!2.98e-19!3|ontology_enrichment_celltype_v019_2=CL:0002610,3.27e-44,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004684!2.98e-19!3;UBERON:0002275!2.98e-19!3;UBERON:0002616!1.59e-13!49;UBERON:0000955!3.16e-13!50;UBERON:0006238!3.16e-13!50;UBERON:0001017!2.25e-10!73;UBERON:0005743!2.25e-10!73;UBERON:0000033!3.26e-10!63;UBERON:0000073!4.68e-10!75;UBERON:0001016!4.68e-10!75;UBERON:0002298!3.06e-09!6;UBERON:0001049!3.29e-08!52;UBERON:0005068!3.29e-08!52;UBERON:0006241!3.29e-08!52;UBERON:0007135!3.29e-08!52;UBERON:0002259!2.43e-07!1;UBERON:0002314!2.43e-07!1;UBERON:0006777!2.43e-07!1;UBERON:0005882!2.43e-07!1;UBERON:0007811!4.28e-07!86;UBERON:0001851!5.53e-07!1;UBERON:0005889!5.53e-07!1;UBERON:0000470!5.53e-07!1;UBERON:0004121!5.68e-07!102;UBERON:0000924!5.68e-07!102;UBERON:0006601!5.68e-07!102;UBERON:0002950!8.32e-07!4;UBERON:0001891!8.32e-07!4;UBERON:0009616!8.32e-07!4;UBERON:0003080!9.58e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.27e-44,3;UBERON:0002275,3.27e-44,3;UBERON:0002259,1.86e-15,1;UBERON:0002314,1.86e-15,1;UBERON:0004061,1.86e-15,1;UBERON:0006777,1.86e-15,1;UBERON:0005882,1.86e-15,1;UBERON:0000073,4.19e-10,54;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0001894,7.98e-07,10;UBERON:0006222,7.98e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,3.83062014255563,4.14737639791857,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.457500602818626,0,0,0.255715457330331,4.57133698031032,1.94689515681309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:111706834..111706844,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:111706834..111706844,+ | |||
|id=chr10:111706834..111706844,+ | |||
|ontology_enrichment_celltype=CL:0002610!2.98e-19!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.27e-44,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!2.98e-19!3;UBERON:0002275!2.98e-19!3;UBERON:0002616!1.59e-13!49;UBERON:0000955!3.16e-13!50;UBERON:0006238!3.16e-13!50;UBERON:0001017!2.25e-10!73;UBERON:0005743!2.25e-10!73;UBERON:0000033!3.26e-10!63;UBERON:0000073!4.68e-10!75;UBERON:0001016!4.68e-10!75;UBERON:0002298!3.06e-09!6;UBERON:0001049!3.29e-08!52;UBERON:0005068!3.29e-08!52;UBERON:0006241!3.29e-08!52;UBERON:0007135!3.29e-08!52;UBERON:0002259!2.43e-07!1;UBERON:0002314!2.43e-07!1;UBERON:0006777!2.43e-07!1;UBERON:0005882!2.43e-07!1;UBERON:0007811!4.28e-07!86;UBERON:0001851!5.53e-07!1;UBERON:0005889!5.53e-07!1;UBERON:0000470!5.53e-07!1;UBERON:0004121!5.68e-07!102;UBERON:0000924!5.68e-07!102;UBERON:0006601!5.68e-07!102;UBERON:0002950!8.32e-07!4;UBERON:0001891!8.32e-07!4;UBERON:0009616!8.32e-07!4;UBERON:0003080!9.58e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.27e-44,3;UBERON:0002275,3.27e-44,3;UBERON:0002259,1.86e-15,1;UBERON:0002314,1.86e-15,1;UBERON:0004061,1.86e-15,1;UBERON:0006777,1.86e-15,1;UBERON:0005882,1.86e-15,1;UBERON:0000073,4.19e-10,54;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0001894,7.98e-07,10;UBERON:0006222,7.98e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,3.83062014255563,4.14737639791857,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.457500602818626,0,0,0.255715457330331,4.57133698031032,1.94689515681309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:111706834..111706844,+ | |||
}} |
Revision as of 15:44, 12 September 2013
Short description: | p@chr10:111706834..111706844, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:111706834..111706844, + |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.27e-44 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.27e-44 | 3 |
reticular formation | 3.27e-44 | 3 |
corpora quadrigemina | 1.86e-15 | 1 |
midbrain tectum | 1.86e-15 | 1 |
neural tube mantle layer | 1.86e-15 | 1 |
tectal plate | 1.86e-15 | 1 |
neural tube alar plate | 1.86e-15 | 1 |
regional part of nervous system | 4.19e-10 | 54 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
diencephalon | 7.98e-07 | 10 |
future diencephalon | 7.98e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.