FFCP PHASE1:Mm9::chr10:116652899..116652908,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:116652899..116652908,-|id=chr10:116652899..116652908,-|ontology_enrichment_celltype=CL:0002031!7.34e-07!25|ontology_enrichment_celltype_v019_2=CL:0000355,4.60e-15,9|ontology_enrichment_disease=DOID:0060100!3.45e-13!3;DOID:4045!3.45e-13!3;DOID:0050686!8.38e-07!6|ontology_enrichment_disease_v019_2=DOID:0060100,2.45e-43,3;DOID:4045,2.45e-43,3;DOID:0050686,3.68e-22,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.60e-15,9;UBERON:0002036,4.60e-15,9;UBERON:0002385,4.60e-15,9;UBERON:0000486,4.60e-15,9;UBERON:0007503,4.60e-15,9;UBERON:0001015,4.60e-15,9;UBERON:0002329,4.60e-15,9;UBERON:0003082,4.60e-15,9;UBERON:0003059,4.60e-15,9;UBERON:0007282,4.60e-15,9;UBERON:0004290,4.60e-15,9;UBERON:0009618,4.60e-15,9;UBERON:0000383,1.22e-13,10;UBERON:0007524,1.80e-12,11;UBERON:0003077,1.80e-12,11;UBERON:0007285,1.80e-12,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0.0874204024189974,0,0,0,0.946386496074713,0.822686601634433,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,5.4693474116666,2.61761871986899,5.88231488031014,12.9778642142105,5.82612423637384,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:116652899..116652908,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:116652899..116652908,- | |||
|id=chr10:116652899..116652908,- | |||
|ontology_enrichment_celltype=CL:0002031!7.34e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.60e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.45e-13!3;DOID:4045!3.45e-13!3;DOID:0050686!8.38e-07!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.45e-43,3;DOID:4045,2.45e-43,3;DOID:0050686,3.68e-22,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.60e-15,9;UBERON:0002036,4.60e-15,9;UBERON:0002385,4.60e-15,9;UBERON:0000486,4.60e-15,9;UBERON:0007503,4.60e-15,9;UBERON:0001015,4.60e-15,9;UBERON:0002329,4.60e-15,9;UBERON:0003082,4.60e-15,9;UBERON:0003059,4.60e-15,9;UBERON:0007282,4.60e-15,9;UBERON:0004290,4.60e-15,9;UBERON:0009618,4.60e-15,9;UBERON:0000383,1.22e-13,10;UBERON:0007524,1.80e-12,11;UBERON:0003077,1.80e-12,11;UBERON:0007285,1.80e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0.0874204024189974,0,0,0,0.946386496074713,0.822686601634433,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,5.4693474116666,2.61761871986899,5.88231488031014,12.9778642142105,5.82612423637384,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:116652899..116652908,- | |||
}} |
Revision as of 15:49, 12 September 2013
Short description: | p@chr10:116652899..116652908, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:116652899..116652908, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.60e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.60e-15 | 9 |
striated muscle tissue | 4.60e-15 | 9 |
muscle tissue | 4.60e-15 | 9 |
multilaminar epithelium | 4.60e-15 | 9 |
epithelial vesicle | 4.60e-15 | 9 |
musculature | 4.60e-15 | 9 |
somite | 4.60e-15 | 9 |
myotome | 4.60e-15 | 9 |
presomitic mesoderm | 4.60e-15 | 9 |
presumptive segmental plate | 4.60e-15 | 9 |
dermomyotome | 4.60e-15 | 9 |
trunk paraxial mesoderm | 4.60e-15 | 9 |
musculature of body | 1.22e-13 | 10 |
dense mesenchyme tissue | 1.80e-12 | 11 |
paraxial mesoderm | 1.80e-12 | 11 |
presumptive paraxial mesoderm | 1.80e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.45e-43 | 3 |
muscle cancer | 2.45e-43 | 3 |
organ system cancer | 3.68e-22 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.