FFCP PHASE1:Hg19::chr2:207072482..207072485,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:207072482..207072485,+|id=chr2:207072482..207072485,+|ontology_enrichment_celltype=CL:0000039!8.42e-35!7;CL:0000586!8.42e-35!7;CL:0000047!2.86e-10!8;CL:0000540!5.44e-08!6;CL:0000031!5.44e-08!6;CL:0000404!5.44e-08!6|ontology_enrichment_celltype_v019=CL:0000039;7.87e-29;7!CL:0000586;7.87e-29;7!CL:0000047;2.90e-12;2!CL:0000083;7.07e-07;4|ontology_enrichment_celltype_v019_2=CL:0000039,7.51e-29,7;CL:0000586,7.51e-29,7;CL:0000083,6.50e-07,4|ontology_enrichment_development_v019=UBERON:0009117;1.98e-20;10!UBERON:0005564;1.98e-20;10|ontology_enrichment_disease=DOID:3095!6.94e-21!22;DOID:2994!6.94e-21!22;DOID:1799!9.91e-07!1;DOID:10165!9.91e-07!1;DOID:1798!9.91e-07!1|ontology_enrichment_disease_v019=DOID:1799;1.49e-23;1!DOID:10165;1.49e-23;1!DOID:1798;1.49e-23;1!DOID:3095;2.29e-16;22!DOID:2994;2.29e-16;22!DOID:1793;7.07e-07;4|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-23,1;DOID:10165,1.07e-23,1;DOID:1798,1.07e-23,1;DOID:3095,2.44e-16,22;DOID:2994,2.44e-16,22;DOID:305,1.77e-07,106;DOID:1793,6.50e-07,4|ontology_enrichment_uberon=UBERON:0000473!1.25e-10!8;UBERON:0003135!9.69e-08!11|ontology_enrichment_uberon_v019=UBERON:0000473;2.47e-25;8!UBERON:0003135;1.21e-18;11!UBERON:0000991;4.24e-10;21!UBERON:0003101;1.14e-09;22!UBERON:0000079;1.14e-09;22!UBERON:0002323;3.47e-08;45|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.37e-25,8;UBERON:0003135,1.17e-18,11;UBERON:0000991,4.17e-10,21;UBERON:0009196,4.17e-10,21;UBERON:0009117,4.17e-10,21;UBERON:0005564,4.17e-10,21;UBERON:0004176,1.12e-09,22;UBERON:0003101,1.12e-09,22;UBERON:0000079,1.12e-09,22;UBERON:0002323,4.37e-08,46;UBERON:0004458,1.31e-07,49;UBERON:0003886,6.21e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.628303510868405,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,1.14028650910293,2.03977659483963,1.3360870263278,0.36757959813938,1.25353769646188,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:207072482..207072485,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:207072482..207072485,+ | |||
|id=chr2:207072482..207072485,+ | |||
|ontology_enrichment_celltype=CL:0000039!8.42e-35!7;CL:0000586!8.42e-35!7;CL:0000047!2.86e-10!8;CL:0000540!5.44e-08!6;CL:0000031!5.44e-08!6;CL:0000404!5.44e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.87e-29;7!CL:0000586;7.87e-29;7!CL:0000047;2.90e-12;2!CL:0000083;7.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.51e-29,7;CL:0000586,7.51e-29,7;CL:0000083,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.98e-20;10!UBERON:0005564;1.98e-20;10 | |||
|ontology_enrichment_disease=DOID:3095!6.94e-21!22;DOID:2994!6.94e-21!22;DOID:1799!9.91e-07!1;DOID:10165!9.91e-07!1;DOID:1798!9.91e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.49e-23;1!DOID:10165;1.49e-23;1!DOID:1798;1.49e-23;1!DOID:3095;2.29e-16;22!DOID:2994;2.29e-16;22!DOID:1793;7.07e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-23,1;DOID:10165,1.07e-23,1;DOID:1798,1.07e-23,1;DOID:3095,2.44e-16,22;DOID:2994,2.44e-16,22;DOID:305,1.77e-07,106;DOID:1793,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.25e-10!8;UBERON:0003135!9.69e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.47e-25;8!UBERON:0003135;1.21e-18;11!UBERON:0000991;4.24e-10;21!UBERON:0003101;1.14e-09;22!UBERON:0000079;1.14e-09;22!UBERON:0002323;3.47e-08;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.37e-25,8;UBERON:0003135,1.17e-18,11;UBERON:0000991,4.17e-10,21;UBERON:0009196,4.17e-10,21;UBERON:0009117,4.17e-10,21;UBERON:0005564,4.17e-10,21;UBERON:0004176,1.12e-09,22;UBERON:0003101,1.12e-09,22;UBERON:0000079,1.12e-09,22;UBERON:0002323,4.37e-08,46;UBERON:0004458,1.31e-07,49;UBERON:0003886,6.21e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.628303510868405,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,1.14028650910293,2.03977659483963,1.3360870263278,0.36757959813938,1.25353769646188,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:207072482..207072485,+ | |||
}} |
Revision as of 16:12, 12 September 2013
Short description: | p@chr2:207072482..207072485, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:207072482..207072485, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.51e-29 | 7 |
germ cell | 7.51e-29 | 7 |
epithelial cell of pancreas | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 2.37e-25 | 8 |
male reproductive organ | 1.17e-18 | 11 |
gonad | 4.17e-10 | 21 |
indifferent external genitalia | 4.17e-10 | 21 |
indifferent gonad | 4.17e-10 | 21 |
gonad primordium | 4.17e-10 | 21 |
external genitalia | 1.12e-09 | 22 |
male organism | 1.12e-09 | 22 |
male reproductive system | 1.12e-09 | 22 |
body cavity | 4.37e-08 | 46 |
body cavity or lining | 1.31e-07 | 49 |
body cavity precursor | 6.21e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.07e-23 | 1 |
endocrine pancreas cancer | 1.07e-23 | 1 |
pancreatic endocrine carcinoma | 1.07e-23 | 1 |
germ cell and embryonal cancer | 2.44e-16 | 22 |
germ cell cancer | 2.44e-16 | 22 |
carcinoma | 1.77e-07 | 106 |
pancreatic cancer | 6.50e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.