FFCP PHASE1:Mm9::chr10:128298481..128298531,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:128298481..128298531,+|id=chr10:128298481..128298531,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,1.14e-15,6;CL:0000556,1.14e-15,6;CL:0000945,5.74e-11,1;CL:0000236,5.74e-11,1;CL:0000826,5.74e-11,1;CL:0000050,1.14e-10,9;CL:0000839,1.45e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.40e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.90e-11,1;UBERON:0001097,2.90e-11,1;UBERON:0003968,2.90e-11,1;UBERON:0001467,2.90e-11,1;UBERON:0001153,4.58e-11,1;UBERON:0001045,4.58e-11,1;UBERON:0002193,2.58e-07,48;UBERON:0002405,2.58e-07,48;UBERON:0002106,3.16e-07,6;UBERON:0004457,3.16e-07,6;UBERON:0000042,3.16e-07,6;UBERON:0004854,3.16e-07,6;UBERON:0009034,3.16e-07,6;UBERON:0002095,3.16e-07,6;UBERON:0004782,3.16e-07,6;UBERON:0003281,3.16e-07,6;UBERON:0009664,3.16e-07,6;UBERON:0002296,3.16e-07,6;UBERON:0005602,3.16e-07,6;UBERON:0001179,3.16e-07,6;UBERON:0006293,3.16e-07,6|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0.404950534779652,0,6.30924330716475,8.08975158273859,2.54633791078818,0,0.992909512008853,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.88406825470758,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,1.02522528478712,0,0,0.565105371014073,0.410082683163076,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:128298481..128298531,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:128298481..128298531,+ | |||
|id=chr10:128298481..128298531,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.14e-15,6;CL:0000556,1.14e-15,6;CL:0000945,5.74e-11,1;CL:0000236,5.74e-11,1;CL:0000826,5.74e-11,1;CL:0000050,1.14e-10,9;CL:0000839,1.45e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.40e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.90e-11,1;UBERON:0001097,2.90e-11,1;UBERON:0003968,2.90e-11,1;UBERON:0001467,2.90e-11,1;UBERON:0001153,4.58e-11,1;UBERON:0001045,4.58e-11,1;UBERON:0002193,2.58e-07,48;UBERON:0002405,2.58e-07,48;UBERON:0002106,3.16e-07,6;UBERON:0004457,3.16e-07,6;UBERON:0000042,3.16e-07,6;UBERON:0004854,3.16e-07,6;UBERON:0009034,3.16e-07,6;UBERON:0002095,3.16e-07,6;UBERON:0004782,3.16e-07,6;UBERON:0003281,3.16e-07,6;UBERON:0009664,3.16e-07,6;UBERON:0002296,3.16e-07,6;UBERON:0005602,3.16e-07,6;UBERON:0001179,3.16e-07,6;UBERON:0006293,3.16e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0.404950534779652,0,6.30924330716475,8.08975158273859,2.54633791078818,0,0.992909512008853,0.261199789138935,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.88406825470758,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,1.02522528478712,0,0,0.565105371014073,0.410082683163076,1.37266903923914,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:128298481..128298531,+ | |||
}} |
Revision as of 16:12, 12 September 2013
Short description: | p@chr10:128298481..128298531, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:128298481..128298531, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.14e-15 | 6 |
megakaryocyte | 1.14e-15 | 6 |
lymphocyte of B lineage | 5.74e-11 | 1 |
B cell | 5.74e-11 | 1 |
pro-B cell | 5.74e-11 | 1 |
megakaryocyte-erythroid progenitor cell | 1.14e-10 | 9 |
myeloid lineage restricted progenitor cell | 1.45e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.90e-11 | 1 |
axillary lymph node | 2.90e-11 | 1 |
peripheral lymph node | 2.90e-11 | 1 |
shoulder | 2.90e-11 | 1 |
caecum | 4.58e-11 | 1 |
midgut | 4.58e-11 | 1 |
hemolymphoid system | 2.58e-07 | 48 |
immune system | 2.58e-07 | 48 |
spleen | 3.16e-07 | 6 |
cavity lining | 3.16e-07 | 6 |
serous membrane | 3.16e-07 | 6 |
gastrointestinal system mesentery | 3.16e-07 | 6 |
stomach region | 3.16e-07 | 6 |
mesentery | 3.16e-07 | 6 |
gastrointestinal system serosa | 3.16e-07 | 6 |
mesentery of stomach | 3.16e-07 | 6 |
gut mesentery | 3.16e-07 | 6 |
dorsal mesentery | 3.16e-07 | 6 |
dorsal mesogastrium | 3.16e-07 | 6 |
peritoneal cavity | 3.16e-07 | 6 |
spleen primordium | 3.16e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.