FFCP PHASE1:Hg19::chr2:21293424..21293428,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:21293424..21293428,+|id=chr2:21293424..21293428,+|ontology_enrichment_celltype=CL:0002139!2.10e-29!24;CL:0000115!1.17e-19!35;CL:0000071!1.20e-19!18;CL:0002546!1.20e-19!18;CL:0002078!2.64e-15!44;CL:0002274!8.14e-14!5;CL:0000457!8.14e-14!5;CL:0002191!8.14e-14!5;CL:0000097!8.14e-14!5;CL:0000831!8.14e-14!5;CL:0002028!8.14e-14!5;CL:0002543!4.53e-12!6;CL:0005020!1.10e-11!6;CL:0002138!1.10e-11!6;CL:0005022!1.10e-11!6;CL:0000213!1.93e-11!57;CL:0000215!1.93e-11!57;CL:0000181!1.82e-10!12;CL:0000417!1.82e-10!12;CL:0000668!1.82e-10!12;CL:0000414!1.82e-10!12;CL:0000412!1.82e-10!12;CL:0000182!1.82e-10!12;CL:1000413!6.54e-08!9;CL:0000163!6.69e-08!9|ontology_enrichment_celltype_v019=CL:0000182;3.14e-14;12!CL:0002543;6.33e-08;6!CL:0002138;6.33e-08;6!CL:0002139;1.27e-07;24|ontology_enrichment_celltype_v019_2=CL:0000182,3.14e-14,12;CL:0002543,5.54e-08,6;CL:0005020,7.25e-08,6;CL:0002138,7.25e-08,6;CL:0005022,7.25e-08,6;CL:0002139,1.27e-07,24|ontology_enrichment_development_v019=UBERON:0004161;5.34e-33;11!UBERON:0009497;4.39e-28;13!UBERON:0001041;1.07e-12;30!UBERON:0003104;4.69e-12;31!CL:0005022;6.33e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.20e-19!18;UBERON:0004638!1.20e-19!18;UBERON:0004852!1.20e-19!18;UBERON:0000487!6.17e-16!22;UBERON:0002107!5.90e-14!19;UBERON:0006925!5.90e-14!19;UBERON:0008836!5.90e-14!19;UBERON:0006914!6.27e-14!25;UBERON:0005057!1.80e-13!26;UBERON:0008835!5.53e-12!22;UBERON:0003894!5.53e-12!22;UBERON:0009854!1.93e-11!23;UBERON:0007499!1.75e-10!25;UBERON:0009497!1.75e-10!25;UBERON:0000015!1.75e-10!25;UBERON:0002423!1.75e-10!25;UBERON:0006235!1.75e-10!25;UBERON:0004161!1.75e-10!25;UBERON:0009856!4.64e-10!26;UBERON:0000055!3.62e-09!69;UBERON:0001473!6.89e-09!8;UBERON:0004536!6.89e-09!8;UBERON:0006558!6.89e-09!8;UBERON:0002405!1.78e-08!115;UBERON:0003914!2.12e-08!118;UBERON:0002365!2.37e-08!31;UBERON:0002330!2.37e-08!31;UBERON:0001638!3.32e-08!9;UBERON:0003920!3.32e-08!9;UBERON:0004582!3.32e-08!9;UBERON:0003915!6.54e-08!9;UBERON:0004700!6.54e-08!9;UBERON:0001917!6.54e-08!9;UBERON:0002049!8.41e-08!79;UBERON:0007798!8.41e-08!79;UBERON:0002368!2.46e-07!35;UBERON:0002465!3.34e-07!10;UBERON:0000490!7.66e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;1.58e-19;19!UBERON:0006925;1.58e-19;19!UBERON:0002423;4.61e-15;25!UBERON:0002365;4.69e-12;31!UBERON:0002330;4.69e-12;31!UBERON:0002368;8.99e-11;33!UBERON:0000949;4.44e-08;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-19,19;UBERON:0006925,1.58e-19,19;UBERON:0008836,1.58e-19,19;UBERON:0008835,5.41e-17,22;UBERON:0003894,5.41e-17,22;UBERON:0009854,2.71e-16,23;UBERON:0007499,4.61e-15,25;UBERON:0009497,4.61e-15,25;UBERON:0000015,4.61e-15,25;UBERON:0002423,4.61e-15,25;UBERON:0006235,4.61e-15,25;UBERON:0004161,4.61e-15,25;UBERON:0009856,1.62e-14,26;UBERON:0002365,2.58e-12,31;UBERON:0002330,2.58e-12,31;UBERON:0002368,5.30e-11,35;UBERON:0000949,9.88e-09,45;UBERON:0003929,2.12e-07,54;UBERON:0005172,2.12e-07,54;UBERON:0005173,2.12e-07,54;UBERON:0002530,7.84e-07,59;UBERON:0002417,9.92e-07,60;UBERON:0000916,9.92e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,1.00416183829401,0.805658634218294,0,0,0,0,0,0,0,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.906574442192831,1.48287796479207,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:21293424..21293428,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:21293424..21293428,+ | |||
|id=chr2:21293424..21293428,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.10e-29!24;CL:0000115!1.17e-19!35;CL:0000071!1.20e-19!18;CL:0002546!1.20e-19!18;CL:0002078!2.64e-15!44;CL:0002274!8.14e-14!5;CL:0000457!8.14e-14!5;CL:0002191!8.14e-14!5;CL:0000097!8.14e-14!5;CL:0000831!8.14e-14!5;CL:0002028!8.14e-14!5;CL:0002543!4.53e-12!6;CL:0005020!1.10e-11!6;CL:0002138!1.10e-11!6;CL:0005022!1.10e-11!6;CL:0000213!1.93e-11!57;CL:0000215!1.93e-11!57;CL:0000181!1.82e-10!12;CL:0000417!1.82e-10!12;CL:0000668!1.82e-10!12;CL:0000414!1.82e-10!12;CL:0000412!1.82e-10!12;CL:0000182!1.82e-10!12;CL:1000413!6.54e-08!9;CL:0000163!6.69e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.14e-14;12!CL:0002543;6.33e-08;6!CL:0002138;6.33e-08;6!CL:0002139;1.27e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.14e-14,12;CL:0002543,5.54e-08,6;CL:0005020,7.25e-08,6;CL:0002138,7.25e-08,6;CL:0005022,7.25e-08,6;CL:0002139,1.27e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.34e-33;11!UBERON:0009497;4.39e-28;13!UBERON:0001041;1.07e-12;30!UBERON:0003104;4.69e-12;31!CL:0005022;6.33e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.20e-19!18;UBERON:0004638!1.20e-19!18;UBERON:0004852!1.20e-19!18;UBERON:0000487!6.17e-16!22;UBERON:0002107!5.90e-14!19;UBERON:0006925!5.90e-14!19;UBERON:0008836!5.90e-14!19;UBERON:0006914!6.27e-14!25;UBERON:0005057!1.80e-13!26;UBERON:0008835!5.53e-12!22;UBERON:0003894!5.53e-12!22;UBERON:0009854!1.93e-11!23;UBERON:0007499!1.75e-10!25;UBERON:0009497!1.75e-10!25;UBERON:0000015!1.75e-10!25;UBERON:0002423!1.75e-10!25;UBERON:0006235!1.75e-10!25;UBERON:0004161!1.75e-10!25;UBERON:0009856!4.64e-10!26;UBERON:0000055!3.62e-09!69;UBERON:0001473!6.89e-09!8;UBERON:0004536!6.89e-09!8;UBERON:0006558!6.89e-09!8;UBERON:0002405!1.78e-08!115;UBERON:0003914!2.12e-08!118;UBERON:0002365!2.37e-08!31;UBERON:0002330!2.37e-08!31;UBERON:0001638!3.32e-08!9;UBERON:0003920!3.32e-08!9;UBERON:0004582!3.32e-08!9;UBERON:0003915!6.54e-08!9;UBERON:0004700!6.54e-08!9;UBERON:0001917!6.54e-08!9;UBERON:0002049!8.41e-08!79;UBERON:0007798!8.41e-08!79;UBERON:0002368!2.46e-07!35;UBERON:0002465!3.34e-07!10;UBERON:0000490!7.66e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.58e-19;19!UBERON:0006925;1.58e-19;19!UBERON:0002423;4.61e-15;25!UBERON:0002365;4.69e-12;31!UBERON:0002330;4.69e-12;31!UBERON:0002368;8.99e-11;33!UBERON:0000949;4.44e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-19,19;UBERON:0006925,1.58e-19,19;UBERON:0008836,1.58e-19,19;UBERON:0008835,5.41e-17,22;UBERON:0003894,5.41e-17,22;UBERON:0009854,2.71e-16,23;UBERON:0007499,4.61e-15,25;UBERON:0009497,4.61e-15,25;UBERON:0000015,4.61e-15,25;UBERON:0002423,4.61e-15,25;UBERON:0006235,4.61e-15,25;UBERON:0004161,4.61e-15,25;UBERON:0009856,1.62e-14,26;UBERON:0002365,2.58e-12,31;UBERON:0002330,2.58e-12,31;UBERON:0002368,5.30e-11,35;UBERON:0000949,9.88e-09,45;UBERON:0003929,2.12e-07,54;UBERON:0005172,2.12e-07,54;UBERON:0005173,2.12e-07,54;UBERON:0002530,7.84e-07,59;UBERON:0002417,9.92e-07,60;UBERON:0000916,9.92e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,1.00416183829401,0.805658634218294,0,0,0,0,0,0,0,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10296455230113,0.906574442192831,1.48287796479207,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:21293424..21293428,+ | |||
}} |
Revision as of 16:29, 12 September 2013
Short description: | p@chr2:21293424..21293428, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:21293424..21293428, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.14e-14 | 12 |
vein endothelial cell | 5.54e-08 | 6 |
lymphangioblast | 7.25e-08 | 6 |
endothelial cell of lymphatic vessel | 7.25e-08 | 6 |
vascular lymphangioblast | 7.25e-08 | 6 |
endothelial cell of vascular tree | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
liver | 1.58e-19 | 19 |
digestive gland | 1.58e-19 | 19 |
liver bud | 1.58e-19 | 19 |
hepatic diverticulum | 5.41e-17 | 22 |
liver primordium | 5.41e-17 | 22 |
digestive tract diverticulum | 2.71e-16 | 23 |
epithelial sac | 4.61e-15 | 25 |
epithelium of foregut-midgut junction | 4.61e-15 | 25 |
anatomical boundary | 4.61e-15 | 25 |
hepatobiliary system | 4.61e-15 | 25 |
foregut-midgut junction | 4.61e-15 | 25 |
septum transversum | 4.61e-15 | 25 |
sac | 1.62e-14 | 26 |
exocrine gland | 2.58e-12 | 31 |
exocrine system | 2.58e-12 | 31 |
endocrine gland | 5.30e-11 | 35 |
endocrine system | 9.88e-09 | 45 |
gut epithelium | 2.12e-07 | 54 |
abdomen element | 2.12e-07 | 54 |
abdominal segment element | 2.12e-07 | 54 |
gland | 7.84e-07 | 59 |
abdominal segment of trunk | 9.92e-07 | 60 |
abdomen | 9.92e-07 | 60 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.