FFCP PHASE1:Mm9::chr10:25255920..25255961,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100504474|HGNC=|MCL_coexpression_id=166|UniProt=|association_with_transcript=116bp_to_NM_001195596,uc007erv.2_5end|description=CAGE_peak_1_at_2010003K15Rik_5end|id=chr10:25255920..25255961,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.26e-15!22;UBERON:0007499!1.26e-15!22;UBERON:0006925!1.26e-15!22;UBERON:0009497!1.26e-15!22;UBERON:0000015!1.26e-15!22;UBERON:0002423!1.26e-15!22;UBERON:0006235!1.26e-15!22;UBERON:0008835!1.26e-15!22;UBERON:0003894!1.26e-15!22;UBERON:0004161!1.26e-15!22;UBERON:0008836!1.26e-15!22;UBERON:0009854!1.56e-14!23;UBERON:0009856!1.56e-14!23;UBERON:0000160!1.10e-12!43;UBERON:0002365!1.25e-12!25;UBERON:0002330!1.25e-12!25;UBERON:0005409!5.05e-12!59;UBERON:0004119!7.65e-11!130;UBERON:0000925!7.65e-11!130;UBERON:0006595!7.65e-11!130;UBERON:0005172!2.55e-10!49;UBERON:0005173!2.55e-10!49;UBERON:0002417!2.55e-10!49;UBERON:0000916!2.55e-10!49;UBERON:0001007!2.79e-10!128;UBERON:0001555!2.79e-10!128;UBERON:0007026!2.79e-10!128;UBERON:0000344!1.68e-09!15;UBERON:0004921!2.05e-09!126;UBERON:0004185!2.05e-09!126;UBERON:0001242!2.79e-08!13;UBERON:0000060!2.79e-08!13;UBERON:0001262!2.79e-08!13;UBERON:0004786!2.79e-08!13;UBERON:0004923!5.19e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.99e-18,22;UBERON:0007499,1.99e-18,22;UBERON:0006925,1.99e-18,22;UBERON:0009497,1.99e-18,22;UBERON:0000015,1.99e-18,22;UBERON:0002423,1.99e-18,22;UBERON:0006235,1.99e-18,22;UBERON:0008835,1.99e-18,22;UBERON:0003894,1.99e-18,22;UBERON:0004161,1.99e-18,22;UBERON:0008836,1.99e-18,22;UBERON:0000160,9.46e-18,31;UBERON:0009854,2.88e-17,23;UBERON:0009856,2.88e-17,23;UBERON:0002365,3.09e-15,25;UBERON:0002330,3.09e-15,25;UBERON:0005409,2.51e-13,47;UBERON:0004119,5.41e-13,118;UBERON:0000925,5.41e-13,118;UBERON:0006595,5.41e-13,118;UBERON:0001007,2.58e-12,116;UBERON:0001555,2.58e-12,116;UBERON:0007026,2.58e-12,116;UBERON:0004921,2.93e-11,114;UBERON:0000344,5.42e-11,15;UBERON:0001242,1.52e-09,13;UBERON:0001262,1.52e-09,13;UBERON:0004786,1.52e-09,13;UBERON:0003929,8.89e-09,55;UBERON:0004923,7.27e-08,24;UBERON:0005172,4.78e-07,49;UBERON:0005173,4.78e-07,49;UBERON:0002417,4.78e-07,49;UBERON:0000916,4.78e-07,49|phase1_expression=0,33.5016391333787,24.5699589270349,36.2957053568196,35.0627010962443,5.20425742926858,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,23.5188861506308,25.0056116363215,44.2158612368566,27.9995297503399,21.331652035903,33.2540984048654,33.5200072580708,7.09537634096975,0,0,0,6.06588401477677,3.65716219788683,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.6254326188832,23.7989966797713,64.2246798049002,74.7242880064819,74.8204901452551,22.8924404814756,0,0,0,0,0,0,0,0,0,0,41.7912999771759,0,0.29688427812965,0.346970653532272,0.913396434936424,1.84492397804847,1.20578112442098,0.352766121407114,0.502666365318702,27.1914464507811,0,0,0,0,0,0,0,0,30.654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20563854268572,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.1274748520026,27.7673094996721,0,0,0.257734922644187,15.1262643467507,25.5734750421601,48.6977602848151,34.1660924312048,63.7384954781922,53.0317290568569,47.1526838737527,38.6028892495858,31.4586793028978,35.8789162791992,38.0359831915841,0,0.799739588268102,0,0,0.969762435838129,0.350679099451593,0.505892296994058,1.91893192373483,4.23896565171712,6.04646103216823,58.1047149090812,2.00214126859313,2.35870794135844,7.87017393346988,10.1430060694251,20.258881419203,38.7031294707758,39.4143708307611,28.6979351391813,64.2473706860111,46.0058260887535,84.4759951207503,96.7316786655138,69.96434919135,78.2172722955537,90.2169384949497,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,9.04499026088774,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,1.87737366450968,3.38931313382112,0,0,0,0,0,0.164140899745061,42.8476829845881,0,0,0,0,0.188368457004691,0,0,0,0,0,1.90934123603023,0,0.203319467126849,1.83609079397062,1.25452977608681,4.36725127492355,1.75323650300267,7.93473174963225,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,1.43224823328345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,3.64660075602441,3.35381060204772,8.08911437180062,5.33392146723877,8.24140228955577,6.73930340142812,6.82282471762253,6.84394109703647,7.1678009726709,4.96299989590377,6.59459069770154,6.43277252302869,5.23923060411381,7.06894388263618,5.78727661391115,8.24171801606613,5.5935589651071,2.74295401908332,6.21165321557681,6.43777712857767,6.39524233182245,7.52875043322645,4.39995961036718,5.67076715905595,7.10288220882176,5.70377278152619,3.36685362994643,7.11810108745045,5.02372860115374,9.41231399290286,5.57772628269478,6.94463799532109,0,5.84829021113521,5.58664740525576,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p1@2010003K15Rik}} | ||
|EntrezGene=100504474 | |||
|HGNC= | |||
|MCL_coexpression_id=166 | |||
|UniProt= | |||
|association_with_transcript=116bp_to_NM_001195596,uc007erv.2_5end | |||
|description=CAGE_peak_1_at_2010003K15Rik_5end | |||
|id=chr10:25255920..25255961,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.26e-15!22;UBERON:0007499!1.26e-15!22;UBERON:0006925!1.26e-15!22;UBERON:0009497!1.26e-15!22;UBERON:0000015!1.26e-15!22;UBERON:0002423!1.26e-15!22;UBERON:0006235!1.26e-15!22;UBERON:0008835!1.26e-15!22;UBERON:0003894!1.26e-15!22;UBERON:0004161!1.26e-15!22;UBERON:0008836!1.26e-15!22;UBERON:0009854!1.56e-14!23;UBERON:0009856!1.56e-14!23;UBERON:0000160!1.10e-12!43;UBERON:0002365!1.25e-12!25;UBERON:0002330!1.25e-12!25;UBERON:0005409!5.05e-12!59;UBERON:0004119!7.65e-11!130;UBERON:0000925!7.65e-11!130;UBERON:0006595!7.65e-11!130;UBERON:0005172!2.55e-10!49;UBERON:0005173!2.55e-10!49;UBERON:0002417!2.55e-10!49;UBERON:0000916!2.55e-10!49;UBERON:0001007!2.79e-10!128;UBERON:0001555!2.79e-10!128;UBERON:0007026!2.79e-10!128;UBERON:0000344!1.68e-09!15;UBERON:0004921!2.05e-09!126;UBERON:0004185!2.05e-09!126;UBERON:0001242!2.79e-08!13;UBERON:0000060!2.79e-08!13;UBERON:0001262!2.79e-08!13;UBERON:0004786!2.79e-08!13;UBERON:0004923!5.19e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.99e-18,22;UBERON:0007499,1.99e-18,22;UBERON:0006925,1.99e-18,22;UBERON:0009497,1.99e-18,22;UBERON:0000015,1.99e-18,22;UBERON:0002423,1.99e-18,22;UBERON:0006235,1.99e-18,22;UBERON:0008835,1.99e-18,22;UBERON:0003894,1.99e-18,22;UBERON:0004161,1.99e-18,22;UBERON:0008836,1.99e-18,22;UBERON:0000160,9.46e-18,31;UBERON:0009854,2.88e-17,23;UBERON:0009856,2.88e-17,23;UBERON:0002365,3.09e-15,25;UBERON:0002330,3.09e-15,25;UBERON:0005409,2.51e-13,47;UBERON:0004119,5.41e-13,118;UBERON:0000925,5.41e-13,118;UBERON:0006595,5.41e-13,118;UBERON:0001007,2.58e-12,116;UBERON:0001555,2.58e-12,116;UBERON:0007026,2.58e-12,116;UBERON:0004921,2.93e-11,114;UBERON:0000344,5.42e-11,15;UBERON:0001242,1.52e-09,13;UBERON:0001262,1.52e-09,13;UBERON:0004786,1.52e-09,13;UBERON:0003929,8.89e-09,55;UBERON:0004923,7.27e-08,24;UBERON:0005172,4.78e-07,49;UBERON:0005173,4.78e-07,49;UBERON:0002417,4.78e-07,49;UBERON:0000916,4.78e-07,49 | |||
|phase1_expression=0,33.5016391333787,24.5699589270349,36.2957053568196,35.0627010962443,5.20425742926858,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,23.5188861506308,25.0056116363215,44.2158612368566,27.9995297503399,21.331652035903,33.2540984048654,33.5200072580708,7.09537634096975,0,0,0,6.06588401477677,3.65716219788683,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.6254326188832,23.7989966797713,64.2246798049002,74.7242880064819,74.8204901452551,22.8924404814756,0,0,0,0,0,0,0,0,0,0,41.7912999771759,0,0.29688427812965,0.346970653532272,0.913396434936424,1.84492397804847,1.20578112442098,0.352766121407114,0.502666365318702,27.1914464507811,0,0,0,0,0,0,0,0,30.654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20563854268572,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.1274748520026,27.7673094996721,0,0,0.257734922644187,15.1262643467507,25.5734750421601,48.6977602848151,34.1660924312048,63.7384954781922,53.0317290568569,47.1526838737527,38.6028892495858,31.4586793028978,35.8789162791992,38.0359831915841,0,0.799739588268102,0,0,0.969762435838129,0.350679099451593,0.505892296994058,1.91893192373483,4.23896565171712,6.04646103216823,58.1047149090812,2.00214126859313,2.35870794135844,7.87017393346988,10.1430060694251,20.258881419203,38.7031294707758,39.4143708307611,28.6979351391813,64.2473706860111,46.0058260887535,84.4759951207503,96.7316786655138,69.96434919135,78.2172722955537,90.2169384949497,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0,0,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,9.04499026088774,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,1.87737366450968,3.38931313382112,0,0,0,0,0,0.164140899745061,42.8476829845881,0,0,0,0,0.188368457004691,0,0,0,0,0,1.90934123603023,0,0.203319467126849,1.83609079397062,1.25452977608681,4.36725127492355,1.75323650300267,7.93473174963225,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,1.43224823328345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,3.64660075602441,3.35381060204772,8.08911437180062,5.33392146723877,8.24140228955577,6.73930340142812,6.82282471762253,6.84394109703647,7.1678009726709,4.96299989590377,6.59459069770154,6.43277252302869,5.23923060411381,7.06894388263618,5.78727661391115,8.24171801606613,5.5935589651071,2.74295401908332,6.21165321557681,6.43777712857767,6.39524233182245,7.52875043322645,4.39995961036718,5.67076715905595,7.10288220882176,5.70377278152619,3.36685362994643,7.11810108745045,5.02372860115374,9.41231399290286,5.57772628269478,6.94463799532109,0,5.84829021113521,5.58664740525576,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p1@2010003K15Rik | |||
}} |
Revision as of 16:30, 12 September 2013
Short description: | p1@2010003K15Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2010003K15Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 116bp_to_NM_001195596, uc007erv.2_5end |
EntrezGene: | 2010003K15Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.99e-18 | 22 |
epithelial sac | 1.99e-18 | 22 |
digestive gland | 1.99e-18 | 22 |
epithelium of foregut-midgut junction | 1.99e-18 | 22 |
anatomical boundary | 1.99e-18 | 22 |
hepatobiliary system | 1.99e-18 | 22 |
foregut-midgut junction | 1.99e-18 | 22 |
hepatic diverticulum | 1.99e-18 | 22 |
liver primordium | 1.99e-18 | 22 |
septum transversum | 1.99e-18 | 22 |
liver bud | 1.99e-18 | 22 |
intestine | 9.46e-18 | 31 |
digestive tract diverticulum | 2.88e-17 | 23 |
sac | 2.88e-17 | 23 |
exocrine gland | 3.09e-15 | 25 |
exocrine system | 3.09e-15 | 25 |
gastrointestinal system | 2.51e-13 | 47 |
endoderm-derived structure | 5.41e-13 | 118 |
endoderm | 5.41e-13 | 118 |
presumptive endoderm | 5.41e-13 | 118 |
digestive system | 2.58e-12 | 116 |
digestive tract | 2.58e-12 | 116 |
primitive gut | 2.58e-12 | 116 |
subdivision of digestive tract | 2.93e-11 | 114 |
mucosa | 5.42e-11 | 15 |
intestinal mucosa | 1.52e-09 | 13 |
wall of intestine | 1.52e-09 | 13 |
gastrointestinal system mucosa | 1.52e-09 | 13 |
gut epithelium | 8.89e-09 | 55 |
organ component layer | 7.27e-08 | 24 |
abdomen element | 4.78e-07 | 49 |
abdominal segment element | 4.78e-07 | 49 |
abdominal segment of trunk | 4.78e-07 | 49 |
abdomen | 4.78e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.