FFCP PHASE1:Hg19::chr2:235904638..235904641,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:235904638..235904641,-|id=chr2:235904638..235904641,-|ontology_enrichment_celltype=CL:0000128!4.19e-18!7;CL:0000126!4.19e-18!7;CL:0000127!4.19e-18!7;CL:0002453!4.19e-18!7;CL:0002603!4.02e-16!3;CL:0000064!1.00e-14!3;CL:0005012!1.00e-14!3;CL:0000067!1.00e-14!3;CL:0002304!1.00e-14!3;CL:0000243!3.10e-10!15;CL:0000125!3.10e-10!15;CL:0000030!3.10e-10!15;CL:0000339!3.10e-10!15;CL:0000095!4.32e-09!17;CL:0000123!4.32e-09!17;CL:0000346!4.59e-08!3;CL:1000428!4.59e-08!3;CL:0000133!8.69e-08!59;CL:0002605!1.18e-07!3|ontology_enrichment_celltype_v019=CL:0000346;5.50e-34;3!CL:1000428;5.50e-34;3!CL:0000319;6.72e-26;1!CL:0002559;7.35e-21;5!CL:0000159;1.14e-13;2!CL:0000062;5.83e-12;9|ontology_enrichment_celltype_v019_2=CL:0000346,5.51e-34,3;CL:1000428,5.51e-34,3;CL:0000319,9.79e-26,1;CL:0002559,7.35e-21,5;CL:0000159,1.37e-13,2;CL:0000062,4.83e-10,11;CL:0000375,4.83e-10,11;CL:0000335,4.83e-10,11|ontology_enrichment_development_v019=UBERON:0006298;2.45e-26;1!UBERON:0005754;6.72e-26;1!UBERON:0007297;1.14e-13;2!CL:0000335;5.79e-10;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;6.72e-26;1|ontology_enrichment_disease_v019_2=DOID:3030,9.79e-26,1|ontology_enrichment_uberon=UBERON:0001778!1.00e-14!3;UBERON:0001775!1.00e-14!3;UBERON:0000488!3.53e-11!4;UBERON:0002037!2.75e-08!6;UBERON:0006215!2.75e-08!6;UBERON:0000412!4.59e-08!3;UBERON:0001992!4.59e-08!3;UBERON:0002203!1.31e-07!6;UBERON:0001768!1.31e-07!6;UBERON:0002200!4.07e-07!11;UBERON:0006876!4.07e-07!11;UBERON:0004733!7.41e-07!12;UBERON:0002028!7.41e-07!12;UBERON:0007277!7.41e-07!12|ontology_enrichment_uberon_v019=UBERON:0000412;5.50e-34;3!UBERON:0001992;5.50e-34;3!UBERON:0001736;2.45e-26;1!UBERON:0000998;6.72e-26;1!UBERON:0006868;6.72e-26;1!UBERON:0002073;7.35e-21;5!UBERON:0001829;6.85e-14;2!UBERON:0002067;4.67e-12;9!UBERON:0006947;1.47e-09;3!UBERON:0004054;1.47e-09;3!UBERON:0001003;1.31e-07;15!UBERON:0007376;1.31e-07;15!UBERON:0005904;1.75e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.51e-34,3;UBERON:0001992,5.51e-34,3;UBERON:0001736,2.78e-26,1;UBERON:0006298,2.78e-26,1;UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0002073,7.35e-21,5;UBERON:0005086,7.35e-21,5;UBERON:0001829,7.30e-14,2;UBERON:0002067,4.67e-12,9;UBERON:0004016,4.67e-12,9;UBERON:0010083,4.67e-12,9;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0001003,1.31e-07,15;UBERON:0007376,1.31e-07,15;UBERON:0007383,1.31e-07,15;UBERON:0005904,1.69e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.816002764977012,0.313454721478088,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92295876118521,1.81520899825294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:235904638..235904641,- | |||
|id=chr2:235904638..235904641,- | |||
|ontology_enrichment_celltype=CL:0000128!4.19e-18!7;CL:0000126!4.19e-18!7;CL:0000127!4.19e-18!7;CL:0002453!4.19e-18!7;CL:0002603!4.02e-16!3;CL:0000064!1.00e-14!3;CL:0005012!1.00e-14!3;CL:0000067!1.00e-14!3;CL:0002304!1.00e-14!3;CL:0000243!3.10e-10!15;CL:0000125!3.10e-10!15;CL:0000030!3.10e-10!15;CL:0000339!3.10e-10!15;CL:0000095!4.32e-09!17;CL:0000123!4.32e-09!17;CL:0000346!4.59e-08!3;CL:1000428!4.59e-08!3;CL:0000133!8.69e-08!59;CL:0002605!1.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.50e-34;3!CL:1000428;5.50e-34;3!CL:0000319;6.72e-26;1!CL:0002559;7.35e-21;5!CL:0000159;1.14e-13;2!CL:0000062;5.83e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.51e-34,3;CL:1000428,5.51e-34,3;CL:0000319,9.79e-26,1;CL:0002559,7.35e-21,5;CL:0000159,1.37e-13,2;CL:0000062,4.83e-10,11;CL:0000375,4.83e-10,11;CL:0000335,4.83e-10,11 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.45e-26;1!UBERON:0005754;6.72e-26;1!UBERON:0007297;1.14e-13;2!CL:0000335;5.79e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;6.72e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.79e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.00e-14!3;UBERON:0001775!1.00e-14!3;UBERON:0000488!3.53e-11!4;UBERON:0002037!2.75e-08!6;UBERON:0006215!2.75e-08!6;UBERON:0000412!4.59e-08!3;UBERON:0001992!4.59e-08!3;UBERON:0002203!1.31e-07!6;UBERON:0001768!1.31e-07!6;UBERON:0002200!4.07e-07!11;UBERON:0006876!4.07e-07!11;UBERON:0004733!7.41e-07!12;UBERON:0002028!7.41e-07!12;UBERON:0007277!7.41e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.50e-34;3!UBERON:0001992;5.50e-34;3!UBERON:0001736;2.45e-26;1!UBERON:0000998;6.72e-26;1!UBERON:0006868;6.72e-26;1!UBERON:0002073;7.35e-21;5!UBERON:0001829;6.85e-14;2!UBERON:0002067;4.67e-12;9!UBERON:0006947;1.47e-09;3!UBERON:0004054;1.47e-09;3!UBERON:0001003;1.31e-07;15!UBERON:0007376;1.31e-07;15!UBERON:0005904;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.51e-34,3;UBERON:0001992,5.51e-34,3;UBERON:0001736,2.78e-26,1;UBERON:0006298,2.78e-26,1;UBERON:0000998,5.93e-26,1;UBERON:0006868,5.93e-26,1;UBERON:0002073,7.35e-21,5;UBERON:0005086,7.35e-21,5;UBERON:0001829,7.30e-14,2;UBERON:0002067,4.67e-12,9;UBERON:0004016,4.67e-12,9;UBERON:0010083,4.67e-12,9;UBERON:0006947,1.41e-09,3;UBERON:0004054,1.41e-09,3;UBERON:0001003,1.31e-07,15;UBERON:0007376,1.31e-07,15;UBERON:0007383,1.31e-07,15;UBERON:0005904,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.861847406537515,0.816002764977012,0.313454721478088,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92295876118521,1.81520899825294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0.202056159043763,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:235904638..235904641,- | |||
}} |
Revision as of 17:33, 12 September 2013
Short description: | p@chr2:235904638..235904641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:235904638..235904641, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.51e-34 | 3 |
stem cell of epidermis | 5.51e-34 | 3 |
mucus secreting cell | 9.79e-26 | 1 |
hair follicle cell | 7.35e-21 | 5 |
seromucus secreting cell | 1.37e-13 | 2 |
osteoblast | 4.83e-10 | 11 |
osteoprogenitor cell | 4.83e-10 | 11 |
mesenchyme condensation cell | 4.83e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.51e-34 | 3 |
papillary layer of dermis | 5.51e-34 | 3 |
submandibular gland | 2.78e-26 | 1 |
submandibular gland primordium | 2.78e-26 | 1 |
seminal vesicle | 5.93e-26 | 1 |
seminal fluid secreting gland | 5.93e-26 | 1 |
hair follicle | 7.35e-21 | 5 |
hair follicle placode | 7.35e-21 | 5 |
major salivary gland | 7.30e-14 | 2 |
dermis | 4.67e-12 | 9 |
dermatome | 4.67e-12 | 9 |
future dermis | 4.67e-12 | 9 |
male genital duct | 1.41e-09 | 3 |
internal male genitalia | 1.41e-09 | 3 |
skin epidermis | 1.31e-07 | 15 |
outer epithelium | 1.31e-07 | 15 |
enveloping layer of ectoderm | 1.31e-07 | 15 |
duct of male reproductive system | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.79e-26 | 1 |
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