FFCP PHASE1:Mm9::chr11:120434178..120434195,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18453|HGNC=|MCL_coexpression_id=597|UniProt=E9Q8G8|association_with_transcript=-23bp_to_ENSMUST00000168360_5end|description=CAGE_peak_1_at_P4hb_5end|id=chr11:120434178..120434195,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.54e-18!43;UBERON:0005409!1.28e-16!59;UBERON:0004119!1.04e-14!130;UBERON:0000925!1.04e-14!130;UBERON:0006595!1.04e-14!130;UBERON:0001007!7.77e-14!128;UBERON:0001555!7.77e-14!128;UBERON:0007026!7.77e-14!128;UBERON:0004921!5.61e-13!126;UBERON:0004185!5.61e-13!126;UBERON:0002108!3.01e-09!16;UBERON:0002365!4.84e-09!25;UBERON:0002330!4.84e-09!25;UBERON:0005256!8.92e-09!47;UBERON:0009854!4.16e-08!23;UBERON:0009856!4.16e-08!23;UBERON:0002107!5.52e-08!22;UBERON:0007499!5.52e-08!22;UBERON:0006925!5.52e-08!22;UBERON:0009497!5.52e-08!22;UBERON:0000015!5.52e-08!22;UBERON:0002423!5.52e-08!22;UBERON:0006235!5.52e-08!22;UBERON:0008835!5.52e-08!22;UBERON:0003894!5.52e-08!22;UBERON:0004161!5.52e-08!22;UBERON:0008836!5.52e-08!22;UBERON:0001045!1.51e-07!13;UBERON:0001264!1.65e-07!12;UBERON:0003922!1.65e-07!12;UBERON:0002114!1.65e-07!12;UBERON:0003923!1.65e-07!12;UBERON:0003924!1.65e-07!12;UBERON:0003921!1.65e-07!12;UBERON:0002100!4.69e-07!98;UBERON:0000344!9.03e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.47e-12,31;UBERON:0005409,1.42e-10,47;UBERON:0004119,1.57e-09,118;UBERON:0000925,1.57e-09,118;UBERON:0006595,1.57e-09,118;UBERON:0002100,4.40e-09,90;UBERON:0002365,4.84e-09,25;UBERON:0002330,4.84e-09,25;UBERON:0001007,7.90e-09,116;UBERON:0001555,7.90e-09,116;UBERON:0007026,7.90e-09,116;UBERON:0005256,1.09e-08,45;UBERON:0004921,3.83e-08,114;UBERON:0009854,4.16e-08,23;UBERON:0009856,4.16e-08,23;UBERON:0002107,5.52e-08,22;UBERON:0007499,5.52e-08,22;UBERON:0006925,5.52e-08,22;UBERON:0009497,5.52e-08,22;UBERON:0000015,5.52e-08,22;UBERON:0002423,5.52e-08,22;UBERON:0006235,5.52e-08,22;UBERON:0008835,5.52e-08,22;UBERON:0003894,5.52e-08,22;UBERON:0004161,5.52e-08,22;UBERON:0008836,5.52e-08,22;UBERON:0003104,7.50e-08,61;UBERON:0009142,7.50e-08,61;UBERON:0001264,1.65e-07,12;UBERON:0005177,1.76e-07,79;UBERON:0000344,9.03e-07,15|phase1_expression=278.979291656551,2514.3678120416,2608.51063942021,2658.96288159834,3054.46216121283,542.75368609114,664.861575134866,46.7426430858506,290.024767632434,238.745816848433,130.810527724286,141.356265739736,47.5938029208752,38.6398178691969,92.9376235465699,65.197036099524,55.9649502502517,60.0955425007443,59.3705497512849,63.6584477697045,129.776060770532,179.120875966397,190.675846071423,1061.70971765705,1270.23918926892,2001.77262690496,1374.56152974361,1137.25716611612,995.912741370856,1065.83541875475,843.90632355409,154.94748432415,151.921002533389,126.785344812351,251.58976080336,335.627748978796,287.266284261153,198.383992969294,260.966005070949,220.927019956943,144.116714567599,148.220870235983,183.522913445776,401.35905570614,382.19103069757,493.924310067085,385.718932763583,264.464514689482,363.580632425551,314.976436500339,492.3322448564,287.505128729943,62.7506946655934,72.5362142011344,80.6625117941914,805.736553664586,683.955321133812,592.507234026781,75.8686728223492,84.6385566835253,117.258809648643,684.465954779647,756.78987149058,272.219664477623,183.929143437457,252.930920920812,159.387258795791,134.476406862544,73.3085559020937,70.4730998091425,85.3919343086611,109.689978011061,106.900373820581,74.8418783203369,73.9927036260785,90.083441087782,59.4625757396699,56.5654907717382,53.1478605066602,85.066655585975,88.651526650735,81.7833991774113,75.3794097303729,71.4708514740233,66.3144395351356,90.1563471549423,100.799150005765,109.043675807801,254.970092952831,279.010199914252,170.150454867885,1393.88668070985,1980.07652375697,1553.80548872528,1933.73461832426,1374.99451650172,425.546592999208,327.055789027293,363.440620439413,371.006553235857,345.348065292421,299.000692375361,328.698759221573,476.414691112732,219.738406626382,218.14284417406,254.784320287451,616.821318242362,89.5925077419214,218.061502286228,345.756256244909,314.512839096442,344.770168397807,246.431517303538,177.911713896321,205.33921023269,1023.63436138804,79.0958482351917,147.729962175629,389.858108373256,199.199049651275,227.891368973554,348.552593477888,23.4224637609238,32.2547928492721,1382.27812573369,190.266417715401,339.544945742269,279.173288879523,43.8886573456131,43.0050566649509,59.8114716057235,23.6401075461496,35.5444485689159,40.7264567336738,50.6192740771404,373.241268511409,314.625228672925,542.5957623571,301.142295773544,169.807178066328,210.360425556628,185.46399369951,199.231769178815,133.487611334905,126.960696802286,152.640109307798,161.172199970407,209.963225116588,210.853279387118,245.627769332873,405.731300723441,338.939596806004,440.887242817063,421.853379636284,265.710746202688,483.824886058819,535.283646798607,595.606694733162,197.805112771404,187.620847984877,208.331805110394,184.660893756464,151.9019869089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| ||
|EntrezGene=18453 | |||
|HGNC= | |||
|MCL_coexpression_id=597 | |||
|UniProt=E9Q8G8 | |||
|association_with_transcript=-23bp_to_ENSMUST00000168360_5end | |||
|description=CAGE_peak_1_at_P4hb_5end | |||
|id=chr11:120434178..120434195,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.54e-18!43;UBERON:0005409!1.28e-16!59;UBERON:0004119!1.04e-14!130;UBERON:0000925!1.04e-14!130;UBERON:0006595!1.04e-14!130;UBERON:0001007!7.77e-14!128;UBERON:0001555!7.77e-14!128;UBERON:0007026!7.77e-14!128;UBERON:0004921!5.61e-13!126;UBERON:0004185!5.61e-13!126;UBERON:0002108!3.01e-09!16;UBERON:0002365!4.84e-09!25;UBERON:0002330!4.84e-09!25;UBERON:0005256!8.92e-09!47;UBERON:0009854!4.16e-08!23;UBERON:0009856!4.16e-08!23;UBERON:0002107!5.52e-08!22;UBERON:0007499!5.52e-08!22;UBERON:0006925!5.52e-08!22;UBERON:0009497!5.52e-08!22;UBERON:0000015!5.52e-08!22;UBERON:0002423!5.52e-08!22;UBERON:0006235!5.52e-08!22;UBERON:0008835!5.52e-08!22;UBERON:0003894!5.52e-08!22;UBERON:0004161!5.52e-08!22;UBERON:0008836!5.52e-08!22;UBERON:0001045!1.51e-07!13;UBERON:0001264!1.65e-07!12;UBERON:0003922!1.65e-07!12;UBERON:0002114!1.65e-07!12;UBERON:0003923!1.65e-07!12;UBERON:0003924!1.65e-07!12;UBERON:0003921!1.65e-07!12;UBERON:0002100!4.69e-07!98;UBERON:0000344!9.03e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.47e-12,31;UBERON:0005409,1.42e-10,47;UBERON:0004119,1.57e-09,118;UBERON:0000925,1.57e-09,118;UBERON:0006595,1.57e-09,118;UBERON:0002100,4.40e-09,90;UBERON:0002365,4.84e-09,25;UBERON:0002330,4.84e-09,25;UBERON:0001007,7.90e-09,116;UBERON:0001555,7.90e-09,116;UBERON:0007026,7.90e-09,116;UBERON:0005256,1.09e-08,45;UBERON:0004921,3.83e-08,114;UBERON:0009854,4.16e-08,23;UBERON:0009856,4.16e-08,23;UBERON:0002107,5.52e-08,22;UBERON:0007499,5.52e-08,22;UBERON:0006925,5.52e-08,22;UBERON:0009497,5.52e-08,22;UBERON:0000015,5.52e-08,22;UBERON:0002423,5.52e-08,22;UBERON:0006235,5.52e-08,22;UBERON:0008835,5.52e-08,22;UBERON:0003894,5.52e-08,22;UBERON:0004161,5.52e-08,22;UBERON:0008836,5.52e-08,22;UBERON:0003104,7.50e-08,61;UBERON:0009142,7.50e-08,61;UBERON:0001264,1.65e-07,12;UBERON:0005177,1.76e-07,79;UBERON:0000344,9.03e-07,15 | |||
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| |||
|short_description=p1@P4hb | |||
}} |
Revision as of 19:06, 12 September 2013
Short description: | p1@P4hb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_P4hb_5end |
Coexpression cluster: | MCL_coexpression_mm9:597 |
Association with transcript: | -23bp_to_ENSMUST00000168360_5end |
EntrezGene: | P4hb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.47e-12 | 31 |
gastrointestinal system | 1.42e-10 | 47 |
endoderm-derived structure | 1.57e-09 | 118 |
endoderm | 1.57e-09 | 118 |
presumptive endoderm | 1.57e-09 | 118 |
trunk | 4.40e-09 | 90 |
exocrine gland | 4.84e-09 | 25 |
exocrine system | 4.84e-09 | 25 |
digestive system | 7.90e-09 | 116 |
digestive tract | 7.90e-09 | 116 |
primitive gut | 7.90e-09 | 116 |
trunk mesenchyme | 1.09e-08 | 45 |
subdivision of digestive tract | 3.83e-08 | 114 |
digestive tract diverticulum | 4.16e-08 | 23 |
sac | 4.16e-08 | 23 |
liver | 5.52e-08 | 22 |
epithelial sac | 5.52e-08 | 22 |
digestive gland | 5.52e-08 | 22 |
epithelium of foregut-midgut junction | 5.52e-08 | 22 |
anatomical boundary | 5.52e-08 | 22 |
hepatobiliary system | 5.52e-08 | 22 |
foregut-midgut junction | 5.52e-08 | 22 |
hepatic diverticulum | 5.52e-08 | 22 |
liver primordium | 5.52e-08 | 22 |
septum transversum | 5.52e-08 | 22 |
liver bud | 5.52e-08 | 22 |
mesenchyme | 7.50e-08 | 61 |
entire embryonic mesenchyme | 7.50e-08 | 61 |
pancreas | 1.65e-07 | 12 |
trunk region element | 1.76e-07 | 79 |
mucosa | 9.03e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.