FFCP PHASE1:Mm9::chr11:5966124..5966140,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12323|HGNC=|MCL_coexpression_id=2693|UniProt=Q68EG2,P28652,Q8BL41,Q5SVI2|association_with_transcript=-373bp_to_ENSMUST00000090443,ENSMUST00000109813,NM_001174053,NM_001174054,NM_007595,uc007hxr.2,uc007hxs.2,uc007hxt.2,uc007hxw.1_5end|description=CAGE_peak_13_at_Camk2b_5end|id=chr11:5966124..5966140,-|ontology_enrichment_celltype=CL:0000117!9.80e-10!23;CL:0000337!9.80e-10!23;CL:0000540!4.61e-07!33;CL:0000047!4.61e-07!33;CL:0000031!4.61e-07!33;CL:0000404!4.61e-07!33|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!7.28e-14!50;UBERON:0006238!7.28e-14!50;UBERON:0001049!4.55e-13!52;UBERON:0005068!4.55e-13!52;UBERON:0006241!4.55e-13!52;UBERON:0007135!4.55e-13!52;UBERON:0001017!8.32e-13!73;UBERON:0005743!8.32e-13!73;UBERON:0002616!1.18e-12!49;UBERON:0000073!2.85e-12!75;UBERON:0001016!2.85e-12!75;UBERON:0002020!6.24e-12!34;UBERON:0002791!3.11e-11!29;UBERON:0003528!3.11e-11!29;UBERON:0001893!3.11e-11!29;UBERON:0003080!9.03e-11!40;UBERON:0000033!9.78e-11!63;UBERON:0002780!6.67e-10!39;UBERON:0001890!6.67e-10!39;UBERON:0006240!6.67e-10!39;UBERON:0003056!6.42e-09!49;UBERON:0002346!7.93e-09!71;UBERON:0003075!7.93e-09!71;UBERON:0007284!7.93e-09!71;UBERON:0004121!7.48e-08!102;UBERON:0000924!7.48e-08!102;UBERON:0006601!7.48e-08!102;UBERON:0000956!2.18e-07!21;UBERON:0001869!2.18e-07!21;UBERON:0000203!2.18e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.29e-17,17;UBERON:0000956,6.59e-14,21;UBERON:0001869,6.59e-14,21;UBERON:0000203,6.59e-14,21;UBERON:0001954,4.44e-11,7;UBERON:0003022,4.44e-11,7;UBERON:0002421,4.44e-11,7;UBERON:0000349,4.44e-11,7;UBERON:0002600,4.44e-11,7;UBERON:0003528,2.92e-10,29;UBERON:0002791,2.92e-10,29;UBERON:0001893,2.92e-10,29;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0002020,7.62e-09,34;UBERON:0002021,7.02e-08,10;UBERON:0000411,7.02e-08,10;UBERON:0001950,7.02e-08,10;UBERON:0002780,8.71e-08,39;UBERON:0001890,8.71e-08,39;UBERON:0006240,8.71e-08,39;UBERON:0003080,1.32e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0.753926112677186,0,0.767146371990992,0,0.811206315338788,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,4.11618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0,1.03111909406213,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.320125762024346,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0,0,0,0|short_description=p13@Camk2b}} | ||
|EntrezGene=12323 | |||
|HGNC= | |||
|MCL_coexpression_id=2693 | |||
|UniProt=Q68EG2,P28652,Q8BL41,Q5SVI2 | |||
|association_with_transcript=-373bp_to_ENSMUST00000090443,ENSMUST00000109813,NM_001174053,NM_001174054,NM_007595,uc007hxr.2,uc007hxs.2,uc007hxt.2,uc007hxw.1_5end | |||
|description=CAGE_peak_13_at_Camk2b_5end | |||
|id=chr11:5966124..5966140,- | |||
|ontology_enrichment_celltype=CL:0000117!9.80e-10!23;CL:0000337!9.80e-10!23;CL:0000540!4.61e-07!33;CL:0000047!4.61e-07!33;CL:0000031!4.61e-07!33;CL:0000404!4.61e-07!33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!7.28e-14!50;UBERON:0006238!7.28e-14!50;UBERON:0001049!4.55e-13!52;UBERON:0005068!4.55e-13!52;UBERON:0006241!4.55e-13!52;UBERON:0007135!4.55e-13!52;UBERON:0001017!8.32e-13!73;UBERON:0005743!8.32e-13!73;UBERON:0002616!1.18e-12!49;UBERON:0000073!2.85e-12!75;UBERON:0001016!2.85e-12!75;UBERON:0002020!6.24e-12!34;UBERON:0002791!3.11e-11!29;UBERON:0003528!3.11e-11!29;UBERON:0001893!3.11e-11!29;UBERON:0003080!9.03e-11!40;UBERON:0000033!9.78e-11!63;UBERON:0002780!6.67e-10!39;UBERON:0001890!6.67e-10!39;UBERON:0006240!6.67e-10!39;UBERON:0003056!6.42e-09!49;UBERON:0002346!7.93e-09!71;UBERON:0003075!7.93e-09!71;UBERON:0007284!7.93e-09!71;UBERON:0004121!7.48e-08!102;UBERON:0000924!7.48e-08!102;UBERON:0006601!7.48e-08!102;UBERON:0000956!2.18e-07!21;UBERON:0001869!2.18e-07!21;UBERON:0000203!2.18e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.29e-17,17;UBERON:0000956,6.59e-14,21;UBERON:0001869,6.59e-14,21;UBERON:0000203,6.59e-14,21;UBERON:0001954,4.44e-11,7;UBERON:0003022,4.44e-11,7;UBERON:0002421,4.44e-11,7;UBERON:0000349,4.44e-11,7;UBERON:0002600,4.44e-11,7;UBERON:0003528,2.92e-10,29;UBERON:0002791,2.92e-10,29;UBERON:0001893,2.92e-10,29;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0002020,7.62e-09,34;UBERON:0002021,7.02e-08,10;UBERON:0000411,7.02e-08,10;UBERON:0001950,7.02e-08,10;UBERON:0002780,8.71e-08,39;UBERON:0001890,8.71e-08,39;UBERON:0006240,8.71e-08,39;UBERON:0003080,1.32e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0.753926112677186,0,0.767146371990992,0,0.811206315338788,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,4.11618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,1.38097570952153,0,1.03111909406213,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0.320125762024346,0.229741875822453,0.476293691283074,0.579421629724277,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0,0,0,0 | |||
|short_description=p13@Camk2b | |||
}} |
Revision as of 20:11, 12 September 2013
Short description: | p13@Camk2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Camk2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2693 |
Association with transcript: | -373bp_to_ENSMUST00000090443, ENSMUST00000109813, NM_001174053, NM_001174054, NM_007595, uc007hxr.2, uc007hxs.2, uc007hxt.2, uc007hxw.1_5end |
EntrezGene: | Camk2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 5.29e-17 | 17 |
cerebral cortex | 6.59e-14 | 21 |
cerebral hemisphere | 6.59e-14 | 21 |
pallium | 6.59e-14 | 21 |
Ammon's horn | 4.44e-11 | 7 |
lobe parts of cerebral cortex | 4.44e-11 | 7 |
hippocampal formation | 4.44e-11 | 7 |
limbic system | 4.44e-11 | 7 |
limbic lobe | 4.44e-11 | 7 |
brain grey matter | 2.92e-10 | 29 |
regional part of telencephalon | 2.92e-10 | 29 |
telencephalon | 2.92e-10 | 29 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
gray matter | 7.62e-09 | 34 |
occipital lobe | 7.02e-08 | 10 |
visual cortex | 7.02e-08 | 10 |
neocortex | 7.02e-08 | 10 |
regional part of forebrain | 8.71e-08 | 39 |
forebrain | 8.71e-08 | 39 |
future forebrain | 8.71e-08 | 39 |
anterior neural tube | 1.32e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.