FFCP PHASE1:Mm9::chr11:69779156..69779197,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53624|HGNC=|UniProt=Q9Z261|association_with_transcript=233bp_to_NM_016887,uc007jtb.2_5end|description=CAGE_peak_5_at_Cldn7_5end|id=chr11:69779156..69779197,+|ontology_enrichment_celltype=CL:0002563!8.34e-07!9;CL:0002251!8.34e-07!9|ontology_enrichment_celltype_v019_2=CL:0002076,1.85e-11,15;CL:0002563,7.29e-11,9;CL:0002251,7.29e-11,9;CL:0000066,1.02e-10,25;CL:0000075,6.61e-08,7;CL:0000223,8.69e-08,20;CL:0000239,6.57e-07,6;CL:0000677,6.57e-07,6;CL:0000584,6.57e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.44e-19!43;UBERON:0005409!3.93e-17!59;UBERON:0004119!3.89e-13!130;UBERON:0000925!3.89e-13!130;UBERON:0006595!3.89e-13!130;UBERON:0001007!1.00e-12!128;UBERON:0001555!1.00e-12!128;UBERON:0007026!1.00e-12!128;UBERON:0004921!1.28e-11!126;UBERON:0004185!1.28e-11!126;UBERON:0000344!2.05e-11!15;UBERON:0001242!7.39e-10!13;UBERON:0000060!7.39e-10!13;UBERON:0001262!7.39e-10!13;UBERON:0004786!7.39e-10!13;UBERON:0001008!1.79e-07!17;UBERON:0000485!2.43e-07!11;UBERON:0006554!6.22e-07!16;UBERON:0003350!8.34e-07!9;UBERON:0004808!8.34e-07!9;UBERON:0001277!8.34e-07!9;UBERON:0004923!8.35e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-30,31;UBERON:0005409,2.63e-23,47;UBERON:0000344,5.15e-19,15;UBERON:0001242,2.95e-16,13;UBERON:0001262,2.95e-16,13;UBERON:0004786,2.95e-16,13;UBERON:0001007,6.36e-14,116;UBERON:0001555,6.36e-14,116;UBERON:0007026,6.36e-14,116;UBERON:0004119,1.81e-13,118;UBERON:0000925,1.81e-13,118;UBERON:0006595,1.81e-13,118;UBERON:0004921,2.50e-12,114;UBERON:0003350,7.29e-11,9;UBERON:0004808,7.29e-11,9;UBERON:0001277,7.29e-11,9;UBERON:0000485,1.46e-10,11;UBERON:0004923,3.39e-10,24;UBERON:0002108,7.91e-07,4|phase1_expression=0.320297694209588,2.09385244583617,2.72999543633722,1.51232105653415,1.50268718983904,1.00727563147134,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,3.83981814704176,4.12936705920906,1.14846392823004,3.01533397311352,3.66301095566011,6.65081968097309,4.28451220591882,8.86922042621219,0,0,0,5.77703239502549,3.82339684324532,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,8.87613268145978,6.08063677140237,14.1546844604139,1.82694207550496,0,0,0,0,0.230615497256059,0,0,0,0.988779870937496,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,2.27450482590307,1.47309299120532,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0.431135985865684,0.567318240503458,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.32225283331772,1.06644125267617,0.464473343720877,1.41754207454303,0.605050573870028,1.33426826306922,1.71203063501303,1.42358718463353,3.29397909448022,2.26201687920243,1.79060824837036,2.33956904542944,2.69645822596266,3.02593269824572,2.38969527905241,0.948339504765408,0.685491075658373,1.1270773567308,0.814605311381257,0.775809948670503,1.47285221769669,3.03535378196435,0.738050739898011,3.29697328466887,1.97435462274881,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0,1.30371981153621,1.18821560042632,1.40814148973101,0.167506257441816,0.476087281772027,1.75620283072019,0.157635144106191,1.10732344824387,0.637819074629948,0.81931657357869,0.863424909329478,0.433947175744535,0,0,3.93411418415229,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,1.15479086080775,0,0.728341908464944,1.81394134178851,1.32023555829129,0.295301892880773,0.307435147943927,1.03371317267288,1.45413491791002,0.356497378384721,0,0,2.06271086496374,0.340439605753788,1.08036656418786,0.388076051348264,0,0.354680467284547,0.356737635204141,0.493647061806363,0,0.469343416127421,0.21183207086382,1.10264199027481,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,2.59212817972323,2.71814784818809,2.40198820120795,0.809186078308924,0.578574190077352,0,1.94422459937689,19.8828580187816,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0.483168241652012,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,2.66383144048878,0.358855426437903,1.84673078000486,1.15913756419314,0.750729901804728,1.46521299413812,1.92931541171159,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0,0.564656282491984,0.338458431566706,0,0.789209134313529,0.1358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| ||
|EntrezGene=53624 | |||
|HGNC= | |||
|UniProt=Q9Z261 | |||
|association_with_transcript=233bp_to_NM_016887,uc007jtb.2_5end | |||
|description=CAGE_peak_5_at_Cldn7_5end | |||
|id=chr11:69779156..69779197,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.34e-07!9;CL:0002251!8.34e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.85e-11,15;CL:0002563,7.29e-11,9;CL:0002251,7.29e-11,9;CL:0000066,1.02e-10,25;CL:0000075,6.61e-08,7;CL:0000223,8.69e-08,20;CL:0000239,6.57e-07,6;CL:0000677,6.57e-07,6;CL:0000584,6.57e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.44e-19!43;UBERON:0005409!3.93e-17!59;UBERON:0004119!3.89e-13!130;UBERON:0000925!3.89e-13!130;UBERON:0006595!3.89e-13!130;UBERON:0001007!1.00e-12!128;UBERON:0001555!1.00e-12!128;UBERON:0007026!1.00e-12!128;UBERON:0004921!1.28e-11!126;UBERON:0004185!1.28e-11!126;UBERON:0000344!2.05e-11!15;UBERON:0001242!7.39e-10!13;UBERON:0000060!7.39e-10!13;UBERON:0001262!7.39e-10!13;UBERON:0004786!7.39e-10!13;UBERON:0001008!1.79e-07!17;UBERON:0000485!2.43e-07!11;UBERON:0006554!6.22e-07!16;UBERON:0003350!8.34e-07!9;UBERON:0004808!8.34e-07!9;UBERON:0001277!8.34e-07!9;UBERON:0004923!8.35e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-30,31;UBERON:0005409,2.63e-23,47;UBERON:0000344,5.15e-19,15;UBERON:0001242,2.95e-16,13;UBERON:0001262,2.95e-16,13;UBERON:0004786,2.95e-16,13;UBERON:0001007,6.36e-14,116;UBERON:0001555,6.36e-14,116;UBERON:0007026,6.36e-14,116;UBERON:0004119,1.81e-13,118;UBERON:0000925,1.81e-13,118;UBERON:0006595,1.81e-13,118;UBERON:0004921,2.50e-12,114;UBERON:0003350,7.29e-11,9;UBERON:0004808,7.29e-11,9;UBERON:0001277,7.29e-11,9;UBERON:0000485,1.46e-10,11;UBERON:0004923,3.39e-10,24;UBERON:0002108,7.91e-07,4 | |||
|phase1_expression=0.320297694209588,2.09385244583617,2.72999543633722,1.51232105653415,1.50268718983904,1.00727563147134,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,3.83981814704176,4.12936705920906,1.14846392823004,3.01533397311352,3.66301095566011,6.65081968097309,4.28451220591882,8.86922042621219,0,0,0,5.77703239502549,3.82339684324532,3.47087905646027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,8.87613268145978,6.08063677140237,14.1546844604139,1.82694207550496,0,0,0,0,0.230615497256059,0,0,0,0.988779870937496,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,2.27450482590307,1.47309299120532,0.260240885925407,0,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0.431135985865684,0.567318240503458,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.32225283331772,1.06644125267617,0.464473343720877,1.41754207454303,0.605050573870028,1.33426826306922,1.71203063501303,1.42358718463353,3.29397909448022,2.26201687920243,1.79060824837036,2.33956904542944,2.69645822596266,3.02593269824572,2.38969527905241,0.948339504765408,0.685491075658373,1.1270773567308,0.814605311381257,0.775809948670503,1.47285221769669,3.03535378196435,0.738050739898011,3.29697328466887,1.97435462274881,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0,1.30371981153621,1.18821560042632,1.40814148973101,0.167506257441816,0.476087281772027,1.75620283072019,0.157635144106191,1.10732344824387,0.637819074629948,0.81931657357869,0.863424909329478,0.433947175744535,0,0,3.93411418415229,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,1.15479086080775,0,0.728341908464944,1.81394134178851,1.32023555829129,0.295301892880773,0.307435147943927,1.03371317267288,1.45413491791002,0.356497378384721,0,0,2.06271086496374,0.340439605753788,1.08036656418786,0.388076051348264,0,0.354680467284547,0.356737635204141,0.493647061806363,0,0.469343416127421,0.21183207086382,1.10264199027481,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.813277868507395,2.59212817972323,2.71814784818809,2.40198820120795,0.809186078308924,0.578574190077352,0,1.94422459937689,19.8828580187816,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0.483168241652012,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,2.66383144048878,0.358855426437903,1.84673078000486,1.15913756419314,0.750729901804728,1.46521299413812,1.92931541171159,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0,0.209613162627982,0,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.0640251524048693,0.114870937911227,0,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0,0.564656282491984,0.338458431566706,0,0.789209134313529,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p5@Cldn7 | |||
}} |
Revision as of 20:41, 12 September 2013
Short description: | p5@Cldn7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cldn7_5end |
Coexpression cluster: | NA |
Association with transcript: | 233bp_to_NM_016887, uc007jtb.2_5end |
EntrezGene: | Cldn7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.85e-11 | 15 |
intestinal epithelial cell | 7.29e-11 | 9 |
epithelial cell of alimentary canal | 7.29e-11 | 9 |
epithelial cell | 1.02e-10 | 25 |
columnar/cuboidal epithelial cell | 6.61e-08 | 7 |
endodermal cell | 8.69e-08 | 20 |
brush border epithelial cell | 6.57e-07 | 6 |
gut absorptive cell | 6.57e-07 | 6 |
enterocyte | 6.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.46e-30 | 31 |
gastrointestinal system | 2.63e-23 | 47 |
mucosa | 5.15e-19 | 15 |
intestinal mucosa | 2.95e-16 | 13 |
wall of intestine | 2.95e-16 | 13 |
gastrointestinal system mucosa | 2.95e-16 | 13 |
digestive system | 6.36e-14 | 116 |
digestive tract | 6.36e-14 | 116 |
primitive gut | 6.36e-14 | 116 |
endoderm-derived structure | 1.81e-13 | 118 |
endoderm | 1.81e-13 | 118 |
presumptive endoderm | 1.81e-13 | 118 |
subdivision of digestive tract | 2.50e-12 | 114 |
epithelium of mucosa | 7.29e-11 | 9 |
gastrointestinal system epithelium | 7.29e-11 | 9 |
intestinal epithelium | 7.29e-11 | 9 |
simple columnar epithelium | 1.46e-10 | 11 |
organ component layer | 3.39e-10 | 24 |
small intestine | 7.91e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.