FFCP PHASE1:Hg19::chr3:123518704..123518728,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7590|TSSclassifier=N|UniProt=Q06S79|association_with_transcript=306bp_to_ENST00000360367,ENST00000506361,uc010hrs.1_5end|coexpression_cluster_id=C55|description=CAGE_peak_28_at_MYLK_5end|id=chr3:123518704..123518728,-|ontology_enrichment_celltype=CL:0002620!1.74e-11!23;CL:0000057!2.01e-08!75|ontology_enrichment_celltype_v019=CL:0002622;5.00e-23;3!CL:0002600;1.14e-15;2!CL:0002620;4.80e-15;23!CL:0002580;4.88e-11;3!CL:0002615;9.33e-11;3!CL:0000182;1.75e-10;12|ontology_enrichment_celltype_v019_2=CL:0002622,2.46e-23,3;CL:0002600,7.88e-16,2;CL:0002620,5.93e-15,23;CL:0002580,6.61e-11,3;CL:0002615,1.39e-10,3;CL:0000182,1.77e-10,12;CL:0000057,4.29e-08,76|ontology_enrichment_development_v019=UBERON:0004161;6.13e-07;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;8.65e-07;5!DOID:450;8.65e-07;5!DOID:66;8.65e-07;5!DOID:423;8.65e-07;5!DOID:0080000;8.65e-07;5!DOID:11722;8.65e-07;5|ontology_enrichment_disease_v019_2=DOID:17,8.41e-07,5;DOID:450,8.41e-07,5;DOID:66,8.41e-07,5;DOID:423,8.41e-07,5;DOID:0080000,8.41e-07,5;DOID:11722,8.41e-07,5|ontology_enrichment_uberon=UBERON:0000475!3.46e-17!365;UBERON:0001049!4.24e-16!57;UBERON:0005068!4.24e-16!57;UBERON:0006241!4.24e-16!57;UBERON:0007135!4.24e-16!57;UBERON:0003075!5.69e-15!86;UBERON:0007284!5.69e-15!86;UBERON:0005743!1.15e-14!86;UBERON:0002346!7.61e-14!90;UBERON:0001017!7.07e-13!82;UBERON:0002616!9.42e-13!59;UBERON:0000073!2.47e-12!94;UBERON:0001016!2.47e-12!94;UBERON:0003076!1.92e-11!15;UBERON:0003057!1.92e-11!15;UBERON:0000955!2.39e-11!69;UBERON:0006238!2.39e-11!69;UBERON:0007023!4.31e-10!115;UBERON:0000062!1.19e-08!511;UBERON:0003056!2.40e-08!61;UBERON:0000033!2.46e-08!123;UBERON:0002780!2.99e-08!41;UBERON:0001890!2.99e-08!41;UBERON:0006240!2.99e-08!41;UBERON:0000153!4.08e-08!129;UBERON:0007811!4.08e-08!129;UBERON:0004733!4.78e-08!12;UBERON:0002028!4.78e-08!12;UBERON:0007277!4.78e-08!12;UBERON:0003080!5.99e-08!42;UBERON:0004732!2.70e-07!13;UBERON:0002298!3.06e-07!8;UBERON:0003688!3.54e-07!6;UBERON:0002358!3.54e-07!6;UBERON:0003684!3.54e-07!6;UBERON:0001178!3.54e-07!6;UBERON:0001893!5.41e-07!34;UBERON:0002097!5.88e-07!40;UBERON:0004121!6.94e-07!169|ontology_enrichment_uberon_v019=UBERON:0003688;1.34e-11;6!UBERON:0002358;1.34e-11;6!UBERON:0003684;1.34e-11;6!UBERON:0001178;1.34e-11;6!UBERON:0002367;4.87e-11;11!UBERON:0010147;4.87e-11;11!UBERON:0003937;3.93e-10;12!UBERON:0005399;3.93e-10;12!UBERON:0002336;1.09e-08;1!UBERON:0011215;1.09e-08;1!UBERON:0001018;1.09e-08;1!UBERON:0002473;1.09e-08;1!UBERON:0005340;1.09e-08;1!UBERON:0003544;1.09e-08;1!UBERON:0005970;1.09e-08;1!UBERON:0002316;1.09e-08;1!UBERON:0001020;1.09e-08;1!UBERON:0002437;1.09e-08;1!UBERON:0004457;6.76e-08;9!UBERON:0000042;6.76e-08;9!UBERON:0000310;2.84e-07;10!UBERON:0002097;5.45e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.53e-11,6;UBERON:0002358,1.53e-11,6;UBERON:0003684,1.53e-11,6;UBERON:0001178,1.53e-11,6;UBERON:0002367,4.51e-11,11;UBERON:0010147,4.51e-11,11;UBERON:0009846,4.51e-11,11;UBERON:0003353,4.51e-11,11;UBERON:0004902,4.51e-11,11;UBERON:0003820,4.51e-11,11;UBERON:0009847,4.51e-11,11;UBERON:0003937,3.67e-10,12;UBERON:0005399,3.67e-10,12;UBERON:0002336,9.02e-09,1;UBERON:0011215,9.02e-09,1;UBERON:0001018,9.02e-09,1;UBERON:0002473,9.02e-09,1;UBERON:0005340,9.02e-09,1;UBERON:0003544,9.02e-09,1;UBERON:0005970,9.02e-09,1;UBERON:0002316,9.02e-09,1;UBERON:0001020,9.02e-09,1;UBERON:0002437,9.02e-09,1;UBERON:0000162,9.94e-09,14;UBERON:0001353,9.94e-09,14;UBERON:0000163,9.94e-09,14;UBERON:0006866,9.94e-09,14;UBERON:0000164,9.94e-09,14;UBERON:0000931,9.94e-09,14;UBERON:0004122,3.73e-08,15;UBERON:0002097,4.85e-08,41;UBERON:0003929,7.13e-08,54;UBERON:0009569,1.82e-07,112;UBERON:0000310,2.75e-07,10;UBERON:0003102,3.75e-07,99;UBERON:0002530,4.11e-07,59;UBERON:0002199,4.43e-07,46;UBERON:0002416,4.43e-07,46|phase1_expression=0,1.92690471501885,0,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.975865597581014,0.246242116153576,0.612002073732759,1.25381888591235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15877215168659,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,1.4351170855109,0.427114777637135,0,1.20036438433761,0.206105058476878,2.83404594050192,1.67505170698431,1.0126579934476,0.389748020644795,2.77677151668526,0.920498986422993,0.161646056818812,1.06502877754984,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7590 | |||
|TSSclassifier=N | |||
|UniProt=Q06S79 | |||
|association_with_transcript=306bp_to_ENST00000360367,ENST00000506361,uc010hrs.1_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_28_at_MYLK_5end | |||
|id=chr3:123518704..123518728,- | |||
|ontology_enrichment_celltype=CL:0002620!1.74e-11!23;CL:0000057!2.01e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002622;5.00e-23;3!CL:0002600;1.14e-15;2!CL:0002620;4.80e-15;23!CL:0002580;4.88e-11;3!CL:0002615;9.33e-11;3!CL:0000182;1.75e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,2.46e-23,3;CL:0002600,7.88e-16,2;CL:0002620,5.93e-15,23;CL:0002580,6.61e-11,3;CL:0002615,1.39e-10,3;CL:0000182,1.77e-10,12;CL:0000057,4.29e-08,76 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.13e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.65e-07;5!DOID:450;8.65e-07;5!DOID:66;8.65e-07;5!DOID:423;8.65e-07;5!DOID:0080000;8.65e-07;5!DOID:11722;8.65e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.41e-07,5;DOID:450,8.41e-07,5;DOID:66,8.41e-07,5;DOID:423,8.41e-07,5;DOID:0080000,8.41e-07,5;DOID:11722,8.41e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.46e-17!365;UBERON:0001049!4.24e-16!57;UBERON:0005068!4.24e-16!57;UBERON:0006241!4.24e-16!57;UBERON:0007135!4.24e-16!57;UBERON:0003075!5.69e-15!86;UBERON:0007284!5.69e-15!86;UBERON:0005743!1.15e-14!86;UBERON:0002346!7.61e-14!90;UBERON:0001017!7.07e-13!82;UBERON:0002616!9.42e-13!59;UBERON:0000073!2.47e-12!94;UBERON:0001016!2.47e-12!94;UBERON:0003076!1.92e-11!15;UBERON:0003057!1.92e-11!15;UBERON:0000955!2.39e-11!69;UBERON:0006238!2.39e-11!69;UBERON:0007023!4.31e-10!115;UBERON:0000062!1.19e-08!511;UBERON:0003056!2.40e-08!61;UBERON:0000033!2.46e-08!123;UBERON:0002780!2.99e-08!41;UBERON:0001890!2.99e-08!41;UBERON:0006240!2.99e-08!41;UBERON:0000153!4.08e-08!129;UBERON:0007811!4.08e-08!129;UBERON:0004733!4.78e-08!12;UBERON:0002028!4.78e-08!12;UBERON:0007277!4.78e-08!12;UBERON:0003080!5.99e-08!42;UBERON:0004732!2.70e-07!13;UBERON:0002298!3.06e-07!8;UBERON:0003688!3.54e-07!6;UBERON:0002358!3.54e-07!6;UBERON:0003684!3.54e-07!6;UBERON:0001178!3.54e-07!6;UBERON:0001893!5.41e-07!34;UBERON:0002097!5.88e-07!40;UBERON:0004121!6.94e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.34e-11;6!UBERON:0002358;1.34e-11;6!UBERON:0003684;1.34e-11;6!UBERON:0001178;1.34e-11;6!UBERON:0002367;4.87e-11;11!UBERON:0010147;4.87e-11;11!UBERON:0003937;3.93e-10;12!UBERON:0005399;3.93e-10;12!UBERON:0002336;1.09e-08;1!UBERON:0011215;1.09e-08;1!UBERON:0001018;1.09e-08;1!UBERON:0002473;1.09e-08;1!UBERON:0005340;1.09e-08;1!UBERON:0003544;1.09e-08;1!UBERON:0005970;1.09e-08;1!UBERON:0002316;1.09e-08;1!UBERON:0001020;1.09e-08;1!UBERON:0002437;1.09e-08;1!UBERON:0004457;6.76e-08;9!UBERON:0000042;6.76e-08;9!UBERON:0000310;2.84e-07;10!UBERON:0002097;5.45e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.53e-11,6;UBERON:0002358,1.53e-11,6;UBERON:0003684,1.53e-11,6;UBERON:0001178,1.53e-11,6;UBERON:0002367,4.51e-11,11;UBERON:0010147,4.51e-11,11;UBERON:0009846,4.51e-11,11;UBERON:0003353,4.51e-11,11;UBERON:0004902,4.51e-11,11;UBERON:0003820,4.51e-11,11;UBERON:0009847,4.51e-11,11;UBERON:0003937,3.67e-10,12;UBERON:0005399,3.67e-10,12;UBERON:0002336,9.02e-09,1;UBERON:0011215,9.02e-09,1;UBERON:0001018,9.02e-09,1;UBERON:0002473,9.02e-09,1;UBERON:0005340,9.02e-09,1;UBERON:0003544,9.02e-09,1;UBERON:0005970,9.02e-09,1;UBERON:0002316,9.02e-09,1;UBERON:0001020,9.02e-09,1;UBERON:0002437,9.02e-09,1;UBERON:0000162,9.94e-09,14;UBERON:0001353,9.94e-09,14;UBERON:0000163,9.94e-09,14;UBERON:0006866,9.94e-09,14;UBERON:0000164,9.94e-09,14;UBERON:0000931,9.94e-09,14;UBERON:0004122,3.73e-08,15;UBERON:0002097,4.85e-08,41;UBERON:0003929,7.13e-08,54;UBERON:0009569,1.82e-07,112;UBERON:0000310,2.75e-07,10;UBERON:0003102,3.75e-07,99;UBERON:0002530,4.11e-07,59;UBERON:0002199,4.43e-07,46;UBERON:0002416,4.43e-07,46 | |||
|phase1_expression=0,1.92690471501885,0,1.0007329835313,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.975865597581014,0.246242116153576,0.612002073732759,1.25381888591235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15877215168659,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,1.4351170855109,0.427114777637135,0,1.20036438433761,0.206105058476878,2.83404594050192,1.67505170698431,1.0126579934476,0.389748020644795,2.77677151668526,0.920498986422993,0.161646056818812,1.06502877754984,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,3.06923946576125,1.12264037773229,0.128139149255701,1.53512174720011,0.482561763430822,0,0,0,0,0,0,0,0,0,1.95184561879831,1.27463817604702,3.67148361886388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,1.09199929126389,0,0,0,0,0,1.15755106853338,1.9676842561399,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34802265961354,0,0.702793337176017,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,5.51482276150566,6.67568452887448,5.12266933291805,0.0984274815147488,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.121499113316049,0,0.472834243795189,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.387848869084652,0,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.554645257684261,0.993542447062135,0,0.124980407962107,0,0,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0.889811221596536,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0.71635536432595,0,0,0.176689145945881,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.615349092722265,0,0.622415272177961,0.322951291263702,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,1.90315252335129,0.197318320688547,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p28@MYLK | |||
}} |
Revision as of 21:13, 12 September 2013
Short description: | p28@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_MYLK_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 306bp_to_ENST00000360367, ENST00000506361, uc010hrs.1_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | Q06S79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 2.46e-23 | 3 |
smooth muscle cell of trachea | 7.88e-16 | 2 |
skin fibroblast | 5.93e-15 | 23 |
preadipocyte of the breast | 6.61e-11 | 3 |
adipocyte of omentum tissue | 1.39e-10 | 3 |
hepatocyte | 1.77e-10 | 12 |
fibroblast | 4.29e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.41e-07 | 5 |
myotonic disease | 8.41e-07 | 5 |
muscle tissue disease | 8.41e-07 | 5 |
myopathy | 8.41e-07 | 5 |
muscular disease | 8.41e-07 | 5 |
myotonic dystrophy | 8.41e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.