CL:0002600
From FANTOM5_SSTAR
Name: | smooth muscle cell of trachea |
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Namespace: | FANTOM |
Definition: | "A smooth muscle cell of the trachea." [GOC:tfm] |
Created by: | tmeehan |
Creation date: | 2011-03-06T05:50:28Z |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000192(smooth muscle cell) |
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part_of: | UBERON:0003126(trachea) |
Children
derives from: | FF:0000184 (human smooth muscle cell of trachea sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11513-119H1 (Smooth Muscle Cells - Tracheal, donor1)
- 11593-120G9 (Smooth Muscle Cells - Tracheal, donor2)
- 11674-122G9 (Smooth Muscle Cells - Tracheal, donor3)
Mouse (Mus musculus)
- 11513-119H1 (Smooth Muscle Cells - Tracheal, donor1)
- 11593-120G9 (Smooth Muscle Cells - Tracheal, donor2)
- 11674-122G9 (Smooth Muscle Cells - Tracheal, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002600 (smooth muscle cell of trachea), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
8.99e-131 | FFCP PHASE2:Hg19::chr8:77108050..77108053,-#_41f366cc575253a2df47328395954efc | p@chr8:77108050..77108053, - |
8.99e-131 | FFCP PHASE1:Hg19::chr8:77108050..77108053,-#_41f366cc575253a2df47328395954efc | p@chr8:77108050..77108053, - |
8.99e-131 | FFCP PHASE1:Hg19::chr4:139481823..139481855,+#_41f366cc575253a2df47328395954efc | p5@ENST00000502915 |
8.99e-131 | FFCP PHASE2:Hg19::chr4:139481823..139481855,+#_41f366cc575253a2df47328395954efc | p5@ENST00000502915 |
4.52e-50 | FFCP PHASE1:Hg19::chr6:55739493..55739502,-#_ef0be3602612e47ef392ef4e16e1b056 | p6@AB527577, p6@CU693346 |
4.52e-50 | FFCP PHASE1:Hg19::chr2:128224913..128224918,+#_ef0be3602612e47ef392ef4e16e1b056 | p1@ENST00000454503 |
4.52e-50 | FFCP PHASE2:Hg19::chr6:55739493..55739502,-#_ef0be3602612e47ef392ef4e16e1b056 | p6@AB527577, p6@CU693346 |
4.52e-50 | FFCP PHASE2:Hg19::chr2:128224913..128224918,+#_ef0be3602612e47ef392ef4e16e1b056 | p1@ENST00000454503 |
1.57e-37 | FFCP PHASE2:Hg19::chr19:34787674..34787690,-#_847a02b0cd48de095a958317098e483f | p1@ENST00000431093 |
1.57e-37 | FFCP PHASE1:Hg19::chr19:34787674..34787690,-#_847a02b0cd48de095a958317098e483f | p1@ENST00000431093 |
4.29e-34 | FFCP PHASE1:Hg19::chr17:59479934..59479943,+#_43f1b715caa9a4a21cb8b9b56a68284f | p@chr17:59479934..59479943, + |
4.29e-34 | FFCP PHASE2:Hg19::chr17:59479934..59479943,+#_43f1b715caa9a4a21cb8b9b56a68284f | p@chr17:59479934..59479943, + |
5.04e-34 | FFCP PHASE1:Hg19::chr6:134070066..134070077,+#_760e93aaabf85551c7baac4311ed9a89 | p@chr6:134070066..134070077, + |
5.04e-34 | FFCP PHASE2:Hg19::chr6:134070066..134070077,+#_760e93aaabf85551c7baac4311ed9a89 | p@chr6:134070066..134070077, + |
7.05e-34 | FFCP PHASE1:Hg19::chr8:43046621..43046633,+#_afd8f00d6e5c886fd2da7c60b799d606 | p@chr8:43046621..43046633, + |
7.05e-34 | FFCP PHASE2:Hg19::chr21:46790685..46790698,+#_afd8f00d6e5c886fd2da7c60b799d606 | p@chr21:46790685..46790698, + |
7.05e-34 | FFCP PHASE2:Hg19::chr17:79966642..79966666,+#_afd8f00d6e5c886fd2da7c60b799d606 | p@chr17:79966642..79966666, + |
7.05e-34 | FFCP PHASE1:Hg19::chr17:15686350..15686359,+#_afd8f00d6e5c886fd2da7c60b799d606 | p4@IL6STP1 |
7.05e-34 | FFCP PHASE1:Hg19::chr21:46790685..46790698,+#_afd8f00d6e5c886fd2da7c60b799d606 | p@chr21:46790685..46790698, + |
7.05e-34 | FFCP PHASE1:Hg19::chr16:86612092..86612099,+#_afd8f00d6e5c886fd2da7c60b799d606 | p6@FOXL1 |
7.05e-34 | FFCP PHASE1:Hg19::chr17:79966642..79966666,+#_afd8f00d6e5c886fd2da7c60b799d606 | p@chr17:79966642..79966666, + |
7.05e-34 | FFCP PHASE2:Hg19::chr16:86612092..86612099,+#_afd8f00d6e5c886fd2da7c60b799d606 | p6@FOXL1 |
7.05e-34 | FFCP PHASE2:Hg19::chr17:15686350..15686359,+#_afd8f00d6e5c886fd2da7c60b799d606 | p4@IL6STP1 |
7.05e-34 | FFCP PHASE2:Hg19::chr8:43046621..43046633,+#_afd8f00d6e5c886fd2da7c60b799d606 | +, p@chr8:43046621..43046633 |
1.6e-27 | FFCP PHASE1:Hg19::chr17:74533899..74533909,+#_2839ec616b301dc4bb56e9d08c84565e | p5@PRCD |
1.6e-27 | FFCP PHASE2:Hg19::chr17:74533899..74533909,+#_2839ec616b301dc4bb56e9d08c84565e | p5@PRCD |
7.14e-26 | FFCP PHASE2:Hg19::chr6:55739305..55739315,-#_8edd30b81c309bad51b27d762c0435f3 | p4@AB527577, p4@CU693346 |
7.14e-26 | FFCP PHASE1:Hg19::chr2:187615989..187616000,+#_8edd30b81c309bad51b27d762c0435f3 | p@chr2:187615989..187616000, + |
7.14e-26 | FFCP PHASE2:Hg19::chr2:187615989..187616000,+#_8edd30b81c309bad51b27d762c0435f3 | p@chr2:187615989..187616000, + |
7.14e-26 | FFCP PHASE1:Hg19::chr18:12977031..12977043,+#_8edd30b81c309bad51b27d762c0435f3 | p@chr18:12977031..12977043, + |
7.14e-26 | FFCP PHASE2:Hg19::chr18:12977031..12977043,+#_8edd30b81c309bad51b27d762c0435f3 | p@chr18:12977031..12977043, + |
7.14e-26 | FFCP PHASE1:Hg19::chr6:55739305..55739315,-#_8edd30b81c309bad51b27d762c0435f3 | p4@AB527577, p4@CU693346 |
7.14e-26 | FFCP PHASE1:Hg19::chr18:47087390..47087399,+#_8edd30b81c309bad51b27d762c0435f3 | p7@LIPG |
7.14e-26 | FFCP PHASE2:Hg19::chr18:47087390..47087399,+#_8edd30b81c309bad51b27d762c0435f3 | p7@LIPG |
9.18e-26 | FFCP PHASE2:Hg19::chr8:20125747..20125758,-#_3d9199359728aa7459aea32394c9551f | p@chr8:20125747..20125758, - |
9.18e-26 | FFCP PHASE1:Hg19::chr8:20125747..20125758,-#_3d9199359728aa7459aea32394c9551f | p@chr8:20125747..20125758, - |
1.85e-25 | FFCP PHASE1:Hg19::chr8:128387795..128387801,+#_ff77ad39159ad96b6ec6ca4c5d6c17e8 | +, p@chr8:128387795..128387801 |
1.85e-25 | FFCP PHASE2:Hg19::chr8:128387795..128387801,+#_ff77ad39159ad96b6ec6ca4c5d6c17e8 | p@chr8:128387795..128387801, + |
1.7e-21 | FFCP PHASE2:Hg19::chr17:29335535..29335575,-#_120750d26785f00279599eff6d6d299c | p@chr17:29335535..29335575, - |
1.7e-21 | FFCP PHASE1:Hg19::chr17:29335535..29335575,-#_120750d26785f00279599eff6d6d299c | p@chr17:29335535..29335575, - |
2.31e-21 | FFCP PHASE2:Hg19::chr17:46671154..46671167,-#_e48f345788ced93b0550a269c6294cf5 | p4@HOXB5 |
2.31e-21 | FFCP PHASE1:Hg19::chr17:46671154..46671167,-#_e48f345788ced93b0550a269c6294cf5 | p4@HOXB5 |
4.66e-21 | FFCP PHASE2:Hg19::chr14:105297526..105297531,-#_c43c4ab41dbaea3a319948304f6627a7 | p1@RPS26P49 |
4.66e-21 | FFCP PHASE2:Hg19::chr8:16613036..16613043,-#_c43c4ab41dbaea3a319948304f6627a7 | p@chr8:16613036..16613043, - |
4.66e-21 | FFCP PHASE1:Hg19::chr8:16613036..16613043,-#_c43c4ab41dbaea3a319948304f6627a7 | p@chr8:16613036..16613043, - |
4.66e-21 | FFCP PHASE1:Hg19::chr14:105297526..105297531,-#_c43c4ab41dbaea3a319948304f6627a7 | p1@RPS26P49 |
6.96e-21 | FFCP PHASE1:Hg19::chr11:299519..299533,-#_5f5d923ca7425ae47224fc4737579fb1 | p1@IFITM5 |
6.96e-21 | FFCP PHASE2:Hg19::chr11:299519..299533,-#_5f5d923ca7425ae47224fc4737579fb1 | p1@IFITM5 |
1.29e-20 | FFCP PHASE2:Hg19::chr5:141703713..141703724,-#_85261c69134d4c27e5b99c490065c7a3 | p9@SPRY4 |
1.29e-20 | FFCP PHASE1:Hg19::chr5:141703713..141703724,-#_85261c69134d4c27e5b99c490065c7a3 | p9@SPRY4 |
7.2e-20 | FFCP PHASE2:Hg19::chr19:11306638..11306657,-#_499b55fb3898b5391f657fb8ade6e922 | p13@KANK2 |
7.2e-20 | FFCP PHASE1:Hg19::chr19:11306638..11306657,-#_499b55fb3898b5391f657fb8ade6e922 | p13@KANK2 |
2.17e-19 | FFCP PHASE1:Hg19::chr1:17914878..17914890,+#_a83609f84683e27eeb37c03fcbd22024 | p12@ARHGEF10L |
2.17e-19 | FFCP PHASE2:Hg19::chr1:17914878..17914890,+#_a83609f84683e27eeb37c03fcbd22024 | p12@ARHGEF10L |
7.67e-18 | FFCP PHASE2:Hg19::chr17:65440428..65440449,-#_3e4d9df63bf75f2c1f0e34c216c4bed2 | p@chr17:65440428..65440449, - |
7.67e-18 | FFCP PHASE1:Hg19::chr17:65440428..65440449,-#_3e4d9df63bf75f2c1f0e34c216c4bed2 | p@chr17:65440428..65440449, - |
9.07e-18 | FFCP PHASE1:Hg19::chr9:73028424..73028427,-#_594f1bafb998fbf4c896128931c12b02 | p18@KLF9 |
9.07e-18 | FFCP PHASE2:Hg19::chr9:73028424..73028427,-#_594f1bafb998fbf4c896128931c12b02 | p18@KLF9 |
1.07e-17 | FFCP PHASE1:Hg19::chr4:100304021..100304034,-#_2308833b97536750cd34ad085e546d55 | p@chr4:100304021..100304034, - |
1.07e-17 | FFCP PHASE1:Hg19::chr1:9302789..9302798,+#_2308833b97536750cd34ad085e546d55 | +, p@chr1:9302789..9302798 |
1.07e-17 | FFCP PHASE2:Hg19::chr1:9302789..9302798,+#_2308833b97536750cd34ad085e546d55 | p@chr1:9302789..9302798, + |
1.07e-17 | FFCP PHASE2:Hg19::chr22:29965263..29965274,-#_2308833b97536750cd34ad085e546d55 | p@chr22:29965263..29965274, - |
1.07e-17 | FFCP PHASE2:Hg19::chr4:100304021..100304034,-#_2308833b97536750cd34ad085e546d55 | p@chr4:100304021..100304034, - |
1.07e-17 | FFCP PHASE1:Hg19::chr22:29965263..29965274,-#_2308833b97536750cd34ad085e546d55 | p@chr22:29965263..29965274, - |
1.07e-17 | FFCP PHASE2:Hg19::chr3:141105560..141105572,-#_2308833b97536750cd34ad085e546d55 | p@chr3:141105560..141105572, - |
1.07e-17 | FFCP PHASE2:Hg19::chr14:76447494..76447508,-#_2308833b97536750cd34ad085e546d55 | p16@TGFB3 |
1.07e-17 | FFCP PHASE1:Hg19::chr14:76447494..76447508,-#_2308833b97536750cd34ad085e546d55 | p16@TGFB3 |
1.07e-17 | FFCP PHASE1:Hg19::chr3:141105560..141105572,-#_2308833b97536750cd34ad085e546d55 | p@chr3:141105560..141105572, - |
1.27e-17 | FFCP PHASE2:Hg19::chr20:43589109..43589118,-#_eabe3cb94adef0eaafc888e96e43415c | p2@TOMM34 |
1.27e-17 | FFCP PHASE1:Hg19::chr20:43589109..43589118,-#_eabe3cb94adef0eaafc888e96e43415c | p2@TOMM34 |
1.27e-17 | FFCP PHASE1:Hg19::chrY:58884631..58884640,+#_eabe3cb94adef0eaafc888e96e43415c | p@chrY:58884631..58884640, + |
1.27e-17 | FFCP PHASE2:Hg19::chrY:58884631..58884640,+#_eabe3cb94adef0eaafc888e96e43415c | p@chrY:58884631..58884640, + |
1.37e-16 | FFCP PHASE1:Hg19::chr9:73094859..73094866,-#_09e5f5c0a154d896a23e0a6468fabf4d | p@chr9:73094859..73094866, - |
1.37e-16 | FFCP PHASE2:Hg19::chr9:73094859..73094866,-#_09e5f5c0a154d896a23e0a6468fabf4d | p@chr9:73094859..73094866, - |
2.19e-16 | FFCP PHASE2:Hg19::chr7:27183156..27183167,-#_2b612a0e8e86d6a1ed0a9799ff07faa5 | p8@HOXA5 |
2.19e-16 | FFCP PHASE1:Hg19::chr7:27183156..27183167,-#_2b612a0e8e86d6a1ed0a9799ff07faa5 | p8@HOXA5 |
2.56e-16 | FFCP PHASE1:Hg19::chr12:56389796..56389800,+#_c1a06b1d10d4ceb470cef2eac9da4407 | p@chr12:56389796..56389800, + |
2.56e-16 | FFCP PHASE2:Hg19::chr12:56389796..56389800,+#_c1a06b1d10d4ceb470cef2eac9da4407 | p@chr12:56389796..56389800, + |
4.65e-16 | FFCP PHASE1:Hg19::chr4:1161154..1161170,-#_51d35a8a349eced10f93a90dc4952554 | p@chr4:1161154..1161170, - |
4.65e-16 | FFCP PHASE2:Hg19::chr4:1161154..1161170,-#_51d35a8a349eced10f93a90dc4952554 | p@chr4:1161154..1161170, - |
5.02e-16 | FFCP PHASE2:Hg19::chr17:46670845..46670856,-#_4673425266fb45700938394efc38d847 | p8@AB464575 |
5.02e-16 | FFCP PHASE1:Hg19::chr17:46670845..46670856,-#_4673425266fb45700938394efc38d847 | p8@AB464575 |
5.41e-16 | FFCP PHASE2:Hg19::chr11:101918136..101918145,+#_71770ba81b3742b10568923ba2bf6323 | p2@C11orf70 |
5.41e-16 | FFCP PHASE1:Hg19::chr11:101918136..101918145,+#_71770ba81b3742b10568923ba2bf6323 | p2@C11orf70 |
7.88e-16 | FFCP PHASE2:Hg19::chr3:123518704..123518728,-#_3f222d24dcb4a2295b7a6c7f1c73b090 | p28@MYLK |
7.88e-16 | FFCP PHASE1:Hg19::chr3:123518704..123518728,-#_3f222d24dcb4a2295b7a6c7f1c73b090 | p28@MYLK |
2.05e-15 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_6c547a384531e4f380855108d1c80c7d | p@chr10:81923378..81923389, - |
2.05e-15 | FFCP PHASE1:Hg19::chr19:11546153..11546168,+#_6c547a384531e4f380855108d1c80c7d | p16@PRKCSH |
2.05e-15 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_6c547a384531e4f380855108d1c80c7d | p@chr10:81923378..81923389, - |
2.05e-15 | FFCP PHASE2:Hg19::chr19:11546153..11546168,+#_6c547a384531e4f380855108d1c80c7d | p16@PRKCSH |
2.37e-15 | FFCP PHASE2:Hg19::chr10:92178805..92178827,+#_034573813c4f3b8e01f7678eb761b577 | p@chr10:92178805..92178827, + |
2.37e-15 | FFCP PHASE1:Hg19::chr10:92178805..92178827,+#_034573813c4f3b8e01f7678eb761b577 | p@chr10:92178805..92178827, + |
2.37e-15 | FFCP PHASE2:Hg19::chr17:42164091..42164102,-#_034573813c4f3b8e01f7678eb761b577 | p@chr17:42164091..42164102, - |
2.37e-15 | FFCP PHASE1:Hg19::chr17:42164091..42164102,-#_034573813c4f3b8e01f7678eb761b577 | p@chr17:42164091..42164102, - |
2.74e-15 | FFCP PHASE2:Hg19::chr7:25400379..25400385,+#_0d8ec0a014e79973fd12ebd44b5ff582 | p@chr7:25400379..25400385, + |
2.74e-15 | FFCP PHASE1:Hg19::chr7:25400379..25400385,+#_0d8ec0a014e79973fd12ebd44b5ff582 | p@chr7:25400379..25400385, + |
4.8e-15 | FFCP PHASE2:Hg19::chr7:27154961..27154973,+#_484329547b6f65b5d88103316502a071 | p1@ENST00000517635 |
4.8e-15 | FFCP PHASE1:Hg19::chr7:27154961..27154973,+#_484329547b6f65b5d88103316502a071 | p1@ENST00000517635 |
4.95e-15 | FFCP PHASE2:Hg19::chr12:7260968..7260978,-#_f5578181f114d85c94f0bf7e388266c7 | p5@C1RL |
4.95e-15 | FFCP PHASE1:Hg19::chr12:7260968..7260978,-#_f5578181f114d85c94f0bf7e388266c7 | p5@C1RL |