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FFCP PHASE1:Mm9::chr11:86400541..86400552,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=75909|HGNC=|UniProt=|association_with_transcript=-45bp_to_ENSMUST00000145846_5end|description=CAGE_peak_8_at_Vmp1_5end|id=chr11:86400541..86400552,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000223,4.74e-07,20;CL:0000066,6.83e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!8.73e-11!128;UBERON:0001555!8.73e-11!128;UBERON:0007026!8.73e-11!128;UBERON:0004119!3.05e-10!130;UBERON:0000925!3.05e-10!130;UBERON:0006595!3.05e-10!130;UBERON:0004921!4.00e-10!126;UBERON:0004185!4.00e-10!126;UBERON:0005256!8.84e-09!47;UBERON:0003914!2.65e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.05e-09,116;UBERON:0001555,2.05e-09,116;UBERON:0007026,2.05e-09,116;UBERON:0003914,2.70e-09,47;UBERON:0004119,6.04e-09,118;UBERON:0000925,6.04e-09,118;UBERON:0006595,6.04e-09,118;UBERON:0004921,1.14e-08,114;UBERON:0005256,1.78e-08,45;UBERON:0009854,1.02e-07,23;UBERON:0009856,1.02e-07,23;UBERON:0000344,1.72e-07,15;UBERON:0005409,1.92e-07,47;UBERON:0002107,3.10e-07,22;UBERON:0007499,3.10e-07,22;UBERON:0006925,3.10e-07,22;UBERON:0009497,3.10e-07,22;UBERON:0000015,3.10e-07,22;UBERON:0002423,3.10e-07,22;UBERON:0006235,3.10e-07,22;UBERON:0008835,3.10e-07,22;UBERON:0003894,3.10e-07,22;UBERON:0004161,3.10e-07,22;UBERON:0008836,3.10e-07,22;UBERON:0000490,6.30e-07,66;UBERON:0000160,9.34e-07,31|phase1_expression=0.480446541314382,0.348975407639361,1.81999695755814,2.11724947914781,2.50447864973174,1.34303417529512,1.16806320297763,0.645616617207881,0.563154888606667,0,1.02730780935303,0.398860794976682,0.342401459862411,0.0874204024189974,0.333109761815663,0,2.09868563438444,0.315462165358238,0.685572168028694,1.69755860719212,0.850432901510698,0.695036658406197,0.261199789138935,1.27993938234725,2.98232065387321,0.57423196411502,1.29228598847722,1.50829862880122,2.09025761402011,1.51218077855958,1.99557459589774,0.635030673459631,0.61506478758457,0,3.75507105676657,1.66234645358492,3.47087905646027,1.25559489221072,1.5626706890476,0.523523743973798,1.76469446409304,2.04913645487534,0.485510353031154,8.93867407626599,8.51566222243922,4.03802854755699,5.47673941043627,1.96222640742402,1.09843091367236,2.3331587888914,1.67983705950435,1.43752564364972,0,0,0,1.02903774414379,2.86533439938757,1.03134418455488,0,0,0,2.37191172448392,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,2.69640099466564,2.30530983192933,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.453429360640713,1.44932244350839,1.72084775396277,2.719885334831,3.2382191498269,1.94932925234301,3.58421509677868,1.26399978118577,1.1930122580464,1.29893002301434,1.06001872353102,1.54927761754349,2.56652954828636,0,0,1.29894624606728,1.52015919285059,0.505524445014783,2.62622923353838,3.6251303710604,0.445326417194474,0.173485326766136,0.304465478312141,0.922461989024234,0.753613202763113,0.705532242814229,0.251333182659351,0.494389935468748,0.86759614151947,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0,0,2.55457055208591,1.43778149407104,2.39961092397363,0.635351135365324,0,0,0,0,0,0,0,1.2220723662038,2.11491850037158,3.79084137650512,0.210441855886474,0.130120442962704,0.229902104433473,0.540186389416048,0.30140963567143,0.340182495756639,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,2.1066395619397,0,0.284163499395593,2.69263504296152,2.34526059981096,1.2604344302271,1.18372367792605,1.57411385397923,0.617068451549513,1.62773761325285,0.804820204198858,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,0.420579897128254,0.102904612379284,1.32167513193519,1.85115396664481,1.06644125267617,3.25131340604614,1.15980715189884,1.21010114774006,1.11189021922435,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,0.58489226135736,2.69645822596266,1.51296634912286,1.1948476395262,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.420814919341911,0.316182685621286,0.295220295959204,1.255989822731,0.493588655687202,4.15033677922008,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0.964708639009667,2.29163266603278,1.15078454980324,3.08056930872567,1.92192989231657,1.43768206527355,1.11642284300551,1.5601883655728,2.02063102357689,4.84373016509163,4.82443521363367,0.739012760666419,0.757965647081939,0.325929952884052,0.509235257325564,0.469380496577004,0.837531287209079,1.6663054862021,0.975668239288994,2.52216230569906,1.10732344824387,1.43509291791738,1.3109065177259,2.41758974612254,1.01254341007058,4.52373851817817,1.08781136763742,0,0,0,0,0,0.252470927204373,0.315508219416257,1.17131623288992,0.430846795465598,0.716906393857656,1.78238939265915,1.98153571552183,0.404810701674894,0.584511715822624,0.395287777946524,0,1.84522110770749,0.712262414669021,1.62886959353576,3.6293427053957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|EntrezGene=75909
|HGNC=
|UniProt=
|association_with_transcript=-45bp_to_ENSMUST00000145846_5end
|description=CAGE_peak_8_at_Vmp1_5end
|id=chr11:86400541..86400552,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000223,4.74e-07,20;CL:0000066,6.83e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!8.73e-11!128;UBERON:0001555!8.73e-11!128;UBERON:0007026!8.73e-11!128;UBERON:0004119!3.05e-10!130;UBERON:0000925!3.05e-10!130;UBERON:0006595!3.05e-10!130;UBERON:0004921!4.00e-10!126;UBERON:0004185!4.00e-10!126;UBERON:0005256!8.84e-09!47;UBERON:0003914!2.65e-08!47
|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.05e-09,116;UBERON:0001555,2.05e-09,116;UBERON:0007026,2.05e-09,116;UBERON:0003914,2.70e-09,47;UBERON:0004119,6.04e-09,118;UBERON:0000925,6.04e-09,118;UBERON:0006595,6.04e-09,118;UBERON:0004921,1.14e-08,114;UBERON:0005256,1.78e-08,45;UBERON:0009854,1.02e-07,23;UBERON:0009856,1.02e-07,23;UBERON:0000344,1.72e-07,15;UBERON:0005409,1.92e-07,47;UBERON:0002107,3.10e-07,22;UBERON:0007499,3.10e-07,22;UBERON:0006925,3.10e-07,22;UBERON:0009497,3.10e-07,22;UBERON:0000015,3.10e-07,22;UBERON:0002423,3.10e-07,22;UBERON:0006235,3.10e-07,22;UBERON:0008835,3.10e-07,22;UBERON:0003894,3.10e-07,22;UBERON:0004161,3.10e-07,22;UBERON:0008836,3.10e-07,22;UBERON:0000490,6.30e-07,66;UBERON:0000160,9.34e-07,31
|phase1_expression=0.480446541314382,0.348975407639361,1.81999695755814,2.11724947914781,2.50447864973174,1.34303417529512,1.16806320297763,0.645616617207881,0.563154888606667,0,1.02730780935303,0.398860794976682,0.342401459862411,0.0874204024189974,0.333109761815663,0,2.09868563438444,0.315462165358238,0.685572168028694,1.69755860719212,0.850432901510698,0.695036658406197,0.261199789138935,1.27993938234725,2.98232065387321,0.57423196411502,1.29228598847722,1.50829862880122,2.09025761402011,1.51218077855958,1.99557459589774,0.635030673459631,0.61506478758457,0,3.75507105676657,1.66234645358492,3.47087905646027,1.25559489221072,1.5626706890476,0.523523743973798,1.76469446409304,2.04913645487534,0.485510353031154,8.93867407626599,8.51566222243922,4.03802854755699,5.47673941043627,1.96222640742402,1.09843091367236,2.3331587888914,1.67983705950435,1.43752564364972,0,0,0,1.02903774414379,2.86533439938757,1.03134418455488,0,0,0,2.37191172448392,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,2.69640099466564,2.30530983192933,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.453429360640713,1.44932244350839,1.72084775396277,2.719885334831,3.2382191498269,1.94932925234301,3.58421509677868,1.26399978118577,1.1930122580464,1.29893002301434,1.06001872353102,1.54927761754349,2.56652954828636,0,0,1.29894624606728,1.52015919285059,0.505524445014783,2.62622923353838,3.6251303710604,0.445326417194474,0.173485326766136,0.304465478312141,0.922461989024234,0.753613202763113,0.705532242814229,0.251333182659351,0.494389935468748,0.86759614151947,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0,0,2.55457055208591,1.43778149407104,2.39961092397363,0.635351135365324,0,0,0,0,0,0,0,1.2220723662038,2.11491850037158,3.79084137650512,0.210441855886474,0.130120442962704,0.229902104433473,0.540186389416048,0.30140963567143,0.340182495756639,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0.59710280045548,2.1066395619397,0,0.284163499395593,2.69263504296152,2.34526059981096,1.2604344302271,1.18372367792605,1.57411385397923,0.617068451549513,1.62773761325285,0.804820204198858,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,0.420579897128254,0.102904612379284,1.32167513193519,1.85115396664481,1.06644125267617,3.25131340604614,1.15980715189884,1.21010114774006,1.11189021922435,0.570676878337677,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,0.58489226135736,2.69645822596266,1.51296634912286,1.1948476395262,0.189667900953082,0.456994050438915,0,0.203651327845314,0,0.420814919341911,0.316182685621286,0.295220295959204,1.255989822731,0.493588655687202,4.15033677922008,0.333690211432188,0.196558995113203,0.224862112384854,0.405720242777006,0.964708639009667,2.29163266603278,1.15078454980324,3.08056930872567,1.92192989231657,1.43768206527355,1.11642284300551,1.5601883655728,2.02063102357689,4.84373016509163,4.82443521363367,0.739012760666419,0.757965647081939,0.325929952884052,0.509235257325564,0.469380496577004,0.837531287209079,1.6663054862021,0.975668239288994,2.52216230569906,1.10732344824387,1.43509291791738,1.3109065177259,2.41758974612254,1.01254341007058,4.52373851817817,1.08781136763742,0,0,0,0,0,0.252470927204373,0.315508219416257,1.17131623288992,0.430846795465598,0.716906393857656,1.78238939265915,1.98153571552183,0.404810701674894,0.584511715822624,0.395287777946524,0,1.84522110770749,0.712262414669021,1.62886959353576,3.62934270539578,0,0,0.604647113929502,1.13163047853539,0,0.614870295887855,2.32585463851399,1.81766864738753,0.712994756769443,0.948110273807448,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.532020700926821,0,0.329098041204242,0.608929898229199,0.469343416127421,0,0.882113592219848,0.32977250588296,0.807322133479528,0.603129249281559,0.716234064018819,0.328281799490123,0.874442509889552,0,0.341741761595705,0.82554747185289,2.59272338317596,0.565105371014073,0.136694227721025,0.228778173206523,2.54967644990783,1.95932033253121,0.967399816630967,1.90934123603023,0.316335993581135,1.21991680276109,1.51207477150522,1.25452977608681,1.74690050996942,2.15782954215713,1.23980183588004,2.6175594198403,0.777689839750757,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.387479470433193,0.337912250981556,0.704143431874524,1.0416350787516,1.04859344425711,0.241584120826006,0,0.316011120628178,0.405450430580328,1.02710957164827,1.68897069871134,0.537080087002444,0.596044064343795,0.721172697119813,0,0.302899349844443,0.838274873204998,0.302478555410522,0.38983152295901,0.192423683280659,0.467507608726276,0.453460767230423,0,0,0.335769232728157,1.54551675225752,1.68914227906064,3.29672923681077,0.857473516316263,2.50786052017682,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0,0.96275762877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|short_description=p8@Vmp1
}}

Revision as of 21:18, 12 September 2013

Short description:p8@Vmp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Vmp1_5end
Coexpression cluster:NA
Association with transcript: -45bp_to_ENSMUST00000145846_5end
EntrezGene:Vmp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Vmp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endodermal cell4.74e-0720
epithelial cell6.83e-0725

Uber anatomy
Ontology termp-valuen
digestive system2.05e-09116
digestive tract2.05e-09116
primitive gut2.05e-09116
epithelial tube2.70e-0947
endoderm-derived structure6.04e-09118
endoderm6.04e-09118
presumptive endoderm6.04e-09118
subdivision of digestive tract1.14e-08114
trunk mesenchyme1.78e-0845
digestive tract diverticulum1.02e-0723
sac1.02e-0723
mucosa1.72e-0715
gastrointestinal system1.92e-0747
liver3.10e-0722
epithelial sac3.10e-0722
digestive gland3.10e-0722
epithelium of foregut-midgut junction3.10e-0722
anatomical boundary3.10e-0722
hepatobiliary system3.10e-0722
foregut-midgut junction3.10e-0722
hepatic diverticulum3.10e-0722
liver primordium3.10e-0722
septum transversum3.10e-0722
liver bud3.10e-0722
unilaminar epithelium6.30e-0766
intestine9.34e-0731







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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