FFCP PHASE1:Mm9::chr11:92960554..92960563,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72605|HGNC=|MCL_coexpression_id=30|UniProt=Q78UF4,P61215,Q3V1V7|association_with_transcript=-40bp_to_ENSMUST00000092780,ENSMUST00000107863,NM_028296,uc007kxj.2_5end|description=CAGE_peak_20_at_Car10_5end|id=chr11:92960554..92960563,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.09e-14!63;UBERON:0000955!3.35e-14!50;UBERON:0006238!3.35e-14!50;UBERON:0001049!1.91e-13!52;UBERON:0005068!1.91e-13!52;UBERON:0006241!1.91e-13!52;UBERON:0007135!1.91e-13!52;UBERON:0002616!1.06e-12!49;UBERON:0002346!1.85e-12!71;UBERON:0003075!1.85e-12!71;UBERON:0007284!1.85e-12!71;UBERON:0001017!2.10e-12!73;UBERON:0005743!2.10e-12!73;UBERON:0000073!6.02e-12!75;UBERON:0001016!6.02e-12!75;UBERON:0003076!4.53e-11!12;UBERON:0003057!4.53e-11!12;UBERON:0004121!1.70e-10!102;UBERON:0000924!1.70e-10!102;UBERON:0006601!1.70e-10!102;UBERON:0007811!1.66e-09!86;UBERON:0000153!2.64e-08!94;UBERON:0004733!4.92e-08!6;UBERON:0004732!4.92e-08!6;UBERON:0002028!4.92e-08!6;UBERON:0007277!4.92e-08!6;UBERON:0003056!1.10e-07!49;UBERON:0002298!3.88e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638436690425939,0.307213066512487,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.854230084794618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,4.1889341362691,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0|short_description=p20@Car10}} | ||
|EntrezGene=72605 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=Q78UF4,P61215,Q3V1V7 | |||
|association_with_transcript=-40bp_to_ENSMUST00000092780,ENSMUST00000107863,NM_028296,uc007kxj.2_5end | |||
|description=CAGE_peak_20_at_Car10_5end | |||
|id=chr11:92960554..92960563,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.09e-14!63;UBERON:0000955!3.35e-14!50;UBERON:0006238!3.35e-14!50;UBERON:0001049!1.91e-13!52;UBERON:0005068!1.91e-13!52;UBERON:0006241!1.91e-13!52;UBERON:0007135!1.91e-13!52;UBERON:0002616!1.06e-12!49;UBERON:0002346!1.85e-12!71;UBERON:0003075!1.85e-12!71;UBERON:0007284!1.85e-12!71;UBERON:0001017!2.10e-12!73;UBERON:0005743!2.10e-12!73;UBERON:0000073!6.02e-12!75;UBERON:0001016!6.02e-12!75;UBERON:0003076!4.53e-11!12;UBERON:0003057!4.53e-11!12;UBERON:0004121!1.70e-10!102;UBERON:0000924!1.70e-10!102;UBERON:0006601!1.70e-10!102;UBERON:0007811!1.66e-09!86;UBERON:0000153!2.64e-08!94;UBERON:0004733!4.92e-08!6;UBERON:0004732!4.92e-08!6;UBERON:0002028!4.92e-08!6;UBERON:0007277!4.92e-08!6;UBERON:0003056!1.10e-07!49;UBERON:0002298!3.88e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638436690425939,0.307213066512487,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.854230084794618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,4.1889341362691,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p20@Car10 | |||
}} |
Revision as of 21:28, 12 September 2013
Short description: | p20@Car10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Car10_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -40bp_to_ENSMUST00000092780, ENSMUST00000107863, NM_028296, uc007kxj.2_5end |
EntrezGene: | Car10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.63e-30 | 4 |
regional part of metencephalon | 5.63e-30 | 4 |
metencephalon | 5.63e-30 | 4 |
future metencephalon | 5.63e-30 | 4 |
rhombic lip | 5.63e-30 | 4 |
segmental subdivision of hindbrain | 1.98e-20 | 6 |
segmental subdivision of nervous system | 1.98e-20 | 6 |
hindbrain | 1.98e-20 | 6 |
presumptive hindbrain | 1.98e-20 | 6 |
posterior neural tube | 8.07e-11 | 12 |
chordal neural plate | 8.07e-11 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.