FFCP PHASE1:Hg19::chr3:159570722..159570733,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15678|TSSclassifier=S|UniProt=C9JWG6|association_with_transcript=0bp_to_ENST00000482804_5end|coexpression_cluster_id=C9|description=CAGE_peak_29_at_SCHIP1_5end|id=chr3:159570722..159570733,+|ontology_enrichment_celltype=CL:0002139!9.28e-13!24;CL:0000115!1.07e-08!35;CL:0000071!3.51e-08!18;CL:0002546!3.51e-08!18|ontology_enrichment_celltype_v019=CL:0002138;1.39e-07;6!CL:0002618;4.90e-07;3|ontology_enrichment_celltype_v019_2=CL:0005020,1.40e-07,6;CL:0002138,1.40e-07,6;CL:0005022,1.40e-07,6;CL:0002618,6.09e-07,3;CL:0000115,6.66e-07,36|ontology_enrichment_development_v019=CL:0005022;1.39e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!3.51e-08!18;UBERON:0004638!3.51e-08!18;UBERON:0004852!3.51e-08!18;UBERON:0002049!1.08e-07!79;UBERON:0007798!1.08e-07!79;UBERON:0000055!1.96e-07!69|ontology_enrichment_uberon_v019=UBERON:0005090;4.20e-11;2!UBERON:0001630;4.20e-11;2!UBERON:0004151;1.34e-07;3!UBERON:0001723;2.89e-07;3!UBERON:0001033;2.89e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005090,4.02e-11,2;UBERON:0001630,4.02e-11,2;UBERON:0004151,1.44e-07,3;UBERON:0001723,3.08e-07,3;UBERON:0001033,3.08e-07,3;UBERON:0010056,3.08e-07,3|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70215567407342,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0.443458794925128,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,1.04142150482278,0,0,0.275118041940067,0.208994966536811,0.516833518338658,2.13459757612026,1.67360306382335,0.805658634218294,0.760272105718513,0.488124115096339,0.735326160691737,0.81014194788176,1.51809538082936,0.898117490504679,1.0135033243499,0,0,0.732806975721629,0,0,0,0.496971951695318,0.25326102332916,0.794455084879313,0,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0.276149695926898,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0.469634776943287,1.15493158208859,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.720599767084807,0.75745460055828,0,0,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0.87192013766656,0.66004457238855,0,0,1.690605505112,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0.207970861530807,0.535286966391485,0.315404830067869,0.468565659970853,0.300946099727719,0,0,0,0.184369168541703,0.434418072340414,0.391602314925481,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0.422206515571503,0,0,1.0795795805107,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.330037999682352,0,0,0,0.096670718292122,0,0,0.137836572484531,0.751941714077915,0.580066775656914,0.170453254832202,0.267096106940212,0,0,0.255225424989168,0,0,1.5740617341532,0,0,0,0,0,0.143124886741991,1.116475108079,0.949138274156178,0,0,2.1396949401696,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,3.27947376023316,0.202910376962704,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.557409525377156,0,0,0,0,0,3.59845090630601,0,0,0,0,0,0,0,0,1.70338495076131,0,0,0.223676107892416,0,0.586164286206121,0,0,0,0,0,0,0.439524537815682,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.067401132980677,2.40773294189637,0,0,0,0,0.394584402849391,1.2099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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |||
|TSSclassifier=S | |||
|UniProt=C9JWG6 | |||
|association_with_transcript=0bp_to_ENST00000482804_5end | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_29_at_SCHIP1_5end | |||
|id=chr3:159570722..159570733,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.28e-13!24;CL:0000115!1.07e-08!35;CL:0000071!3.51e-08!18;CL:0002546!3.51e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.39e-07;6!CL:0002618;4.90e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.40e-07,6;CL:0002138,1.40e-07,6;CL:0005022,1.40e-07,6;CL:0002618,6.09e-07,3;CL:0000115,6.66e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;1.39e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.51e-08!18;UBERON:0004638!3.51e-08!18;UBERON:0004852!3.51e-08!18;UBERON:0002049!1.08e-07!79;UBERON:0007798!1.08e-07!79;UBERON:0000055!1.96e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;4.20e-11;2!UBERON:0001630;4.20e-11;2!UBERON:0004151;1.34e-07;3!UBERON:0001723;2.89e-07;3!UBERON:0001033;2.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,4.02e-11,2;UBERON:0001630,4.02e-11,2;UBERON:0004151,1.44e-07,3;UBERON:0001723,3.08e-07,3;UBERON:0001033,3.08e-07,3;UBERON:0010056,3.08e-07,3 | |||
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| |||
|short_description=p29@SCHIP1 | |||
}} |
Revision as of 22:28, 12 September 2013
Short description: | p29@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_29_at_SCHIP1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000482804_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | C9JWG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.40e-07 | 6 |
endothelial cell of lymphatic vessel | 1.40e-07 | 6 |
vascular lymphangioblast | 1.40e-07 | 6 |
endothelial cell of umbilical vein | 6.09e-07 | 3 |
endothelial cell | 6.66e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
muscle structure | 4.02e-11 | 2 |
muscle organ | 4.02e-11 | 2 |
cardiac chamber | 1.44e-07 | 3 |
tongue | 3.08e-07 | 3 |
gustatory system | 3.08e-07 | 3 |
future tongue | 3.08e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.