FFCP PHASE1:Hg19::chr3:16552661..16552674,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C78|description=CAGE_peak_at_chr3:16552661..16552674,-|id=chr3:16552661..16552674,-|ontology_enrichment_celltype=CL:0000945!9.64e-36!24;CL:0000826!9.64e-36!24;CL:0000838!7.45e-35!52;CL:0000542!3.99e-34!53;CL:0000051!3.99e-34!53;CL:0000738!6.64e-15!140;CL:0002087!1.25e-14!119;CL:0002031!6.87e-14!124;CL:0000988!9.55e-12!182;CL:0000037!2.41e-11!172;CL:0000566!2.41e-11!172;CL:0002032!1.07e-10!165;CL:0000837!1.07e-10!165;CL:0000898!4.50e-09!3;CL:0000819!9.71e-08!1;CL:0000810!1.83e-07!1;CL:0000895!1.83e-07!1;CL:0002436!1.83e-07!1;CL:0002427!1.83e-07!1;CL:0002428!1.83e-07!1;CL:0002429!1.83e-07!1;CL:0002433!1.83e-07!1;CL:0002431!1.83e-07!1;CL:0002432!1.83e-07!1;CL:0000236!2.89e-07!14|ontology_enrichment_celltype_v019=CL:0000945;3.89e-55;24!CL:0000785;6.78e-18;1!CL:0000819;6.78e-18;1!CL:0000542;1.75e-14;53|ontology_enrichment_celltype_v019_2=CL:0000945,3.54e-55,24;CL:0000826,3.54e-55,24;CL:0000838,3.26e-25,52;CL:0000542,1.00e-24,53;CL:0000051,1.00e-24,53;CL:0000819,7.37e-18,1;CL:0002087,6.13e-11,115;CL:0002031,1.86e-10,120;CL:0000785,1.33e-09,2;CL:0000955,1.33e-09,2;CL:0000818,1.33e-09,2;CL:0000954,1.33e-09,2;CL:0000816,1.33e-09,2;CL:0000738,3.82e-09,136;CL:0002032,1.31e-07,161;CL:0000837,1.31e-07,161;CL:0000037,2.94e-07,168;CL:0000988,7.55e-07,177;CL:0000817,8.15e-07,3|ontology_enrichment_development_v019=UBERON:0001045;1.33e-17;1!CL:0000051;1.75e-14;53!CL:0000954;1.27e-09;2|ontology_enrichment_disease=DOID:0060058!2.24e-22!10;DOID:630!8.54e-08!1;DOID:0050177!8.54e-08!1;DOID:0050427!8.54e-08!1;DOID:0060073!9.71e-08!1;DOID:8675!9.71e-08!1;DOID:0060060!1.72e-07!1;DOID:0060061!1.72e-07!1;DOID:8691!1.72e-07!1|ontology_enrichment_disease_v019=DOID:0060058;3.90e-41;10!DOID:630;6.78e-18;1!DOID:0050177;6.78e-18;1!DOID:0060073;6.78e-18;1!DOID:8675;6.78e-18;1!DOID:0050427;6.78e-18;1|ontology_enrichment_disease_v019_2=DOID:0060058,3.30e-41,10;DOID:630,5.26e-18,1;DOID:0050177,5.26e-18,1;DOID:0050427,5.26e-18,1;DOID:0060073,7.37e-18,1;DOID:8675,7.37e-18,1;DOID:2531,3.67e-08,51;DOID:0060083,3.67e-08,51|ontology_enrichment_uberon=UBERON:0004177!5.03e-14!7;UBERON:0002106!3.52e-09!3;UBERON:0004854!3.52e-09!3;UBERON:0009034!3.52e-09!3;UBERON:0002095!3.52e-09!3;UBERON:0004782!3.52e-09!3;UBERON:0003281!3.52e-09!3;UBERON:0009664!3.52e-09!3;UBERON:0002296!3.52e-09!3;UBERON:0005602!3.52e-09!3;UBERON:0001179!3.52e-09!3;UBERON:0006293!3.52e-09!3;UBERON:0002372!1.25e-07!1;UBERON:0001961!1.25e-07!1;UBERON:0001744!1.25e-07!1;UBERON:0001735!1.25e-07!1;UBERON:0001154!1.33e-07!1;UBERON:0001153!1.33e-07!1;UBERON:0002370!7.72e-07!4;UBERON:0005058!7.72e-07!4;UBERON:0009113!7.72e-07!4;UBERON:0003295!7.72e-07!4;UBERON:0005562!7.72e-07!4|ontology_enrichment_uberon_v019=UBERON:0002372;1.33e-17;1!UBERON:0001154;1.33e-17;1!UBERON:0001153;1.33e-17;1!UBERON:0009854;1.33e-17;1!UBERON:0001961;1.33e-17;1!UBERON:0001744;1.33e-17;1!UBERON:0001042;1.33e-17;1!UBERON:0001735;1.33e-17;1!UBERON:0006562;1.78e-09;2!UBERON:0002106;9.91e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.44e-17,1;UBERON:0001961,1.44e-17,1;UBERON:0001744,1.44e-17,1;UBERON:0001735,1.44e-17,1;UBERON:0001154,1.70e-17,1;UBERON:0001153,1.70e-17,1;UBERON:0001045,1.70e-17,1;UBERON:0002106,9.64e-07,3;UBERON:0004854,9.64e-07,3;UBERON:0009034,9.64e-07,3;UBERON:0002095,9.64e-07,3;UBERON:0004782,9.64e-07,3;UBERON:0003281,9.64e-07,3;UBERON:0009664,9.64e-07,3;UBERON:0002296,9.64e-07,3;UBERON:0005602,9.64e-07,3;UBERON:0001179,9.64e-07,3;UBERON:0006293,9.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,3.36612416744778,3.69940672174292,0,0,0,0,0,0,2.63388481973026,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,2.33861130376032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr3:16552661..16552674,- | |||
|id=chr3:16552661..16552674,- | |||
|ontology_enrichment_celltype=CL:0000945!9.64e-36!24;CL:0000826!9.64e-36!24;CL:0000838!7.45e-35!52;CL:0000542!3.99e-34!53;CL:0000051!3.99e-34!53;CL:0000738!6.64e-15!140;CL:0002087!1.25e-14!119;CL:0002031!6.87e-14!124;CL:0000988!9.55e-12!182;CL:0000037!2.41e-11!172;CL:0000566!2.41e-11!172;CL:0002032!1.07e-10!165;CL:0000837!1.07e-10!165;CL:0000898!4.50e-09!3;CL:0000819!9.71e-08!1;CL:0000810!1.83e-07!1;CL:0000895!1.83e-07!1;CL:0002436!1.83e-07!1;CL:0002427!1.83e-07!1;CL:0002428!1.83e-07!1;CL:0002429!1.83e-07!1;CL:0002433!1.83e-07!1;CL:0002431!1.83e-07!1;CL:0002432!1.83e-07!1;CL:0000236!2.89e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.89e-55;24!CL:0000785;6.78e-18;1!CL:0000819;6.78e-18;1!CL:0000542;1.75e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.54e-55,24;CL:0000826,3.54e-55,24;CL:0000838,3.26e-25,52;CL:0000542,1.00e-24,53;CL:0000051,1.00e-24,53;CL:0000819,7.37e-18,1;CL:0002087,6.13e-11,115;CL:0002031,1.86e-10,120;CL:0000785,1.33e-09,2;CL:0000955,1.33e-09,2;CL:0000818,1.33e-09,2;CL:0000954,1.33e-09,2;CL:0000816,1.33e-09,2;CL:0000738,3.82e-09,136;CL:0002032,1.31e-07,161;CL:0000837,1.31e-07,161;CL:0000037,2.94e-07,168;CL:0000988,7.55e-07,177;CL:0000817,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.33e-17;1!CL:0000051;1.75e-14;53!CL:0000954;1.27e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.24e-22!10;DOID:630!8.54e-08!1;DOID:0050177!8.54e-08!1;DOID:0050427!8.54e-08!1;DOID:0060073!9.71e-08!1;DOID:8675!9.71e-08!1;DOID:0060060!1.72e-07!1;DOID:0060061!1.72e-07!1;DOID:8691!1.72e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.90e-41;10!DOID:630;6.78e-18;1!DOID:0050177;6.78e-18;1!DOID:0060073;6.78e-18;1!DOID:8675;6.78e-18;1!DOID:0050427;6.78e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.30e-41,10;DOID:630,5.26e-18,1;DOID:0050177,5.26e-18,1;DOID:0050427,5.26e-18,1;DOID:0060073,7.37e-18,1;DOID:8675,7.37e-18,1;DOID:2531,3.67e-08,51;DOID:0060083,3.67e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.03e-14!7;UBERON:0002106!3.52e-09!3;UBERON:0004854!3.52e-09!3;UBERON:0009034!3.52e-09!3;UBERON:0002095!3.52e-09!3;UBERON:0004782!3.52e-09!3;UBERON:0003281!3.52e-09!3;UBERON:0009664!3.52e-09!3;UBERON:0002296!3.52e-09!3;UBERON:0005602!3.52e-09!3;UBERON:0001179!3.52e-09!3;UBERON:0006293!3.52e-09!3;UBERON:0002372!1.25e-07!1;UBERON:0001961!1.25e-07!1;UBERON:0001744!1.25e-07!1;UBERON:0001735!1.25e-07!1;UBERON:0001154!1.33e-07!1;UBERON:0001153!1.33e-07!1;UBERON:0002370!7.72e-07!4;UBERON:0005058!7.72e-07!4;UBERON:0009113!7.72e-07!4;UBERON:0003295!7.72e-07!4;UBERON:0005562!7.72e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.33e-17;1!UBERON:0001154;1.33e-17;1!UBERON:0001153;1.33e-17;1!UBERON:0009854;1.33e-17;1!UBERON:0001961;1.33e-17;1!UBERON:0001744;1.33e-17;1!UBERON:0001042;1.33e-17;1!UBERON:0001735;1.33e-17;1!UBERON:0006562;1.78e-09;2!UBERON:0002106;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.44e-17,1;UBERON:0001961,1.44e-17,1;UBERON:0001744,1.44e-17,1;UBERON:0001735,1.44e-17,1;UBERON:0001154,1.70e-17,1;UBERON:0001153,1.70e-17,1;UBERON:0001045,1.70e-17,1;UBERON:0002106,9.64e-07,3;UBERON:0004854,9.64e-07,3;UBERON:0009034,9.64e-07,3;UBERON:0002095,9.64e-07,3;UBERON:0004782,9.64e-07,3;UBERON:0003281,9.64e-07,3;UBERON:0009664,9.64e-07,3;UBERON:0002296,9.64e-07,3;UBERON:0005602,9.64e-07,3;UBERON:0001179,9.64e-07,3;UBERON:0006293,9.64e-07,3 | |||
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|short_description=p@chr3:16552661..16552674,- | |||
}} |
Revision as of 22:34, 12 September 2013
Short description: | p@chr3:16552661..16552674, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:16552661..16552674, - |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.54e-55 | 24 |
pro-B cell | 3.54e-55 | 24 |
lymphoid lineage restricted progenitor cell | 3.26e-25 | 52 |
lymphocyte | 1.00e-24 | 53 |
common lymphoid progenitor | 1.00e-24 | 53 |
B-1 B cell | 7.37e-18 | 1 |
nongranular leukocyte | 6.13e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.86e-10 | 120 |
mature B cell | 1.33e-09 | 2 |
pre-B-II cell | 1.33e-09 | 2 |
transitional stage B cell | 1.33e-09 | 2 |
small pre-B-II cell | 1.33e-09 | 2 |
immature B cell | 1.33e-09 | 2 |
leukocyte | 3.82e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-07 | 161 |
hematopoietic stem cell | 2.94e-07 | 168 |
hematopoietic cell | 7.55e-07 | 177 |
precursor B cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.44e-17 | 1 |
mucosa-associated lymphoid tissue | 1.44e-17 | 1 |
lymphoid tissue | 1.44e-17 | 1 |
tonsillar ring | 1.44e-17 | 1 |
vermiform appendix | 1.70e-17 | 1 |
caecum | 1.70e-17 | 1 |
midgut | 1.70e-17 | 1 |
spleen | 9.64e-07 | 3 |
gastrointestinal system mesentery | 9.64e-07 | 3 |
stomach region | 9.64e-07 | 3 |
mesentery | 9.64e-07 | 3 |
gastrointestinal system serosa | 9.64e-07 | 3 |
mesentery of stomach | 9.64e-07 | 3 |
gut mesentery | 9.64e-07 | 3 |
dorsal mesentery | 9.64e-07 | 3 |
dorsal mesogastrium | 9.64e-07 | 3 |
peritoneal cavity | 9.64e-07 | 3 |
spleen primordium | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.30e-41 | 10 |
genetic disease | 5.26e-18 | 1 |
monogenic disease | 5.26e-18 | 1 |
xeroderma pigmentosum | 5.26e-18 | 1 |
lymphatic system cancer | 7.37e-18 | 1 |
lymphosarcoma | 7.37e-18 | 1 |
hematologic cancer | 3.67e-08 | 51 |
immune system cancer | 3.67e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.