FFCP PHASE1:Mm9::chr12:32808688..32808695,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=15|UniProt=|association_with_transcript=-121bp_to_uc007nhz.1_5end|description=CAGE_peak_5_at_uc007nhz.1_5end|id=chr12:32808688..32808695,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,9.50e-13,3;CL:0002006,9.50e-13,3;CL:0002024,9.50e-13,3;CL:0000553,7.99e-07,6;CL:0000556,7.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!3.77e-08!6;UBERON:0004457!3.77e-08!6;UBERON:0000042!3.77e-08!6;UBERON:0004854!3.77e-08!6;UBERON:0009034!3.77e-08!6;UBERON:0002095!3.77e-08!6;UBERON:0004782!3.77e-08!6;UBERON:0003281!3.77e-08!6;UBERON:0009664!3.77e-08!6;UBERON:0002296!3.77e-08!6;UBERON:0005602!3.77e-08!6;UBERON:0001179!3.77e-08!6;UBERON:0006293!3.77e-08!6;UBERON:0005172!1.01e-07!49;UBERON:0005173!1.01e-07!49;UBERON:0002417!1.01e-07!49;UBERON:0000916!1.01e-07!49;UBERON:0000981!1.42e-07!4;UBERON:0002495!1.42e-07!4;UBERON:0003608!1.42e-07!4;UBERON:0003826!1.42e-07!4;UBERON:0008202!1.42e-07!4;UBERON:0004375!1.42e-07!4;UBERON:0002428!1.42e-07!4;UBERON:0003464!1.42e-07!4;UBERON:0003606!1.42e-07!4;UBERON:0009749!1.42e-07!4;UBERON:0003860!1.42e-07!4;UBERON:0005856!1.42e-07!4;UBERON:0005866!1.42e-07!4;UBERON:0007828!1.42e-07!4;UBERON:0005254!1.42e-07!4;UBERON:0001271!1.42e-07!4;UBERON:0002091!1.42e-07!4;UBERON:0001464!1.42e-07!4;UBERON:0003285!1.42e-07!4;UBERON:0010129!1.42e-07!4;UBERON:0006234!1.42e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.07e-14,6;UBERON:0004457,4.07e-14,6;UBERON:0000042,4.07e-14,6;UBERON:0004854,4.07e-14,6;UBERON:0009034,4.07e-14,6;UBERON:0002095,4.07e-14,6;UBERON:0004782,4.07e-14,6;UBERON:0003281,4.07e-14,6;UBERON:0009664,4.07e-14,6;UBERON:0002296,4.07e-14,6;UBERON:0005602,4.07e-14,6;UBERON:0001179,4.07e-14,6;UBERON:0006293,4.07e-14,6;UBERON:0005172,4.25e-11,49;UBERON:0005173,4.25e-11,49;UBERON:0002417,4.25e-11,49;UBERON:0000916,4.25e-11,49;UBERON:0002107,5.83e-10,22;UBERON:0007499,5.83e-10,22;UBERON:0006925,5.83e-10,22;UBERON:0009497,5.83e-10,22;UBERON:0000015,5.83e-10,22;UBERON:0002423,5.83e-10,22;UBERON:0006235,5.83e-10,22;UBERON:0008835,5.83e-10,22;UBERON:0003894,5.83e-10,22;UBERON:0004161,5.83e-10,22;UBERON:0008836,5.83e-10,22;UBERON:0009854,1.57e-09,23;UBERON:0009856,1.57e-09,23;UBERON:0002365,8.96e-09,25;UBERON:0002330,8.96e-09,25;UBERON:0003887,1.03e-08,10;UBERON:0009569,4.02e-08,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.61980213911861,1.39912375625629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.83422552858047,1.57247196090562,1.12431056192427,1.01430060694251,1.68824011826692,1.2731292589071,0.575392274901621,0.486405680325106,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.925972636848558,2.63715839806567,1.91371918809435,1.37266903923914,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0.476872379894642,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0|short_description=p5@uc007nhz.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt= | |||
|association_with_transcript=-121bp_to_uc007nhz.1_5end | |||
|description=CAGE_peak_5_at_uc007nhz.1_5end | |||
|id=chr12:32808688..32808695,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,9.50e-13,3;CL:0002006,9.50e-13,3;CL:0002024,9.50e-13,3;CL:0000553,7.99e-07,6;CL:0000556,7.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!3.77e-08!6;UBERON:0004457!3.77e-08!6;UBERON:0000042!3.77e-08!6;UBERON:0004854!3.77e-08!6;UBERON:0009034!3.77e-08!6;UBERON:0002095!3.77e-08!6;UBERON:0004782!3.77e-08!6;UBERON:0003281!3.77e-08!6;UBERON:0009664!3.77e-08!6;UBERON:0002296!3.77e-08!6;UBERON:0005602!3.77e-08!6;UBERON:0001179!3.77e-08!6;UBERON:0006293!3.77e-08!6;UBERON:0005172!1.01e-07!49;UBERON:0005173!1.01e-07!49;UBERON:0002417!1.01e-07!49;UBERON:0000916!1.01e-07!49;UBERON:0000981!1.42e-07!4;UBERON:0002495!1.42e-07!4;UBERON:0003608!1.42e-07!4;UBERON:0003826!1.42e-07!4;UBERON:0008202!1.42e-07!4;UBERON:0004375!1.42e-07!4;UBERON:0002428!1.42e-07!4;UBERON:0003464!1.42e-07!4;UBERON:0003606!1.42e-07!4;UBERON:0009749!1.42e-07!4;UBERON:0003860!1.42e-07!4;UBERON:0005856!1.42e-07!4;UBERON:0005866!1.42e-07!4;UBERON:0007828!1.42e-07!4;UBERON:0005254!1.42e-07!4;UBERON:0001271!1.42e-07!4;UBERON:0002091!1.42e-07!4;UBERON:0001464!1.42e-07!4;UBERON:0003285!1.42e-07!4;UBERON:0010129!1.42e-07!4;UBERON:0006234!1.42e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.07e-14,6;UBERON:0004457,4.07e-14,6;UBERON:0000042,4.07e-14,6;UBERON:0004854,4.07e-14,6;UBERON:0009034,4.07e-14,6;UBERON:0002095,4.07e-14,6;UBERON:0004782,4.07e-14,6;UBERON:0003281,4.07e-14,6;UBERON:0009664,4.07e-14,6;UBERON:0002296,4.07e-14,6;UBERON:0005602,4.07e-14,6;UBERON:0001179,4.07e-14,6;UBERON:0006293,4.07e-14,6;UBERON:0005172,4.25e-11,49;UBERON:0005173,4.25e-11,49;UBERON:0002417,4.25e-11,49;UBERON:0000916,4.25e-11,49;UBERON:0002107,5.83e-10,22;UBERON:0007499,5.83e-10,22;UBERON:0006925,5.83e-10,22;UBERON:0009497,5.83e-10,22;UBERON:0000015,5.83e-10,22;UBERON:0002423,5.83e-10,22;UBERON:0006235,5.83e-10,22;UBERON:0008835,5.83e-10,22;UBERON:0003894,5.83e-10,22;UBERON:0004161,5.83e-10,22;UBERON:0008836,5.83e-10,22;UBERON:0009854,1.57e-09,23;UBERON:0009856,1.57e-09,23;UBERON:0002365,8.96e-09,25;UBERON:0002330,8.96e-09,25;UBERON:0003887,1.03e-08,10;UBERON:0009569,4.02e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.61980213911861,1.39912375625629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.83422552858047,1.57247196090562,1.12431056192427,1.01430060694251,1.68824011826692,1.2731292589071,0.575392274901621,0.486405680325106,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.925972636848558,2.63715839806567,1.91371918809435,1.37266903923914,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0,0.476872379894642,0,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p5@uc007nhz.1 | |||
}} |
Revision as of 22:43, 12 September 2013
Short description: | p5@uc007nhz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_uc007nhz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -121bp_to_uc007nhz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 9.50e-13 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 9.50e-13 | 3 |
Kit-positive megakaryocyte progenitor cell | 9.50e-13 | 3 |
megakaryocyte progenitor cell | 7.99e-07 | 6 |
megakaryocyte | 7.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.07e-14 | 6 |
cavity lining | 4.07e-14 | 6 |
serous membrane | 4.07e-14 | 6 |
gastrointestinal system mesentery | 4.07e-14 | 6 |
stomach region | 4.07e-14 | 6 |
mesentery | 4.07e-14 | 6 |
gastrointestinal system serosa | 4.07e-14 | 6 |
mesentery of stomach | 4.07e-14 | 6 |
gut mesentery | 4.07e-14 | 6 |
dorsal mesentery | 4.07e-14 | 6 |
dorsal mesogastrium | 4.07e-14 | 6 |
peritoneal cavity | 4.07e-14 | 6 |
spleen primordium | 4.07e-14 | 6 |
abdomen element | 4.25e-11 | 49 |
abdominal segment element | 4.25e-11 | 49 |
abdominal segment of trunk | 4.25e-11 | 49 |
abdomen | 4.25e-11 | 49 |
liver | 5.83e-10 | 22 |
epithelial sac | 5.83e-10 | 22 |
digestive gland | 5.83e-10 | 22 |
epithelium of foregut-midgut junction | 5.83e-10 | 22 |
anatomical boundary | 5.83e-10 | 22 |
hepatobiliary system | 5.83e-10 | 22 |
foregut-midgut junction | 5.83e-10 | 22 |
hepatic diverticulum | 5.83e-10 | 22 |
liver primordium | 5.83e-10 | 22 |
septum transversum | 5.83e-10 | 22 |
liver bud | 5.83e-10 | 22 |
digestive tract diverticulum | 1.57e-09 | 23 |
sac | 1.57e-09 | 23 |
exocrine gland | 8.96e-09 | 25 |
exocrine system | 8.96e-09 | 25 |
intraembryonic coelom | 1.03e-08 | 10 |
subdivision of trunk | 4.02e-08 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.