FFCP PHASE1:Hg19::chr3:34546810..34546816,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C15|description=CAGE_peak_at_chr3:34546810..34546816,+|id=chr3:34546810..34546816,+|ontology_enrichment_celltype=CL:0000236!5.96e-12!14;CL:0000945!7.87e-10!24;CL:0000826!7.87e-10!24|ontology_enrichment_celltype_v019=CL:0000167;1.93e-16;1!CL:0000164;1.93e-16;1!CL:0000502;1.93e-16;1!CL:0000172;1.93e-16;1!CL:0000173;1.93e-16;1!CL:0002535;3.71e-09;2|ontology_enrichment_celltype_v019_2=CL:0000167,1.21e-16,1;CL:0000164,1.21e-16,1;CL:0000502,1.21e-16,1;CL:0000172,1.21e-16,1;CL:0000173,1.21e-16,1;CL:0002351,1.21e-16,1;CL:0002535,3.71e-09,2|ontology_enrichment_development_v019=CL:0002351;1.93e-16;1|ontology_enrichment_disease=DOID:171!3.74e-07!10;DOID:3119!4.98e-07!14|ontology_enrichment_disease_v019=DOID:4430;1.93e-16;1!DOID:171;3.20e-14;10!DOID:3119;1.44e-10;14!DOID:3095;8.96e-07;22!DOID:2994;8.96e-07;22|ontology_enrichment_disease_v019_2=DOID:4430,1.21e-16,1;DOID:171,3.06e-14,10;DOID:3119,1.47e-10,14;DOID:0050687,6.73e-08,143;DOID:3095,8.78e-07,22;DOID:2994,8.78e-07,22|ontology_enrichment_uberon=UBERON:0002619!2.33e-07!22;UBERON:0001869!4.55e-07!32;UBERON:0000200!7.14e-07!6|ontology_enrichment_uberon_v019=UBERON:0002346;4.51e-16;4!UBERON:0000923;4.51e-16;4!UBERON:0010316;4.51e-16;4!UBERON:0005291;4.51e-16;4!UBERON:0002050;4.66e-13;5!UBERON:0005423;4.66e-13;5!UBERON:0006955;3.71e-09;2!UBERON:0004801;3.71e-09;2!UBERON:0002370;6.93e-09;2!UBERON:0005058;6.93e-09;2!UBERON:0009113;6.93e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.71e-09,2;UBERON:0004801,3.71e-09,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,1.14950487990897,0,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.0025734630388,0,0,3.52705846995986,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0,0.288180834308212,0,2.9171149636534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.323474434190045,0,0,0.33946505990805,1.06287460050841,1.36329340684902,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18845852677505,0,0,0,2.71733118420012,0.0771741581079447,0.218559560503957,2.35158648180761,0,1.88541237681301,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0.387533459016037,1.36564371450887,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233|short_description=p@chr3:34546810..34546816,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr3:34546810..34546816,+ | |||
|id=chr3:34546810..34546816,+ | |||
|ontology_enrichment_celltype=CL:0000236!5.96e-12!14;CL:0000945!7.87e-10!24;CL:0000826!7.87e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.93e-16;1!CL:0000164;1.93e-16;1!CL:0000502;1.93e-16;1!CL:0000172;1.93e-16;1!CL:0000173;1.93e-16;1!CL:0002535;3.71e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.21e-16,1;CL:0000164,1.21e-16,1;CL:0000502,1.21e-16,1;CL:0000172,1.21e-16,1;CL:0000173,1.21e-16,1;CL:0002351,1.21e-16,1;CL:0002535,3.71e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.93e-16;1 | |||
|ontology_enrichment_disease=DOID:171!3.74e-07!10;DOID:3119!4.98e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.93e-16;1!DOID:171;3.20e-14;10!DOID:3119;1.44e-10;14!DOID:3095;8.96e-07;22!DOID:2994;8.96e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.21e-16,1;DOID:171,3.06e-14,10;DOID:3119,1.47e-10,14;DOID:0050687,6.73e-08,143;DOID:3095,8.78e-07,22;DOID:2994,8.78e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.33e-07!22;UBERON:0001869!4.55e-07!32;UBERON:0000200!7.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.51e-16;4!UBERON:0000923;4.51e-16;4!UBERON:0010316;4.51e-16;4!UBERON:0005291;4.51e-16;4!UBERON:0002050;4.66e-13;5!UBERON:0005423;4.66e-13;5!UBERON:0006955;3.71e-09;2!UBERON:0004801;3.71e-09;2!UBERON:0002370;6.93e-09;2!UBERON:0005058;6.93e-09;2!UBERON:0009113;6.93e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.71e-09,2;UBERON:0004801,3.71e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,1.09227722252426,0,0.426730222566507,0.400395987036012,1.14950487990897,0,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.0025734630388,0,0,3.52705846995986,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0,0.288180834308212,0,2.9171149636534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.323474434190045,0,0,0.33946505990805,1.06287460050841,1.36329340684902,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18845852677505,0,0,0,2.71733118420012,0.0771741581079447,0.218559560503957,2.35158648180761,0,1.88541237681301,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0.387533459016037,1.36564371450887,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.603821380773079,0.320568492303233 | |||
|short_description=p@chr3:34546810..34546816,+ | |||
}} |
Revision as of 23:55, 12 September 2013
Short description: | p@chr3:34546810..34546816, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:34546810..34546816, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.21e-16 | 1 |
enteroendocrine cell | 1.21e-16 | 1 |
type D enteroendocrine cell | 1.21e-16 | 1 |
somatostatin secreting cell | 1.21e-16 | 1 |
pancreatic D cell | 1.21e-16 | 1 |
progenitor cell of endocrine pancreas | 1.21e-16 | 1 |
epithelial cell of cervix | 3.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.71e-09 | 2 |
cervix epithelium | 3.71e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.21e-16 | 1 |
neuroectodermal tumor | 3.06e-14 | 10 |
gastrointestinal system cancer | 1.47e-10 | 14 |
cell type cancer | 6.73e-08 | 143 |
germ cell and embryonal cancer | 8.78e-07 | 22 |
germ cell cancer | 8.78e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.