FFCP PHASE1:Mm9::chr13:14155512..14155523,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14593|HGNC=|MCL_coexpression_id=24|UniProt=Q9CZZ6|association_with_transcript=137bp_to_ENSMUST00000021733_5end|description=CAGE_peak_3_at_Ggps1_5end|id=chr13:14155512..14155523,-|ontology_enrichment_celltype=CL:0002371!3.56e-14!118;CL:0000548!1.04e-13!115;CL:0000004!1.04e-13!115;CL:0000255!1.04e-13!115;CL:0000144!1.06e-13!121;CL:0000012!1.06e-13!121;CL:0002321!6.50e-10!70;CL:0000220!6.50e-10!70;CL:0000034!1.08e-07!97;CL:0000723!6.67e-07!91;CL:0000048!6.67e-07!91;CL:0000239!8.76e-07!6;CL:0000677!8.76e-07!6;CL:0000212!8.76e-07!6;CL:0000584!8.76e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-13,6;CL:0000677,1.39e-13,6;CL:0000584,1.39e-13,6;CL:0000066,7.17e-12,25;CL:0000075,1.69e-11,7;CL:0002321,2.84e-09,70;CL:0000222,2.91e-09,7;CL:0000223,7.91e-09,20;CL:0002563,1.01e-08,9;CL:0002251,1.01e-08,9;CL:0000680,5.59e-08,6;CL:0000187,5.59e-08,6;CL:0000056,5.59e-08,6;CL:0000682,1.76e-07,3;CL:0000473,2.92e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.84e-09!15;UBERON:0000010!8.19e-08!11;UBERON:0001242!2.10e-07!13;UBERON:0000060!2.10e-07!13;UBERON:0001262!2.10e-07!13;UBERON:0004786!2.10e-07!13;UBERON:0004923!8.50e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.66e-16,15;UBERON:0001242,1.77e-12,13;UBERON:0001262,1.77e-12,13;UBERON:0004786,1.77e-12,13;UBERON:0000010,3.47e-09,11;UBERON:0004923,6.47e-09,24;UBERON:0003350,1.01e-08,9;UBERON:0004808,1.01e-08,9;UBERON:0001277,1.01e-08,9;UBERON:0000485,5.89e-07,11;UBERON:0000331,5.91e-07,3;UBERON:0002116,5.91e-07,3;UBERON:0001204,5.91e-07,3;UBERON:0001168,5.91e-07,3|phase1_expression=0.320297694209588,18.1467211972468,16.3799726180233,20.5675663688644,17.0304548181758,7.05092942029937,8.87728034262997,1.93684985162364,0.281577444303333,9.83071010552373,0,1.43589886191606,0.171200729931206,1.57356724354195,0,0,0,0,0,0.42438965179803,0.935476191661768,0,0,6.71968175732308,6.8822784320151,9.18771142584032,12.9228598847722,9.48073423817912,5.70070258369122,5.29263272495855,5.09980174507201,1.90509202037889,1.23012957516914,0,0,0,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,2.64383317748712,2.23029248682932,1.46837401729345,0,0.436050312760893,0.878744730937887,0.388859798148567,0.279972843250725,0,0,0,0,3.60163210450326,0.85960031981627,4.64104883049698,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0,0,0,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.274462930807229,0,0,0,0,0,0.427115042397309,0,1.59025005999687,1.66257432234928,1.15945795480671,0,6.79971333707751,2.69851595818909,0,0.448026887097336,1.12355536105401,2.04516387093669,0.779358013808606,1.06001872353102,0.14084341977668,2.56652954828636,0,0,0,0,0,1.7127581957859,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,5.28901133327089,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,4.52373851817817,1.08781136763742,0,0,0,0,1.3114795630134,0,1.26203287766503,1.56175497718655,0.430846795465598,0.716906393857656,1.11399337041197,0.566153061577665,1.61924280669958,2.04579100537918,2.37172666767914,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.704015124191131,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,1.03691978633434,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0,0,0,0.887943813496259,1.34570784914214,1.84673078000486,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p3@Ggps1}} | ||
|EntrezGene=14593 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q9CZZ6 | |||
|association_with_transcript=137bp_to_ENSMUST00000021733_5end | |||
|description=CAGE_peak_3_at_Ggps1_5end | |||
|id=chr13:14155512..14155523,- | |||
|ontology_enrichment_celltype=CL:0002371!3.56e-14!118;CL:0000548!1.04e-13!115;CL:0000004!1.04e-13!115;CL:0000255!1.04e-13!115;CL:0000144!1.06e-13!121;CL:0000012!1.06e-13!121;CL:0002321!6.50e-10!70;CL:0000220!6.50e-10!70;CL:0000034!1.08e-07!97;CL:0000723!6.67e-07!91;CL:0000048!6.67e-07!91;CL:0000239!8.76e-07!6;CL:0000677!8.76e-07!6;CL:0000212!8.76e-07!6;CL:0000584!8.76e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.39e-13,6;CL:0000677,1.39e-13,6;CL:0000584,1.39e-13,6;CL:0000066,7.17e-12,25;CL:0000075,1.69e-11,7;CL:0002321,2.84e-09,70;CL:0000222,2.91e-09,7;CL:0000223,7.91e-09,20;CL:0002563,1.01e-08,9;CL:0002251,1.01e-08,9;CL:0000680,5.59e-08,6;CL:0000187,5.59e-08,6;CL:0000056,5.59e-08,6;CL:0000682,1.76e-07,3;CL:0000473,2.92e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.84e-09!15;UBERON:0000010!8.19e-08!11;UBERON:0001242!2.10e-07!13;UBERON:0000060!2.10e-07!13;UBERON:0001262!2.10e-07!13;UBERON:0004786!2.10e-07!13;UBERON:0004923!8.50e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.66e-16,15;UBERON:0001242,1.77e-12,13;UBERON:0001262,1.77e-12,13;UBERON:0004786,1.77e-12,13;UBERON:0000010,3.47e-09,11;UBERON:0004923,6.47e-09,24;UBERON:0003350,1.01e-08,9;UBERON:0004808,1.01e-08,9;UBERON:0001277,1.01e-08,9;UBERON:0000485,5.89e-07,11;UBERON:0000331,5.91e-07,3;UBERON:0002116,5.91e-07,3;UBERON:0001204,5.91e-07,3;UBERON:0001168,5.91e-07,3 | |||
|phase1_expression=0.320297694209588,18.1467211972468,16.3799726180233,20.5675663688644,17.0304548181758,7.05092942029937,8.87728034262997,1.93684985162364,0.281577444303333,9.83071010552373,0,1.43589886191606,0.171200729931206,1.57356724354195,0,0,0,0,0,0.42438965179803,0.935476191661768,0,0,6.71968175732308,6.8822784320151,9.18771142584032,12.9228598847722,9.48073423817912,5.70070258369122,5.29263272495855,5.09980174507201,1.90509202037889,1.23012957516914,0,0,0,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,2.64383317748712,2.23029248682932,1.46837401729345,0,0.436050312760893,0.878744730937887,0.388859798148567,0.279972843250725,0,0,0,0,3.60163210450326,0.85960031981627,4.64104883049698,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0,0,0,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.274462930807229,0,0,0,0,0,0.427115042397309,0,1.59025005999687,1.66257432234928,1.15945795480671,0,6.79971333707751,2.69851595818909,0,0.448026887097336,1.12355536105401,2.04516387093669,0.779358013808606,1.06001872353102,0.14084341977668,2.56652954828636,0,0,0,0,0,1.7127581957859,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,5.28901133327089,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,4.52373851817817,1.08781136763742,0,0,0,0,1.3114795630134,0,1.26203287766503,1.56175497718655,0.430846795465598,0.716906393857656,1.11399337041197,0.566153061577665,1.61924280669958,2.04579100537918,2.37172666767914,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.704015124191131,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,1.03691978633434,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0,0,0,0.887943813496259,1.34570784914214,1.84673078000486,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p3@Ggps1 | |||
}} |
Revision as of 00:02, 13 September 2013
Short description: | p3@Ggps1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ggps1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 137bp_to_ENSMUST00000021733_5end |
EntrezGene: | Ggps1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.39e-13 | 6 |
gut absorptive cell | 1.39e-13 | 6 |
enterocyte | 1.39e-13 | 6 |
epithelial cell | 7.17e-12 | 25 |
columnar/cuboidal epithelial cell | 1.69e-11 | 7 |
embryonic cell | 2.84e-09 | 70 |
mesodermal cell | 2.91e-09 | 7 |
endodermal cell | 7.91e-09 | 20 |
intestinal epithelial cell | 1.01e-08 | 9 |
epithelial cell of alimentary canal | 1.01e-08 | 9 |
muscle precursor cell | 5.59e-08 | 6 |
muscle cell | 5.59e-08 | 6 |
myoblast | 5.59e-08 | 6 |
M cell of gut | 1.76e-07 | 3 |
defensive cell | 2.92e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.66e-16 | 15 |
intestinal mucosa | 1.77e-12 | 13 |
wall of intestine | 1.77e-12 | 13 |
gastrointestinal system mucosa | 1.77e-12 | 13 |
peripheral nervous system | 3.47e-09 | 11 |
organ component layer | 6.47e-09 | 24 |
epithelium of mucosa | 1.01e-08 | 9 |
gastrointestinal system epithelium | 1.01e-08 | 9 |
intestinal epithelium | 1.01e-08 | 9 |
simple columnar epithelium | 5.89e-07 | 11 |
ileal mucosa | 5.91e-07 | 3 |
ileum | 5.91e-07 | 3 |
mucosa of small intestine | 5.91e-07 | 3 |
wall of small intestine | 5.91e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.