Personal tools

FFCP PHASE1:Mm9::chr13:19403293..19403304,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=50|UniProt=|association_with_transcript=-113bp_to_uc007pou.1_5end|description=CAGE_peak_3_at_uc007pou.1_5end|id=chr13:19403293..19403304,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!8.17e-38!23;UBERON:0000974!8.17e-38!23;UBERON:0004807!8.17e-38!23;UBERON:0005058!8.17e-38!23;UBERON:0003351!8.17e-38!23;UBERON:0009113!8.17e-38!23;UBERON:0003295!8.17e-38!23;UBERON:0009722!8.17e-38!23;UBERON:0005562!8.17e-38!23;UBERON:0007690!8.17e-38!23;UBERON:0006562!3.41e-36!24;UBERON:0003408!3.41e-36!24;UBERON:0001557!3.41e-36!24;UBERON:0001042!3.41e-36!24;UBERON:0008814!3.41e-36!24;UBERON:0009145!3.41e-36!24;UBERON:0000072!4.73e-32!27;UBERON:0004177!9.16e-30!29;UBERON:0000063!1.82e-24!35;UBERON:0000065!1.04e-20!41;UBERON:0001004!3.44e-20!42;UBERON:0002390!9.22e-19!45;UBERON:0003061!9.22e-19!45;UBERON:0002193!1.64e-17!48;UBERON:0005057!2.09e-16!51;UBERON:0003929!4.03e-15!55;UBERON:0002368!9.41e-14!60;UBERON:0002530!1.36e-12!65;UBERON:0000490!2.21e-12!66;UBERON:0005911!8.74e-12!69;UBERON:0002405!1.35e-11!70;UBERON:0000949!3.09e-11!72;UBERON:0007811!3.51e-09!86;UBERON:0003081!6.12e-09!88;UBERON:0001041!1.73e-08!92;UBERON:0000153!2.81e-08!94;UBERON:0000077!5.63e-08!97;UBERON:0000064!8.73e-08!99|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1276770224903,12.5375898786689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,1.1298205288131,1.03936658382236,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,0.15241361331,0.403304740547362,0.194915761479505,0.481059208201647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@uc007pou.1}}
|EntrezGene=
|HGNC=
|MCL_coexpression_id=50
|UniProt=
|association_with_transcript=-113bp_to_uc007pou.1_5end
|description=CAGE_peak_3_at_uc007pou.1_5end
|id=chr13:19403293..19403304,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!8.17e-38!23;UBERON:0000974!8.17e-38!23;UBERON:0004807!8.17e-38!23;UBERON:0005058!8.17e-38!23;UBERON:0003351!8.17e-38!23;UBERON:0009113!8.17e-38!23;UBERON:0003295!8.17e-38!23;UBERON:0009722!8.17e-38!23;UBERON:0005562!8.17e-38!23;UBERON:0007690!8.17e-38!23;UBERON:0006562!3.41e-36!24;UBERON:0003408!3.41e-36!24;UBERON:0001557!3.41e-36!24;UBERON:0001042!3.41e-36!24;UBERON:0008814!3.41e-36!24;UBERON:0009145!3.41e-36!24;UBERON:0000072!4.73e-32!27;UBERON:0004177!9.16e-30!29;UBERON:0000063!1.82e-24!35;UBERON:0000065!1.04e-20!41;UBERON:0001004!3.44e-20!42;UBERON:0002390!9.22e-19!45;UBERON:0003061!9.22e-19!45;UBERON:0002193!1.64e-17!48;UBERON:0005057!2.09e-16!51;UBERON:0003929!4.03e-15!55;UBERON:0002368!9.41e-14!60;UBERON:0002530!1.36e-12!65;UBERON:0000490!2.21e-12!66;UBERON:0005911!8.74e-12!69;UBERON:0002405!1.35e-11!70;UBERON:0000949!3.09e-11!72;UBERON:0007811!3.51e-09!86;UBERON:0003081!6.12e-09!88;UBERON:0001041!1.73e-08!92;UBERON:0000153!2.81e-08!94;UBERON:0000077!5.63e-08!97;UBERON:0000064!8.73e-08!99
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1276770224903,12.5375898786689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,1.1298205288131,1.03936658382236,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.302899349844443,0.15241361331,0.403304740547362,0.194915761479505,0.481059208201647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p3@uc007pou.1
}}

Revision as of 00:05, 13 September 2013

Short description:p3@uc007pou.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_uc007pou.1_5end
Coexpression cluster:MCL_coexpression_mm9:50
Association with transcript: -113bp_to_uc007pou.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:19403293..19403304,-&oldid=2909206"