FFCP PHASE1:Mm9::chr13:19434023..19434030,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=50|UniProt=|association_with_transcript=2bp_to_ENSMUST00000103565_5end|description=CAGE_peak_1_at_ENSMUST00000103565_5end|id=chr13:19434023..19434030,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.97e-16!29;UBERON:0002370!1.95e-15!23;UBERON:0000974!1.95e-15!23;UBERON:0004807!1.95e-15!23;UBERON:0005058!1.95e-15!23;UBERON:0003351!1.95e-15!23;UBERON:0009113!1.95e-15!23;UBERON:0003295!1.95e-15!23;UBERON:0009722!1.95e-15!23;UBERON:0005562!1.95e-15!23;UBERON:0007690!1.95e-15!23;UBERON:0002193!3.18e-15!48;UBERON:0006562!1.08e-14!24;UBERON:0003408!1.08e-14!24;UBERON:0001557!1.08e-14!24;UBERON:0001042!1.08e-14!24;UBERON:0008814!1.08e-14!24;UBERON:0009145!1.08e-14!24;UBERON:0000072!8.66e-13!27;UBERON:0002390!5.98e-11!45;UBERON:0003061!5.98e-11!45;UBERON:0000331!5.08e-10!3;UBERON:0002116!5.08e-10!3;UBERON:0001204!5.08e-10!3;UBERON:0001168!5.08e-10!3;UBERON:0000064!1.97e-09!99;UBERON:0000063!2.57e-09!35;UBERON:0002405!3.16e-09!70;UBERON:0002465!4.19e-09!3;UBERON:0005057!5.51e-08!51;UBERON:0000065!1.31e-07!41;UBERON:0001004!2.26e-07!42;UBERON:0001007!4.52e-07!128;UBERON:0001555!4.52e-07!128;UBERON:0007026!4.52e-07!128;UBERON:0004119!6.90e-07!130;UBERON:0000925!6.90e-07!130;UBERON:0006595!6.90e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000331,1.88e-08,3;UBERON:0002116,1.88e-08,3;UBERON:0001204,1.88e-08,3;UBERON:0001168,1.88e-08,3;UBERON:0001242,1.13e-07,13;UBERON:0001262,1.13e-07,13;UBERON:0004786,1.13e-07,13;UBERON:0000344,8.85e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,3.47518329203099,6.52999472847338,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,1.00812051903972,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.32167513193519,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.924398614483445,0.129920822977795,0.358053391334963,0.596044064343795,0.120195449519969,0.443068581523732,0.201932899896295,0.0762068066549998,0.302478555410522,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103565}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENSMUST00000103565_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103565_5end | |||
|id=chr13:19434023..19434030,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0000838,2.25e-08,12;CL:0000542,8.31e-08,13;CL:0000051,8.31e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.97e-16!29;UBERON:0002370!1.95e-15!23;UBERON:0000974!1.95e-15!23;UBERON:0004807!1.95e-15!23;UBERON:0005058!1.95e-15!23;UBERON:0003351!1.95e-15!23;UBERON:0009113!1.95e-15!23;UBERON:0003295!1.95e-15!23;UBERON:0009722!1.95e-15!23;UBERON:0005562!1.95e-15!23;UBERON:0007690!1.95e-15!23;UBERON:0002193!3.18e-15!48;UBERON:0006562!1.08e-14!24;UBERON:0003408!1.08e-14!24;UBERON:0001557!1.08e-14!24;UBERON:0001042!1.08e-14!24;UBERON:0008814!1.08e-14!24;UBERON:0009145!1.08e-14!24;UBERON:0000072!8.66e-13!27;UBERON:0002390!5.98e-11!45;UBERON:0003061!5.98e-11!45;UBERON:0000331!5.08e-10!3;UBERON:0002116!5.08e-10!3;UBERON:0001204!5.08e-10!3;UBERON:0001168!5.08e-10!3;UBERON:0000064!1.97e-09!99;UBERON:0000063!2.57e-09!35;UBERON:0002405!3.16e-09!70;UBERON:0002465!4.19e-09!3;UBERON:0005057!5.51e-08!51;UBERON:0000065!1.31e-07!41;UBERON:0001004!2.26e-07!42;UBERON:0001007!4.52e-07!128;UBERON:0001555!4.52e-07!128;UBERON:0007026!4.52e-07!128;UBERON:0004119!6.90e-07!130;UBERON:0000925!6.90e-07!130;UBERON:0006595!6.90e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,1.88e-08,3;UBERON:0002116,1.88e-08,3;UBERON:0001204,1.88e-08,3;UBERON:0001168,1.88e-08,3;UBERON:0001242,1.13e-07,13;UBERON:0001262,1.13e-07,13;UBERON:0004786,1.13e-07,13;UBERON:0000344,8.85e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,3.47518329203099,6.52999472847338,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,1.00812051903972,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,1.32167513193519,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.924398614483445,0.129920822977795,0.358053391334963,0.596044064343795,0.120195449519969,0.443068581523732,0.201932899896295,0.0762068066549998,0.302478555410522,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103565 | |||
}} |
Revision as of 00:05, 13 September 2013
Short description: | p1@ENSMUST00000103565 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103565_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | 2bp_to_ENSMUST00000103565_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.82e-09 | 11 |
pro-T cell | 4.82e-09 | 11 |
lymphoid lineage restricted progenitor cell | 2.25e-08 | 12 |
lymphocyte | 8.31e-08 | 13 |
common lymphoid progenitor | 8.31e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 1.88e-08 | 3 |
ileum | 1.88e-08 | 3 |
mucosa of small intestine | 1.88e-08 | 3 |
wall of small intestine | 1.88e-08 | 3 |
intestinal mucosa | 1.13e-07 | 13 |
wall of intestine | 1.13e-07 | 13 |
gastrointestinal system mucosa | 1.13e-07 | 13 |
mucosa | 8.85e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.