FFCP PHASE1:Hg19::chr3:42907129..42907136,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C50|description=CAGE_peak_at_chr3:42907129..42907136,+|id=chr3:42907129..42907136,+|ontology_enrichment_celltype=CL:0002541!5.54e-09!3|ontology_enrichment_celltype_v019=CL:0002541;2.48e-36;3!CL:0000349;4.65e-22;19!CL:0002581;5.70e-13;1!CL:0002616;5.70e-13;1!CL:0002537;2.09e-10;5!CL:0000136;1.25e-08;13!CL:0000039;1.42e-07;7!CL:0000586;1.42e-07;7!CL:0002617;4.04e-07;2|ontology_enrichment_celltype_v019_2=CL:0002541,4.81e-36,3;CL:0000349,5.30e-22,19;CL:0002616,3.33e-13,1;CL:0002581,4.23e-13,1;CL:0002537,2.47e-10,5;CL:0000136,1.53e-07,15;CL:0000039,1.57e-07,7;CL:0000586,1.57e-07,7;CL:0002617,4.17e-07,2|ontology_enrichment_development_v019=UBERON:0003124;5.70e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:178;5.70e-13;1!DOID:326;5.70e-13;1!DOID:3978;5.70e-13;1!DOID:3394;5.70e-13;1!DOID:5844;5.70e-13;1!DOID:114;4.04e-07;2|ontology_enrichment_disease_v019_2=DOID:178,4.77e-13,1;DOID:326,4.77e-13,1;DOID:3978,4.77e-13,1;DOID:3394,4.77e-13,1;DOID:5844,4.77e-13,1;DOID:114,3.70e-07,2|ontology_enrichment_uberon=UBERON:0005631!4.48e-11!14;UBERON:0000158!4.48e-11!14;UBERON:0003124!1.01e-09!7;UBERON:0000476!5.54e-09!3;UBERON:0000920!5.54e-09!3;UBERON:0009569!4.81e-08!113;UBERON:0004923!2.41e-07!57|ontology_enrichment_uberon_v019=UBERON:0003124;2.48e-36;3!UBERON:0000920;2.48e-36;3!UBERON:0005631;1.37e-29;10!UBERON:0000158;1.37e-29;10!UBERON:0005406;3.75e-24;2!UBERON:0000478;1.89e-23;24!UBERON:0001987;1.39e-12;4!UBERON:0000305;1.11e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0003124,4.57e-42,7;UBERON:0005631,1.59e-40,14;UBERON:0000158,1.59e-40,14;UBERON:0000920,4.81e-36,3;UBERON:0005406,1.64e-24,2;UBERON:0000478,1.89e-23,24;UBERON:0001987,8.17e-13,4;UBERON:0004340,8.17e-13,4;UBERON:0004923,1.53e-10,66;UBERON:0000305,1.25e-07,7;UBERON:0004871,8.85e-07,8|phase1_expression=1.2717486548939,0.214100523890983,1.12763523276777,0,0.446961094427288,1.74467704820074,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81434175997808,0.496215615637554,0,0.561320188866147,0.512556597022804,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0.219259876645935,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,2.14870036263921,1.18785872333055,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.16684937732704,1.3037684630641,4.46601623624687,1.09917112082235,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,2.2562765983567,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,1.39775300349294,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr3:42907129..42907136,+ | |||
|id=chr3:42907129..42907136,+ | |||
|ontology_enrichment_celltype=CL:0002541!5.54e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.48e-36;3!CL:0000349;4.65e-22;19!CL:0002581;5.70e-13;1!CL:0002616;5.70e-13;1!CL:0002537;2.09e-10;5!CL:0000136;1.25e-08;13!CL:0000039;1.42e-07;7!CL:0000586;1.42e-07;7!CL:0002617;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.81e-36,3;CL:0000349,5.30e-22,19;CL:0002616,3.33e-13,1;CL:0002581,4.23e-13,1;CL:0002537,2.47e-10,5;CL:0000136,1.53e-07,15;CL:0000039,1.57e-07,7;CL:0000586,1.57e-07,7;CL:0002617,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.70e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;5.70e-13;1!DOID:326;5.70e-13;1!DOID:3978;5.70e-13;1!DOID:3394;5.70e-13;1!DOID:5844;5.70e-13;1!DOID:114;4.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,4.77e-13,1;DOID:326,4.77e-13,1;DOID:3978,4.77e-13,1;DOID:3394,4.77e-13,1;DOID:5844,4.77e-13,1;DOID:114,3.70e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.48e-11!14;UBERON:0000158!4.48e-11!14;UBERON:0003124!1.01e-09!7;UBERON:0000476!5.54e-09!3;UBERON:0000920!5.54e-09!3;UBERON:0009569!4.81e-08!113;UBERON:0004923!2.41e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.48e-36;3!UBERON:0000920;2.48e-36;3!UBERON:0005631;1.37e-29;10!UBERON:0000158;1.37e-29;10!UBERON:0005406;3.75e-24;2!UBERON:0000478;1.89e-23;24!UBERON:0001987;1.39e-12;4!UBERON:0000305;1.11e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,4.57e-42,7;UBERON:0005631,1.59e-40,14;UBERON:0000158,1.59e-40,14;UBERON:0000920,4.81e-36,3;UBERON:0005406,1.64e-24,2;UBERON:0000478,1.89e-23,24;UBERON:0001987,8.17e-13,4;UBERON:0004340,8.17e-13,4;UBERON:0004923,1.53e-10,66;UBERON:0000305,1.25e-07,7;UBERON:0004871,8.85e-07,8 | |||
|phase1_expression=1.2717486548939,0.214100523890983,1.12763523276777,0,0.446961094427288,1.74467704820074,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81434175997808,0.496215615637554,0,0.561320188866147,0.512556597022804,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0.219259876645935,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0,0,0.443430153536676,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,2.14870036263921,1.18785872333055,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.16684937732704,1.3037684630641,4.46601623624687,1.09917112082235,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,2.2562765983567,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,1.39775300349294,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:42907129..42907136,+ | |||
}} |
Revision as of 00:10, 13 September 2013
Short description: | p@chr3:42907129..42907136, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:42907129..42907136, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.81e-36 | 3 |
extraembryonic cell | 5.30e-22 | 19 |
perirenal adipocyte cell | 3.33e-13 | 1 |
perirenal preadipocyte | 4.23e-13 | 1 |
amnion mesenchymal stem cell | 2.47e-10 | 5 |
fat cell | 1.53e-07 | 15 |
germ line cell | 1.57e-07 | 7 |
germ cell | 1.57e-07 | 7 |
adipocyte of breast | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 4.57e-42 | 7 |
extraembryonic membrane | 1.59e-40 | 14 |
membranous layer | 1.59e-40 | 14 |
egg chorion | 4.81e-36 | 3 |
perirenal fat | 1.64e-24 | 2 |
extraembryonic structure | 1.89e-23 | 24 |
placenta | 8.17e-13 | 4 |
allantois | 8.17e-13 | 4 |
organ component layer | 1.53e-10 | 66 |
amnion | 1.25e-07 | 7 |
somatic layer of lateral plate mesoderm | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.77e-13 | 1 |
ischemia | 4.77e-13 | 1 |
extrinsic cardiomyopathy | 4.77e-13 | 1 |
myocardial ischemia | 4.77e-13 | 1 |
myocardial infarction | 4.77e-13 | 1 |
heart disease | 3.70e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.