FFCP PHASE1:Hg19::chr4:119725898..119725901,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:119725898..119725901,-|id=chr4:119725898..119725901,-|ontology_enrichment_celltype=CL:0000763!4.54e-07!112;CL:0000049!4.54e-07!112|ontology_enrichment_celltype_v019=CL:0000123;1.57e-08;2!CL:0000242;1.57e-08;2|ontology_enrichment_celltype_v019_2=CL:0000242,9.94e-09,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!1.09e-18!235;DOID:14566!5.80e-18!239;DOID:0050687!4.82e-11!143;DOID:0050686!1.87e-09!137;DOID:305!1.97e-07!106|ontology_enrichment_disease_v019=DOID:3910;1.42e-09;2!DOID:3908;3.40e-08;5|ontology_enrichment_disease_v019_2=DOID:3910,1.47e-09,2;DOID:3908,3.52e-08,5|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0009856;7.74e-10;4!UBERON:0004903;1.42e-09;2!UBERON:0002173;1.42e-09;2!UBERON:0002186;1.42e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.47e-09,2;UBERON:0002173,1.47e-09,2;UBERON:0002186,1.47e-09,2|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.309868802321207,0,0.587200878669695,0,1.80490002723128,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0,0.674170453335254,0,0.962787081228281,1.27867425159808,0.659702600373432,0.199463657621632,0,1.16083695451434,0.56738522469114,1.86846674698672,0,1.0429658368404,0.65156653411535,0,1.47311054395026,0.316462387440884,0.211255286311942,0.425208599930087,0,0,0.300353785683013,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0.600182192168805,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0.167516265334349,1.91381625495949,0.749007023947182,5.9832291840805,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.686286847621712,0.206768026122887,0.431428401637234,0.426910231213777,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581051892299796,0,0,0.368323955743585,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.680374821106063,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0.522870902049801,0,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,1.71749864090389,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0,0,0,0,0.59873811429845,0,1.05836791361941,0.973865820823666,1.12318871245384,0,1.09675927041116,2.50634477090067,0,0.642352300414798,0.80719882876419,1.27753871307098,0.343505344755765,0.307240764308458,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,1.33228787199128,0,0,0,0.606802608747567,0.557216921387392,3.69376990848337,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,1.10513566212459,1.51159648712566,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,1.5625665665114,0.174919999992391,0,0.341380344856499,5.84783395673362,4.96414131712666,2.06846023944879,1.16641845353302,0.868124974666461,0,0,0,0.552896299656123,0.295547618953547,0.219385397153973,0.21787692703798,0.278847488557207,0.230850775511391,0,0,0,0.217294743844016,0.31900115973192,0,0,1.02193298195737,0.156980256395025,0.498635045700469,0.225595660617181,0,0.167821586975843,0,0.635746315921515,0.210998064528027,0,0,0,0,0,0,1.18608451472249,0.741383633679017,0,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0.789168805698781,2.41981432097328,0.30607276163049,0,0.450970258243478,0.207376382794494,0,0,1.2557316736289,0,0,0.138674673013139,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0.19351266257817,0.219267951258557,0.246346371159628,0,0.176512253383001,0.451961481561065,0.274083849293502,1.78843150532691,0,0,0.240476460754601,0,0,0.288180834308212,0.229073192331831,0.514784993585894,0,0,0.707082103850386,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,2.36598618851383,0,0.458320848023367,0,0,0,0,0,0.360299883542404,1.16495949527454,0.236349546921671,0.494495150286999,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0.449947783103001,0.77380195455795,0,0,0,0.0524545881349981,0.105600336519406,0.35857467866569,2.30298236783334,0,1.32418394073086,0,0.542999601753713,0,0,1.19730191562487,0.492555124496034,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0,0.171086837884329,0,0,0.157204305099666,0,0,1.38328142328561,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0,0.415045904808692,0.499921631848426,0.151649117541648,0.570930667089935,0,1.40500471742064,1.30428925749743,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.159296767163702,0.899606224327209,0,0,0,0.521745061811734,0.300515217994437,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0.680117776536817,0.926089897295336,0,0.358177682162975,0,0.219284049578707,0.176689145945881,1.15748422962549,0.844712203265363,0.256241518587947,0.690860683462397,0.607719912354764,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0.737318726261158,0.422624246717254,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0.327628914576042,0.169732529954025,0.637724760305049,0.619678821295011,0,0.318004350653419,0.157723490002507,0,0.352675943690684,0.3062454773532,0,0,0,0.41023272848151,2.26864526599546,0,0,0,0,0,0.183428598521679,0.231051332300676,0.762764190934334,0,0,0,0.60511520611056,0,2.3571602503328,0.655087670040387,0,0.135075169236789,0,0,0,0.546974809018219,0.548257766857182,0,2.11045493231545,0.511049710558381,0,0,0.606965604236632,0,0,0.921871900446234,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0.68732060563215,0,0,0.559277158988962,0,0.121917924982269,1.29485767437579,0,1.1598144313382,0,0.935757853848423,0.994753875806841,0.237840181555137,0.11294608203896,0.879524133963433,0.301925687133347,0,0,0,0,0.707029641304878,0.392616934229891,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0.883164973845552,0.655593431782173,0.380095503034311,0.203977659483963,0,0.918948995348449,1.75495277504663,0,0,0.829169439458779,0.103432995861895,0,0.714193294391221,0,0,1.00918676322552,0,0.404234377916439,0,0.684466602170562,0,0,0.332660356546013,0,0.106727345877715,1.9307228228694,0.898252021065869,0,0,0,0,0.402547587182052,0.320568492303233|short_description=p@chr4:119725898..119725901,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:119725898..119725901,- | |||
|id=chr4:119725898..119725901,- | |||
|ontology_enrichment_celltype=CL:0000763!4.54e-07!112;CL:0000049!4.54e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.57e-08;2!CL:0000242;1.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.94e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.09e-18!235;DOID:14566!5.80e-18!239;DOID:0050687!4.82e-11!143;DOID:0050686!1.87e-09!137;DOID:305!1.97e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.42e-09;2!DOID:3908;3.40e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.47e-09,2;DOID:3908,3.52e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0009856;7.74e-10;4!UBERON:0004903;1.42e-09;2!UBERON:0002173;1.42e-09;2!UBERON:0002186;1.42e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.47e-09,2;UBERON:0002173,1.47e-09,2;UBERON:0002186,1.47e-09,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.309868802321207,0,0.587200878669695,0,1.80490002723128,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0.645484683583826,1.35426486594342,0.376484679085209,0,0.674170453335254,0,0.962787081228281,1.27867425159808,0.659702600373432,0.199463657621632,0,1.16083695451434,0.56738522469114,1.86846674698672,0,1.0429658368404,0.65156653411535,0,1.47311054395026,0.316462387440884,0.211255286311942,0.425208599930087,0,0,0.300353785683013,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0.600182192168805,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0.167516265334349,1.91381625495949,0.749007023947182,5.9832291840805,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0.686286847621712,0.206768026122887,0.431428401637234,0.426910231213777,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581051892299796,0,0,0.368323955743585,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0.680374821106063,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0.522870902049801,0,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.460511024178389,0.275673144969061,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,1.71749864090389,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0,0,0,0,0.59873811429845,0,1.05836791361941,0.973865820823666,1.12318871245384,0,1.09675927041116,2.50634477090067,0,0.642352300414798,0.80719882876419,1.27753871307098,0.343505344755765,0.307240764308458,0,0.166849141711909,0.19538809540204,0.835218521685727,0,0,1.33228787199128,0,0,0,0.606802608747567,0.557216921387392,3.69376990848337,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,1.10513566212459,1.51159648712566,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,1.5625665665114,0.174919999992391,0,0.341380344856499,5.84783395673362,4.96414131712666,2.06846023944879,1.16641845353302,0.868124974666461,0,0,0,0.552896299656123,0.295547618953547,0.219385397153973,0.21787692703798,0.278847488557207,0.230850775511391,0,0,0,0.217294743844016,0.31900115973192,0,0,1.02193298195737,0.156980256395025,0.498635045700469,0.225595660617181,0,0.167821586975843,0,0.635746315921515,0.210998064528027,0,0,0,0,0,0,1.18608451472249,0.741383633679017,0,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0.242780379534093,0.789168805698781,2.41981432097328,0.30607276163049,0,0.450970258243478,0.207376382794494,0,0,1.2557316736289,0,0,0.138674673013139,0.520679215005393,0,0,0.17472666824203,0.171986032471617,0.19351266257817,0.219267951258557,0.246346371159628,0,0.176512253383001,0.451961481561065,0.274083849293502,1.78843150532691,0,0,0.240476460754601,0,0,0.288180834308212,0.229073192331831,0.514784993585894,0,0,0.707082103850386,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,2.36598618851383,0,0.458320848023367,0,0,0,0,0,0.360299883542404,1.16495949527454,0.236349546921671,0.494495150286999,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0.449947783103001,0.77380195455795,0,0,0,0.0524545881349981,0.105600336519406,0.35857467866569,2.30298236783334,0,1.32418394073086,0,0.542999601753713,0,0,1.19730191562487,0.492555124496034,0.170388021785422,0.113312091520126,0,0,0.258565912723101,0,0.171086837884329,0,0,0.157204305099666,0,0,1.38328142328561,0,1.27668251554036,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0,0.415045904808692,0.499921631848426,0.151649117541648,0.570930667089935,0,1.40500471742064,1.30428925749743,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.159296767163702,0.899606224327209,0,0,0,0.521745061811734,0.300515217994437,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0.680117776536817,0.926089897295336,0,0.358177682162975,0,0.219284049578707,0.176689145945881,1.15748422962549,0.844712203265363,0.256241518587947,0.690860683462397,0.607719912354764,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0.737318726261158,0.422624246717254,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0,0,0.327628914576042,0.169732529954025,0.637724760305049,0.619678821295011,0,0.318004350653419,0.157723490002507,0,0.352675943690684,0.3062454773532,0,0,0,0.41023272848151,2.26864526599546,0,0,0,0,0,0.183428598521679,0.231051332300676,0.762764190934334,0,0,0,0.60511520611056,0,2.3571602503328,0.655087670040387,0,0.135075169236789,0,0,0,0.546974809018219,0.548257766857182,0,2.11045493231545,0.511049710558381,0,0,0.606965604236632,0,0,0.921871900446234,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0,0,0.846774100381858,0.68732060563215,0,0,0.559277158988962,0,0.121917924982269,1.29485767437579,0,1.1598144313382,0,0.935757853848423,0.994753875806841,0.237840181555137,0.11294608203896,0.879524133963433,0.301925687133347,0,0,0,0,0.707029641304878,0.392616934229891,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0.883164973845552,0.655593431782173,0.380095503034311,0.203977659483963,0,0.918948995348449,1.75495277504663,0,0,0.829169439458779,0.103432995861895,0,0.714193294391221,0,0,1.00918676322552,0,0.404234377916439,0,0.684466602170562,0,0,0.332660356546013,0,0.106727345877715,1.9307228228694,0.898252021065869,0,0,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p@chr4:119725898..119725901,- | |||
}} |
Revision as of 02:11, 13 September 2013
Short description: | p@chr4:119725898..119725901, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119725898..119725901, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.47e-09 | 2 |
alveolar duct | 1.47e-09 | 2 |
bronchiole | 1.47e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.47e-09 | 2 |
non-small cell lung carcinoma | 3.52e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.