FFCP PHASE1:Hg19::chr4:162563953..162563962,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:162563953..162563962,-|id=chr4:162563953..162563962,-|ontology_enrichment_celltype=CL:0002618!1.26e-22!3;CL:0002543!6.16e-20!6;CL:0002574!6.03e-09!1;CL:0002139!1.54e-07!24;CL:0000115!4.13e-07!35;CL:0000071!9.90e-07!18;CL:0002546!9.90e-07!18|ontology_enrichment_celltype_v019=CL:0002574;3.34e-66;1!CL:0002543;1.09e-44;6!CL:0002618;2.62e-23;3!CL:0000071;8.72e-16;18!CL:0002139;3.86e-12;24!CL:0000115;4.38e-07;36|ontology_enrichment_celltype_v019_2=CL:0002574,2.39e-66,1;CL:0002543,1.22e-44,6;CL:0002618,2.62e-23,3;CL:0000071,9.05e-16,18;CL:0002546,9.05e-16,18;CL:0002139,3.97e-12,24;CL:0000115,1.85e-08,36;CL:0002078,5.58e-07,45|ontology_enrichment_development_v019=CL:0002546;8.72e-16;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002066!8.25e-14!5;UBERON:0001638!2.34e-13!9;UBERON:0003920!2.34e-13!9;UBERON:0004582!2.34e-13!9;UBERON:0005418!7.01e-09!1;UBERON:0001389!7.01e-09!1;UBERON:0000026!7.01e-09!1;UBERON:0008784!7.01e-09!1;UBERON:0006058!7.01e-09!1;UBERON:0003663!7.01e-09!1;UBERON:0001383!7.01e-09!1;UBERON:0004256!7.01e-09!1;UBERON:0002529!7.01e-09!1;UBERON:0004708!7.01e-09!1;UBERON:0002101!7.01e-09!1;UBERON:0004709!7.01e-09!1;UBERON:0003661!7.01e-09!1;UBERON:0002471!7.01e-09!1;UBERON:0004357!7.01e-09!1;UBERON:0009872!7.01e-09!1;UBERON:0004347!7.01e-09!1;UBERON:0005420!7.01e-09!1;UBERON:0005732!7.01e-09!1;UBERON:0006057!7.01e-09!1;UBERON:0000978!7.01e-09!1;UBERON:0002103!7.01e-09!1;UBERON:0001665!7.01e-09!1;UBERON:0003823!7.01e-09!1;UBERON:0000154!7.01e-09!1;UBERON:0005733!7.01e-09!1;UBERON:0005730!7.01e-09!1;UBERON:0002902!3.28e-08!1;UBERON:0009899!3.28e-08!1;UBERON:0002336!3.53e-08!1;UBERON:0001018!3.53e-08!1;UBERON:0002473!3.53e-08!1;UBERON:0005340!3.53e-08!1;UBERON:0002316!3.53e-08!1;UBERON:0003544!3.53e-08!1;UBERON:0001020!3.53e-08!1;UBERON:0005970!3.53e-08!1;UBERON:0002437!3.53e-08!1;UBERON:0001882!3.79e-08!1;UBERON:0005403!3.79e-08!1;UBERON:0001986!9.90e-07!18;UBERON:0004638!9.90e-07!18;UBERON:0004852!9.90e-07!18|ontology_enrichment_uberon_v019=UBERON:0001638;2.87e-30;9!UBERON:0003920;2.87e-30;9!UBERON:0004582;2.87e-30;9!UBERON:0004638;8.72e-16;18!UBERON:0001986;8.72e-16;18!UBERON:0004852;8.72e-16;18!UBERON:0002066;1.40e-14;5!UBERON:0000487;3.89e-13;22!UBERON:0006914;1.06e-11;25!UBERON:0000490;2.74e-09;33!UBERON:0010260;1.04e-08;9!UBERON:0001264;6.34e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0001638,3.09e-30,9;UBERON:0003920,3.09e-30,9;UBERON:0004582,3.09e-30,9;UBERON:0004638,9.05e-16,18;UBERON:0001986,9.05e-16,18;UBERON:0004852,9.05e-16,18;UBERON:0002066,1.40e-14,5;UBERON:0000487,4.01e-13,22;UBERON:0006914,1.09e-11,25;UBERON:0010260,1.04e-08,9;UBERON:0001264,6.13e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76829157680647,0.22452937262617,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82455590382974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:162563953..162563962,- | |||
|id=chr4:162563953..162563962,- | |||
|ontology_enrichment_celltype=CL:0002618!1.26e-22!3;CL:0002543!6.16e-20!6;CL:0002574!6.03e-09!1;CL:0002139!1.54e-07!24;CL:0000115!4.13e-07!35;CL:0000071!9.90e-07!18;CL:0002546!9.90e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002574;3.34e-66;1!CL:0002543;1.09e-44;6!CL:0002618;2.62e-23;3!CL:0000071;8.72e-16;18!CL:0002139;3.86e-12;24!CL:0000115;4.38e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002574,2.39e-66,1;CL:0002543,1.22e-44,6;CL:0002618,2.62e-23,3;CL:0000071,9.05e-16,18;CL:0002546,9.05e-16,18;CL:0002139,3.97e-12,24;CL:0000115,1.85e-08,36;CL:0002078,5.58e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;8.72e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001638;2.87e-30;9!UBERON:0003920;2.87e-30;9!UBERON:0004582;2.87e-30;9!UBERON:0004638;8.72e-16;18!UBERON:0001986;8.72e-16;18!UBERON:0004852;8.72e-16;18!UBERON:0002066;1.40e-14;5!UBERON:0000487;3.89e-13;22!UBERON:0006914;1.06e-11;25!UBERON:0000490;2.74e-09;33!UBERON:0010260;1.04e-08;9!UBERON:0001264;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,3.09e-30,9;UBERON:0003920,3.09e-30,9;UBERON:0004582,3.09e-30,9;UBERON:0004638,9.05e-16,18;UBERON:0001986,9.05e-16,18;UBERON:0004852,9.05e-16,18;UBERON:0002066,1.40e-14,5;UBERON:0000487,4.01e-13,22;UBERON:0006914,1.09e-11,25;UBERON:0010260,1.04e-08,9;UBERON:0001264,6.13e-08,10 | |||
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|short_description=p@chr4:162563953..162563962,- | |||
}} |
Revision as of 03:09, 13 September 2013
Short description: | p@chr4:162563953..162563962, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:162563953..162563962, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell of pancreas | 2.39e-66 | 1 |
vein endothelial cell | 1.22e-44 | 6 |
endothelial cell of umbilical vein | 2.62e-23 | 3 |
blood vessel endothelial cell | 9.05e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.05e-16 | 18 |
endothelial cell of vascular tree | 3.97e-12 | 24 |
endothelial cell | 1.85e-08 | 36 |
meso-epithelial cell | 5.58e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
vein | 3.09e-30 | 9 |
venous blood vessel | 3.09e-30 | 9 |
venous system | 3.09e-30 | 9 |
blood vessel endothelium | 9.05e-16 | 18 |
endothelium | 9.05e-16 | 18 |
cardiovascular system endothelium | 9.05e-16 | 18 |
umbilical vein | 1.40e-14 | 5 |
simple squamous epithelium | 4.01e-13 | 22 |
squamous epithelium | 1.09e-11 | 25 |
umbilical blood vessel | 1.04e-08 | 9 |
pancreas | 6.13e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.