FFCP PHASE1:Hg19::chr4:16888915..16888925,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:16888915..16888925,-|id=chr4:16888915..16888925,-|ontology_enrichment_celltype=CL:0005020!8.45e-08!6;CL:0002138!8.45e-08!6;CL:0005022!8.45e-08!6;CL:0002139!2.33e-07!24|ontology_enrichment_celltype_v019=CL:0002618;8.83e-16;3!CL:0000540;7.61e-13;6!CL:0000404;7.61e-13;6!CL:0002138;7.61e-13;6!CL:0002139;1.09e-11;24!CL:0000115;2.22e-10;36!CL:0002543;4.11e-08;6|ontology_enrichment_celltype_v019_2=CL:0002618,6.31e-16,3;CL:0000540,9.26e-13,6;CL:0000031,9.26e-13,6;CL:0000404,9.26e-13,6;CL:0005020,9.26e-13,6;CL:0002138,9.26e-13,6;CL:0005022,9.26e-13,6;CL:0002139,9.49e-12,24;CL:0000115,1.61e-11,36;CL:0000047,1.34e-09,8;CL:0002078,7.54e-09,45;CL:0002543,3.49e-08,6;CL:0000213,6.63e-08,58;CL:0000215,6.63e-08,58|ontology_enrichment_development_v019=CL:0000031;7.61e-13;6!CL:0005022;7.61e-13;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;5.94e-08;10|ontology_enrichment_disease_v019_2=DOID:171,4.69e-08,10|ontology_enrichment_uberon=UBERON:0007023!2.37e-10!115;UBERON:0001869!3.21e-10!32;UBERON:0001893!2.89e-09!34;UBERON:0002020!2.92e-09!34;UBERON:0003528!2.92e-09!34;UBERON:0002780!3.14e-09!41;UBERON:0001890!3.14e-09!41;UBERON:0006240!3.14e-09!41;UBERON:0000073!6.88e-09!94;UBERON:0001016!6.88e-09!94;UBERON:0003080!7.52e-09!42;UBERON:0002791!7.81e-09!33;UBERON:0000956!1.41e-08!25;UBERON:0000203!1.41e-08!25;UBERON:0001017!2.65e-08!82;UBERON:0002619!5.13e-08!22;UBERON:0005743!5.41e-08!86;UBERON:0001950!5.58e-08!20;UBERON:0000468!2.44e-07!659|ontology_enrichment_uberon_v019=UBERON:0002050;4.16e-16;5!UBERON:0005423;4.16e-16;5!UBERON:0002346;1.18e-11;4!UBERON:0000923;1.18e-11;4!UBERON:0010316;1.18e-11;4!UBERON:0005291;1.18e-11;4!UBERON:0000922;1.60e-11;49!UBERON:0001473;1.16e-09;8!UBERON:0004536;1.16e-09;8!UBERON:0006558;1.16e-09;8!UBERON:0002066;1.18e-09;5!UBERON:0002465;9.56e-08;10!UBERON:0002114;1.39e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002066,9.69e-10,5;UBERON:0001473,1.34e-09,8;UBERON:0004536,1.34e-09,8;UBERON:0006558,1.34e-09,8;UBERON:0002465,1.07e-07,10;UBERON:0002114,1.49e-07,2|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.550236083880135,0,1.29208379584664,1.06729878806013,0.66944122552934,0,0,0,0.367663080345869,1.62028389576352,3.66128885964727,4.4905874525234,1.57656072676651,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,1.06748995729705,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0.491337269247072,0.103325781175765,0,0,0,0,0,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0,0,0.18611685633159,0.843881661206331,0.292311015483596,0.252433774244115,0.0920498986422993,0.80823028409406,0.710019185033229,0.10075209822764,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,1.38895653772983,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0.415941723061614,1.60586089917446,1.41932173530541,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0,0.728364672026868,0,0,0,0,0,0,0,0.510281115829547,1.0795795805107,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0.290033387828457,0.255679882248303,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.272999822815972,0.707027159768564,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0.422215270595328,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,4.08246458736556,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,0,0,0,1.2558420511602,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,1.18375320854817,1.20990716048664,1.83643656978294,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:16888915..16888925,- | |||
|id=chr4:16888915..16888925,- | |||
|ontology_enrichment_celltype=CL:0005020!8.45e-08!6;CL:0002138!8.45e-08!6;CL:0005022!8.45e-08!6;CL:0002139!2.33e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002618;8.83e-16;3!CL:0000540;7.61e-13;6!CL:0000404;7.61e-13;6!CL:0002138;7.61e-13;6!CL:0002139;1.09e-11;24!CL:0000115;2.22e-10;36!CL:0002543;4.11e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,6.31e-16,3;CL:0000540,9.26e-13,6;CL:0000031,9.26e-13,6;CL:0000404,9.26e-13,6;CL:0005020,9.26e-13,6;CL:0002138,9.26e-13,6;CL:0005022,9.26e-13,6;CL:0002139,9.49e-12,24;CL:0000115,1.61e-11,36;CL:0000047,1.34e-09,8;CL:0002078,7.54e-09,45;CL:0002543,3.49e-08,6;CL:0000213,6.63e-08,58;CL:0000215,6.63e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000031;7.61e-13;6!CL:0005022;7.61e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;5.94e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.69e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.37e-10!115;UBERON:0001869!3.21e-10!32;UBERON:0001893!2.89e-09!34;UBERON:0002020!2.92e-09!34;UBERON:0003528!2.92e-09!34;UBERON:0002780!3.14e-09!41;UBERON:0001890!3.14e-09!41;UBERON:0006240!3.14e-09!41;UBERON:0000073!6.88e-09!94;UBERON:0001016!6.88e-09!94;UBERON:0003080!7.52e-09!42;UBERON:0002791!7.81e-09!33;UBERON:0000956!1.41e-08!25;UBERON:0000203!1.41e-08!25;UBERON:0001017!2.65e-08!82;UBERON:0002619!5.13e-08!22;UBERON:0005743!5.41e-08!86;UBERON:0001950!5.58e-08!20;UBERON:0000468!2.44e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;4.16e-16;5!UBERON:0005423;4.16e-16;5!UBERON:0002346;1.18e-11;4!UBERON:0000923;1.18e-11;4!UBERON:0010316;1.18e-11;4!UBERON:0005291;1.18e-11;4!UBERON:0000922;1.60e-11;49!UBERON:0001473;1.16e-09;8!UBERON:0004536;1.16e-09;8!UBERON:0006558;1.16e-09;8!UBERON:0002066;1.18e-09;5!UBERON:0002465;9.56e-08;10!UBERON:0002114;1.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,9.69e-10,5;UBERON:0001473,1.34e-09,8;UBERON:0004536,1.34e-09,8;UBERON:0006558,1.34e-09,8;UBERON:0002465,1.07e-07,10;UBERON:0002114,1.49e-07,2 | |||
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|short_description=p@chr4:16888915..16888925,- | |||
}} |
Revision as of 03:15, 13 September 2013
Short description: | p@chr4:16888915..16888925, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:16888915..16888925, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 6.31e-16 | 3 |
neuron | 9.26e-13 | 6 |
neuroblast | 9.26e-13 | 6 |
electrically signaling cell | 9.26e-13 | 6 |
lymphangioblast | 9.26e-13 | 6 |
endothelial cell of lymphatic vessel | 9.26e-13 | 6 |
vascular lymphangioblast | 9.26e-13 | 6 |
endothelial cell of vascular tree | 9.49e-12 | 24 |
endothelial cell | 1.61e-11 | 36 |
neuronal stem cell | 1.34e-09 | 8 |
meso-epithelial cell | 7.54e-09 | 45 |
vein endothelial cell | 3.49e-08 | 6 |
lining cell | 6.63e-08 | 58 |
barrier cell | 6.63e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 9.69e-10 | 5 |
lymphatic vessel | 1.34e-09 | 8 |
lymph vasculature | 1.34e-09 | 8 |
lymphatic part of lymphoid system | 1.34e-09 | 8 |
lymphoid system | 1.07e-07 | 10 |
duodenum | 1.49e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.69e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.