FFCP PHASE1:Hg19::chr4:4543700..4543759,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=53407|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15942|TSSclassifier=S|UniProt=Q9P2W9,D6RF48|association_with_transcript=0bp_to_ENST00000306200,ENST00000505286,ENST00000512780_5end|description=CAGE_peak_1_at_STX18_5end|id=chr4:4543700..4543759,-|ontology_enrichment_celltype=CL:0000057!7.06e-13!75;CL:0002620!1.33e-09!23;CL:0000048!1.53e-07!430;CL:0000134!4.14e-07!358;CL:0000723!8.87e-07!436|ontology_enrichment_celltype_v019=CL:0002620;1.47e-09;23|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-12,76;CL:0002620,1.33e-09,23;CL:0000048,2.98e-08,427;CL:0000839,8.22e-08,66;CL:0000134,9.14e-08,354;CL:0000473,1.65e-07,48;CL:0000234,1.65e-07,48;CL:0000723,1.91e-07,433;CL:0002320,2.98e-07,361;CL:0002194,9.34e-07,59;CL:0000576,9.34e-07,59;CL:0000040,9.34e-07,59;CL:0000559,9.34e-07,59;CL:0000219,9.73e-07,386|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.36e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.89e-08,371|phase1_expression=19.4395865819496,21.6241529129893,20.4383885939158,25.0183245882826,23.6889380046463,20.9361245784089,10.1319951267324,19.5833160762318,20.6336646277872,16.4641737456011,6.28021051175185,17.693751142544,17.4086205630779,18.1936538851269,21.5408294223145,22.1867298329086,16.2727522566474,12.4152715365853,22.9328415431538,20.4380956407468,12.2400414746552,16.9265549598167,18.3191031763876,14.9193123329444,19.3335664975996,28.7314405612297,31.2803245804293,32.2714203386085,16.521299627654,25.332740274416,21.8290733875667,19.3078457140575,10.2410012384605,12.9413903558376,22.3105537671269,30.2820465198208,21.4328320714438,30.4697474692533,26.4718670660587,23.2201631665961,27.3176878572708,28.1787489436512,30.9090681161024,28.7888512783538,44.9672372989683,37.6005294841115,23.2429036905685,30.8375916016369,29.4221052350348,17.8369283239733,22.2859814680318,22.9387762991928,24.1321976515633,30.3377801284398,35.2108865145289,22.2125960660274,33.567456457115,29.4387764623061,23.5684597125595,38.1905542220551,32.6061934157511,21.1104832119498,32.3131125347044,35.8028790447463,16.8321358404579,36.3126543802329,24.912889959823,20.8536392163097,23.4667313289091,27.3657944328447,13.3187890579341,31.303599058943,27.8486900947978,17.3229334775792,23.1738686961897,20.3368886143125,18.3095668768787,21.1749418906524,25.7160938715328,18.8108410869224,19.2949176883117,20.0930569141097,17.5996244461323,22.3916830617474,22.2377313465889,17.9226693477933,25.2249471832688,22.9900975981793,23.1365705474702,17.1729675816366,16.507176104174,16.4426413023863,12.6150165281326,11.8954195721123,34.1910223418737,16.8565814256049,17.703879310245,18.8645166119599,13.1584959359686,14.7124115943797,12.3850461320764,13.7299863663073,11.6896037044747,12.812202541795,11.4896303915187,16.1719743046043,21.3935052374362,13.5776798909216,12.8758754084279,12.0039670360684,12.1594007825773,13.3309419438124,11.7146384898028,12.5744189202165,6.27213142829861,16.0899266630544,15.7120402376788,15.4632350467183,16.9523193653067,13.061181987288,21.4857539772618,19.0090408889675,23.0379932188992,20.9898042293246,16.240994451805,20.3628436757855,21.3493279199472,18.9510338631248,14.1743303765259,20.2754165435919,26.8187552945358,20.1210257911091,15.0877822975366,21.3249099906894,21.5575301573433,19.5542800597112,34.9925816702484,18.9787599418028,24.5790524626576,20.6208339640184,22.3978703517471,33.0067270254236,11.6574492253614,10.381964397964,21.4201279812091,19.8507900521165,18.0822826305657,50.5600123527325,45.7595928624102,60.1761152153895,23.0564392545378,11.1830497363796,26.7298186237848,18.0898541415683,19.7164735018656,18.4329088099845,19.0185419548498,23.2575083252396,24.1921058626963,24.0998841190563,19.7386365383482,19.0068026429628,14.399661395342,23.5304371421356,18.6332648012805,23.3965288104289,31.8831709129161,27.9276471598639,16.8648301212472,18.9853131913626,21.2514022959272,3.9534125230819,3.87780264148325,8.28578699070815,18.8849341644221,21.7804480063077,28.8652014172817,28.6836620748814,21.2801029319014,19.0630384048384,20.2823091886439,17.2667283892012,23.3408276549825,22.6313929077076,16.8365760206862,40.5637906088416,25.9279166016,31.6333932975625,19.9782449171405,33.6578374711225,26.1535190965652,27.479672682641,28.0040193756868,23.73618633268,34.9103632845867,24.5668634623536,39.9870773150212,34.4520828611796,33.6283023818837,23.6641954103887,12.9351265526923,32.6572061070888,37.2853189218453,41.0054890916591,36.4351425331095,29.4228283967059,35.0054677252371,19.3969033203636,45.9237467363487,37.5861004320679,29.8823980634982,27.608380839765,41.1179591661371,36.0696756063881,36.4789038409916,25.3164498361899,31.1798416515836,47.9624171063817,40.2258057066848,23.9236164091842,31.5958537339787,36.8752679513163,30.8600278005087,18.3597810505132,20.4559590443126,25.525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2,34.8988947209112,26.4024128425004,10.2411056985106,27.8394399990795,16.220723483287,17.397216470073,24.7712606460161,15.9078835154232,35.0153364284008,20.4542556137418,41.5641581903373,9.67476547359776,27.3242746855679,28.4772643418316,19.8889200058601,28.2190377816914,17.6506791662812,35.8228351594471,18.4529959088049,20.4962016225689,23.6687207446704,28.0379739234898,22.462156397185,27.7813497166118,23.9858774219829,32.4968168262297,21.5265871746572,14.764411470807,35.7864830240793,19.2666299029907,17.3440895613256,24.4545921399436,21.9612513316654,17.8903783039555,30.1545299093778,20.8317210173381,20.7979032884138,27.6880999759225,23.5931214441598,19.9955996693563,21.0319511678985,21.3156654160742,19.7740879896515,34.9200618232411,20.05660314339,43.8758662683606,57.6122879835784,25.7042526232222,19.3419702261744,20.0439942986922,20.9496699688092,21.314340245882,25.6368570041893,14.4650102728991,13.5568447132491,17.3820782504069,15.6756058485812,15.0582652477524,21.7547131237118,26.6806604060756,16.3003574707547,21.0020433016314,15.2620104605133,65.6445759775596,28.474589067788,11.7320471201727,39.9729522477973,30.1103171953646,15.9781625804523,17.5108200424193,19.234109538194|short_description=p1@STX18}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=53407 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15942 | |||
|TSSclassifier=S | |||
|UniProt=Q9P2W9,D6RF48 | |||
|association_with_transcript=0bp_to_ENST00000306200,ENST00000505286,ENST00000512780_5end | |||
|description=CAGE_peak_1_at_STX18_5end | |||
|id=chr4:4543700..4543759,- | |||
|ontology_enrichment_celltype=CL:0000057!7.06e-13!75;CL:0002620!1.33e-09!23;CL:0000048!1.53e-07!430;CL:0000134!4.14e-07!358;CL:0000723!8.87e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.47e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-12,76;CL:0002620,1.33e-09,23;CL:0000048,2.98e-08,427;CL:0000839,8.22e-08,66;CL:0000134,9.14e-08,354;CL:0000473,1.65e-07,48;CL:0000234,1.65e-07,48;CL:0000723,1.91e-07,433;CL:0002320,2.98e-07,361;CL:0002194,9.34e-07,59;CL:0000576,9.34e-07,59;CL:0000040,9.34e-07,59;CL:0000559,9.34e-07,59;CL:0000219,9.73e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.36e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.89e-08,371 | |||
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| |||
|short_description=p1@STX18 | |||
}} |
Revision as of 10:59, 13 September 2013
Short description: | p1@STX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_STX18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000306200, ENST00000505286, ENST00000512780_5end |
EntrezGene: | STX18 |
HGNC: | 15942 |
UniProt: | Q9P2W9D6RF48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-12 | 76 |
skin fibroblast | 1.33e-09 | 23 |
multi fate stem cell | 2.98e-08 | 427 |
myeloid lineage restricted progenitor cell | 8.22e-08 | 66 |
mesenchymal cell | 9.14e-08 | 354 |
defensive cell | 1.65e-07 | 48 |
phagocyte | 1.65e-07 | 48 |
somatic stem cell | 1.91e-07 | 433 |
connective tissue cell | 2.98e-07 | 361 |
monopoietic cell | 9.34e-07 | 59 |
monocyte | 9.34e-07 | 59 |
monoblast | 9.34e-07 | 59 |
promonocyte | 9.34e-07 | 59 |
motile cell | 9.73e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.89e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.