FFCP PHASE1:Mm9::chr16:48412521..48412534,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=433023|HGNC=|MCL_coexpression_id=74|UniProt=|association_with_transcript=0bp_to_NR_015373,uc007zjo.1_5end|description=CAGE_peak_1_at_Gm5485_5end|id=chr16:48412521..48412534,-|ontology_enrichment_celltype=CL:0002563!8.00e-11!9;CL:0002251!8.00e-11!9;CL:0000239!3.11e-08!6;CL:0000677!3.11e-08!6;CL:0000212!3.11e-08!6;CL:0000584!3.11e-08!6;CL:0000075!6.94e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,3.57e-14,9;CL:0002251,3.57e-14,9;CL:0000239,4.77e-13,6;CL:0000677,4.77e-13,6;CL:0000584,4.77e-13,6;CL:0000075,4.41e-11,7;CL:0000066,2.43e-08,25;CL:0002076,5.67e-08,15;CL:0000682,2.79e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.20e-25!59;UBERON:0000160!2.88e-22!43;UBERON:0000344!4.77e-18!15;UBERON:0001242!1.33e-15!13;UBERON:0000060!1.33e-15!13;UBERON:0001262!1.33e-15!13;UBERON:0004786!1.33e-15!13;UBERON:0003350!8.00e-11!9;UBERON:0004808!8.00e-11!9;UBERON:0001277!8.00e-11!9;UBERON:0004923!1.63e-09!24;UBERON:0000485!1.96e-08!11;UBERON:0001007!2.15e-08!128;UBERON:0001555!2.15e-08!128;UBERON:0007026!2.15e-08!128;UBERON:0004119!4.42e-08!130;UBERON:0000925!4.42e-08!130;UBERON:0006595!4.42e-08!130;UBERON:0004921!2.77e-07!126;UBERON:0004185!2.77e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.82e-45,31;UBERON:0005409,1.86e-40,47;UBERON:0000344,2.00e-26,15;UBERON:0001242,2.93e-22,13;UBERON:0001262,2.93e-22,13;UBERON:0004786,2.93e-22,13;UBERON:0004923,2.81e-15,24;UBERON:0001007,1.79e-14,116;UBERON:0001555,1.79e-14,116;UBERON:0007026,1.79e-14,116;UBERON:0003350,3.57e-14,9;UBERON:0004808,3.57e-14,9;UBERON:0001277,3.57e-14,9;UBERON:0004119,4.22e-14,118;UBERON:0000925,4.22e-14,118;UBERON:0006595,4.22e-14,118;UBERON:0004921,1.90e-12,114;UBERON:0000485,2.36e-11,11;UBERON:0002108,1.48e-09,4;UBERON:0000331,2.28e-07,3;UBERON:0002116,2.28e-07,3;UBERON:0001204,2.28e-07,3;UBERON:0001168,2.28e-07,3|phase1_expression=0,42.574999732002,35.4899406723838,73.8012675588665,71.1271936523813,4.8684988854448,10.0453435456076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,73.1165372165868,57.8111388289268,40.1962374880514,40.9223896351121,26.7184328530502,93.1114755336232,15.1218077855958,3.32595765982957,0,0,0,0.577703239502549,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5333315098814,0,0,0,0,0,0,0,0,0,0,13.7020655662872,0,0,0,0,0,0,0,0.376999773989026,0,0,0,0,0,0,96.9237158334235,0,0,82.0017147219578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,639.690763856633,143.596657698305,0,0,0.38660238396628,0.605050573870028,1.77902435075896,12.935342575654,91.1095798165462,92.7255115096181,59.3151092768636,48.5453791780408,55.5647648289492,69.2090944663751,117.579099131834,140.992021464092,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.7357318255851,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.324016022465404,0.209088296014469,1.31017538247707,0.404593039154462,1.90102948168273,1.30877970992015,85.2866524259997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.588795680537589,0,0.354951612318675,0,0.581385666529314,0.470546902076653,0.169229215783353,0.182927972872773,0.789209134313529,0.271608227691724,1.12228454331548,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,3.00819475667618,0,0,0|short_description=p1@Gm5485}} | ||
|EntrezGene=433023 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_015373,uc007zjo.1_5end | |||
|description=CAGE_peak_1_at_Gm5485_5end | |||
|id=chr16:48412521..48412534,- | |||
|ontology_enrichment_celltype=CL:0002563!8.00e-11!9;CL:0002251!8.00e-11!9;CL:0000239!3.11e-08!6;CL:0000677!3.11e-08!6;CL:0000212!3.11e-08!6;CL:0000584!3.11e-08!6;CL:0000075!6.94e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.57e-14,9;CL:0002251,3.57e-14,9;CL:0000239,4.77e-13,6;CL:0000677,4.77e-13,6;CL:0000584,4.77e-13,6;CL:0000075,4.41e-11,7;CL:0000066,2.43e-08,25;CL:0002076,5.67e-08,15;CL:0000682,2.79e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.20e-25!59;UBERON:0000160!2.88e-22!43;UBERON:0000344!4.77e-18!15;UBERON:0001242!1.33e-15!13;UBERON:0000060!1.33e-15!13;UBERON:0001262!1.33e-15!13;UBERON:0004786!1.33e-15!13;UBERON:0003350!8.00e-11!9;UBERON:0004808!8.00e-11!9;UBERON:0001277!8.00e-11!9;UBERON:0004923!1.63e-09!24;UBERON:0000485!1.96e-08!11;UBERON:0001007!2.15e-08!128;UBERON:0001555!2.15e-08!128;UBERON:0007026!2.15e-08!128;UBERON:0004119!4.42e-08!130;UBERON:0000925!4.42e-08!130;UBERON:0006595!4.42e-08!130;UBERON:0004921!2.77e-07!126;UBERON:0004185!2.77e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.82e-45,31;UBERON:0005409,1.86e-40,47;UBERON:0000344,2.00e-26,15;UBERON:0001242,2.93e-22,13;UBERON:0001262,2.93e-22,13;UBERON:0004786,2.93e-22,13;UBERON:0004923,2.81e-15,24;UBERON:0001007,1.79e-14,116;UBERON:0001555,1.79e-14,116;UBERON:0007026,1.79e-14,116;UBERON:0003350,3.57e-14,9;UBERON:0004808,3.57e-14,9;UBERON:0001277,3.57e-14,9;UBERON:0004119,4.22e-14,118;UBERON:0000925,4.22e-14,118;UBERON:0006595,4.22e-14,118;UBERON:0004921,1.90e-12,114;UBERON:0000485,2.36e-11,11;UBERON:0002108,1.48e-09,4;UBERON:0000331,2.28e-07,3;UBERON:0002116,2.28e-07,3;UBERON:0001204,2.28e-07,3;UBERON:0001168,2.28e-07,3 | |||
|phase1_expression=0,42.574999732002,35.4899406723838,73.8012675588665,71.1271936523813,4.8684988854448,10.0453435456076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,73.1165372165868,57.8111388289268,40.1962374880514,40.9223896351121,26.7184328530502,93.1114755336232,15.1218077855958,3.32595765982957,0,0,0,0.577703239502549,1.16364251750945,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5333315098814,0,0,0,0,0,0,0,0,0,0,13.7020655662872,0,0,0,0,0,0,0,0.376999773989026,0,0,0,0,0,0,96.9237158334235,0,0,82.0017147219578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,639.690763856633,143.596657698305,0,0,0.38660238396628,0.605050573870028,1.77902435075896,12.935342575654,91.1095798165462,92.7255115096181,59.3151092768636,48.5453791780408,55.5647648289492,69.2090944663751,117.579099131834,140.992021464092,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,87.7357318255851,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.324016022465404,0.209088296014469,1.31017538247707,0.404593039154462,1.90102948168273,1.30877970992015,85.2866524259997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0,0.320919209591815,0.505394423527595,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.463537303779422,0,0.412085900803307,0.588795680537589,0,0.354951612318675,0,0.581385666529314,0.470546902076653,0.169229215783353,0.182927972872773,0.789209134313529,0.271608227691724,1.12228454331548,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,3.00819475667618,0,0,0 | |||
|short_description=p1@Gm5485 | |||
}} |
Revision as of 12:49, 13 September 2013
Short description: | p1@Gm5485 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5485_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_NR_015373, uc007zjo.1_5end |
EntrezGene: | Gm5485 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.57e-14 | 9 |
epithelial cell of alimentary canal | 3.57e-14 | 9 |
brush border epithelial cell | 4.77e-13 | 6 |
gut absorptive cell | 4.77e-13 | 6 |
enterocyte | 4.77e-13 | 6 |
columnar/cuboidal epithelial cell | 4.41e-11 | 7 |
epithelial cell | 2.43e-08 | 25 |
endo-epithelial cell | 5.67e-08 | 15 |
M cell of gut | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.82e-45 | 31 |
gastrointestinal system | 1.86e-40 | 47 |
mucosa | 2.00e-26 | 15 |
intestinal mucosa | 2.93e-22 | 13 |
wall of intestine | 2.93e-22 | 13 |
gastrointestinal system mucosa | 2.93e-22 | 13 |
organ component layer | 2.81e-15 | 24 |
digestive system | 1.79e-14 | 116 |
digestive tract | 1.79e-14 | 116 |
primitive gut | 1.79e-14 | 116 |
epithelium of mucosa | 3.57e-14 | 9 |
gastrointestinal system epithelium | 3.57e-14 | 9 |
intestinal epithelium | 3.57e-14 | 9 |
endoderm-derived structure | 4.22e-14 | 118 |
endoderm | 4.22e-14 | 118 |
presumptive endoderm | 4.22e-14 | 118 |
subdivision of digestive tract | 1.90e-12 | 114 |
simple columnar epithelium | 2.36e-11 | 11 |
small intestine | 1.48e-09 | 4 |
ileal mucosa | 2.28e-07 | 3 |
ileum | 2.28e-07 | 3 |
mucosa of small intestine | 2.28e-07 | 3 |
wall of small intestine | 2.28e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.