FFCP PHASE1:Mm9::chr16:53576572..53576579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1149|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:53576572..53576579,+|id=chr16:53576572..53576579,+|ontology_enrichment_celltype=CL:0000838!1.30e-09!12;CL:0000542!9.30e-09!13;CL:0000051!9.30e-09!13;CL:0000084!3.09e-08!11;CL:0000827!3.09e-08!11;CL:0000738!3.99e-08!17;CL:0002087!3.99e-08!17;CL:0000791!6.00e-08!9;CL:0000789!6.00e-08!9;CL:0002420!6.00e-08!9;CL:0002419!6.00e-08!9;CL:0000790!6.00e-08!9;CL:0000349!6.90e-08!3;CL:0000351!6.90e-08!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.33e-65,3;CL:0000351,1.33e-65,3;CL:0000625,1.39e-22,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000358!6.90e-08!3;UBERON:0000307!6.90e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.33e-65,3;UBERON:0000307,1.33e-65,3;UBERON:0007010,1.33e-65,3|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0.468129052643987,0,0.0797721589953364,0.513602189793617,0,0,0,0.699561878128147,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0.288635524920988,0.116876902181569,0,13.9851150625661,1.70456327558004,1.34307693091263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr16:53576572..53576579,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1149 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:53576572..53576579,+ | |||
|id=chr16:53576572..53576579,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.30e-09!12;CL:0000542!9.30e-09!13;CL:0000051!9.30e-09!13;CL:0000084!3.09e-08!11;CL:0000827!3.09e-08!11;CL:0000738!3.99e-08!17;CL:0002087!3.99e-08!17;CL:0000791!6.00e-08!9;CL:0000789!6.00e-08!9;CL:0002420!6.00e-08!9;CL:0002419!6.00e-08!9;CL:0000790!6.00e-08!9;CL:0000349!6.90e-08!3;CL:0000351!6.90e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.33e-65,3;CL:0000351,1.33e-65,3;CL:0000625,1.39e-22,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000358!6.90e-08!3;UBERON:0000307!6.90e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.33e-65,3;UBERON:0000307,1.33e-65,3;UBERON:0007010,1.33e-65,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0.468129052643987,0,0.0797721589953364,0.513602189793617,0,0,0,0.699561878128147,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.63549621259146,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0.288635524920988,0.116876902181569,0,13.9851150625661,1.70456327558004,1.34307693091263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr16:53576572..53576579,+ | |||
}} |
Revision as of 12:54, 13 September 2013
Short description: | p@chr16:53576572..53576579, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:53576572..53576579, + |
Coexpression cluster: | MCL_coexpression_mm9:1149 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.33e-65 | 3 |
trophoblast cell | 1.33e-65 | 3 |
CD8-positive, alpha-beta T cell | 1.39e-22 | 1 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.33e-65 | 3 |
blastula | 1.33e-65 | 3 |
cleaving embryo | 1.33e-65 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.