FFCP PHASE1:Hg19::chr5:125695783..125695793,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24911|TSSclassifier=S|UniProt=B7Z6D8,Q96HH9|association_with_transcript=0bp_to_NM_001146319,uc011cwt.1_5end|coexpression_cluster_id=C50|description=CAGE_peak_24_at_GRAMD3_5end|id=chr5:125695783..125695793,+|ontology_enrichment_celltype=CL:0002541!6.35e-25!3;CL:0000197!3.96e-12!6;CL:0000098!3.96e-12!6;CL:0002167!3.96e-12!6;CL:0000864!4.91e-09!1;CL:0000091!4.91e-09!1|ontology_enrichment_celltype_v019=CL:0002541;8.86e-75;3!CL:0000349;2.51e-21;19!CL:0000723;7.06e-07;61|ontology_enrichment_celltype_v019_2=CL:0002541,6.07e-75,3;CL:0000349,2.32e-21,19|ontology_enrichment_development_v019=UBERON:0003124;2.78e-26;1|ontology_enrichment_disease=DOID:3571!4.91e-09!1;DOID:3371!7.85e-09!1;DOID:4549!7.85e-09!1;DOID:5861!7.85e-09!1;DOID:6496!7.85e-09!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!6.35e-25!3;UBERON:0000920!6.35e-25!3;UBERON:0005631!4.56e-20!14;UBERON:0000158!4.56e-20!14;UBERON:0003124!9.65e-19!7;UBERON:0000478!1.67e-11!24;UBERON:0001282!1.07e-08!1;UBERON:0009842!1.07e-08!1;UBERON:0003704!1.07e-08!1;UBERON:0001171!1.07e-08!1;UBERON:0001172!1.07e-08!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0001280!1.83e-08!4;UBERON:0004647!1.83e-08!4|ontology_enrichment_uberon_v019=UBERON:0003124;8.86e-75;3!UBERON:0000920;8.86e-75;3!UBERON:0005631;6.11e-40;10!UBERON:0000158;6.11e-40;10!UBERON:0000478;4.34e-26;24!UBERON:0001987;1.40e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.07e-75,3;UBERON:0003124,4.46e-57,7;UBERON:0005631,2.14e-44,14;UBERON:0000158,2.14e-44,14;UBERON:0000478,4.23e-26,24;UBERON:0004923,1.11e-09,66;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.630809660135739,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,1.08647371922008,9.8890359516895,2.56473261525214,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04764175658916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p24@GRAMD3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=S | |||
|UniProt=B7Z6D8,Q96HH9 | |||
|association_with_transcript=0bp_to_NM_001146319,uc011cwt.1_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_24_at_GRAMD3_5end | |||
|id=chr5:125695783..125695793,+ | |||
|ontology_enrichment_celltype=CL:0002541!6.35e-25!3;CL:0000197!3.96e-12!6;CL:0000098!3.96e-12!6;CL:0002167!3.96e-12!6;CL:0000864!4.91e-09!1;CL:0000091!4.91e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002541;8.86e-75;3!CL:0000349;2.51e-21;19!CL:0000723;7.06e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.07e-75,3;CL:0000349,2.32e-21,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.78e-26;1 | |||
|ontology_enrichment_disease=DOID:3571!4.91e-09!1;DOID:3371!7.85e-09!1;DOID:4549!7.85e-09!1;DOID:5861!7.85e-09!1;DOID:6496!7.85e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.35e-25!3;UBERON:0000920!6.35e-25!3;UBERON:0005631!4.56e-20!14;UBERON:0000158!4.56e-20!14;UBERON:0003124!9.65e-19!7;UBERON:0000478!1.67e-11!24;UBERON:0001282!1.07e-08!1;UBERON:0009842!1.07e-08!1;UBERON:0003704!1.07e-08!1;UBERON:0001171!1.07e-08!1;UBERON:0001172!1.07e-08!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0001280!1.83e-08!4;UBERON:0004647!1.83e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.86e-75;3!UBERON:0000920;8.86e-75;3!UBERON:0005631;6.11e-40;10!UBERON:0000158;6.11e-40;10!UBERON:0000478;4.34e-26;24!UBERON:0001987;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.07e-75,3;UBERON:0003124,4.46e-57,7;UBERON:0005631,2.14e-44,14;UBERON:0000158,2.14e-44,14;UBERON:0000478,4.23e-26,24;UBERON:0004923,1.11e-09,66;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.630809660135739,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0,1.08647371922008,9.8890359516895,2.56473261525214,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971121518136371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04764175658916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p24@GRAMD3 | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p24@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_GRAMD3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_NM_001146319, uc011cwt.1_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z6D8Q96HH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.07e-75 | 3 |
extraembryonic cell | 2.32e-21 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.07e-75 | 3 |
chorion | 4.46e-57 | 7 |
extraembryonic membrane | 2.14e-44 | 14 |
membranous layer | 2.14e-44 | 14 |
extraembryonic structure | 4.23e-26 | 24 |
organ component layer | 1.11e-09 | 66 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.