FFCP PHASE1:Hg19::chr5:125800836..125800850,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24911|TSSclassifier=S|UniProt=B7Z8T2|association_with_transcript=0bp_to_ENST00000505441,ENST00000509882,ENST00000511134_5end|coexpression_cluster_id=C94|description=CAGE_peak_21_at_GRAMD3_5end|id=chr5:125800836..125800850,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000313;3.25e-19;1!CL:0000159;2.72e-10;2|ontology_enrichment_celltype_v019_2=CL:0000313,3.25e-19,1;CL:0000159,2.72e-10,2|ontology_enrichment_development_v019=UBERON:0006965;2.72e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;3.25e-19;1|ontology_enrichment_disease_v019_2=DOID:2152,3.25e-19,1|ontology_enrichment_uberon=UBERON:0003127!2.59e-11!2;UBERON:0000341!2.72e-11!2;UBERON:0006562!3.37e-11!11;UBERON:0000065!4.86e-11!53;UBERON:0001004!7.60e-09!72;UBERON:0000974!2.67e-08!10;UBERON:0001042!2.99e-08!10;UBERON:0009145!2.99e-08!10;UBERON:0004119!5.97e-07!169;UBERON:0000925!5.97e-07!169;UBERON:0006595!5.97e-07!169|ontology_enrichment_uberon_v019=UBERON:0000341;1.42e-36;2!UBERON:0004911;3.25e-19;1!UBERON:0000974;6.50e-13;6!UBERON:0003127;1.64e-10;2!UBERON:0002370;1.89e-10;2!UBERON:0005058;1.89e-10;2!UBERON:0009113;1.89e-10;2!UBERON:0004909;2.72e-10;2!UBERON:0001723;2.79e-07;3!UBERON:0001033;2.79e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.18e-36,2;UBERON:0004911,3.25e-19,1;UBERON:0000974,7.29e-17,10;UBERON:0003127,1.57e-10,2;UBERON:0004909,2.72e-10,2;UBERON:0000065,1.83e-08,54;UBERON:0001042,3.37e-08,10;UBERON:0009145,3.37e-08,10;UBERON:0006562,1.56e-07,11;UBERON:0001723,2.63e-07,3;UBERON:0001033,2.63e-07,3;UBERON:0010056,2.63e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,1.46329140498388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,1.10043013569766,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23040974977572,0,0,0,0,0,0,0,0.596852325484105,0,0,0,4.37792246343353,0,0,10.817297816315,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,1.1903221573187,0.452122368852043,2.60713800042603,0,0.25458863311266,0,0,1.36893320434112,0.875576689189638,4.94883217209467,0.99798106963804,0,0,0,0,0,0.244482888365733,0,0,0,0|short_description=p21@GRAMD3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=S | |||
|UniProt=B7Z8T2 | |||
|association_with_transcript=0bp_to_ENST00000505441,ENST00000509882,ENST00000511134_5end | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_21_at_GRAMD3_5end | |||
|id=chr5:125800836..125800850,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;3.25e-19;1!CL:0000159;2.72e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.25e-19,1;CL:0000159,2.72e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.72e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;3.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.25e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0003127!2.59e-11!2;UBERON:0000341!2.72e-11!2;UBERON:0006562!3.37e-11!11;UBERON:0000065!4.86e-11!53;UBERON:0001004!7.60e-09!72;UBERON:0000974!2.67e-08!10;UBERON:0001042!2.99e-08!10;UBERON:0009145!2.99e-08!10;UBERON:0004119!5.97e-07!169;UBERON:0000925!5.97e-07!169;UBERON:0006595!5.97e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.42e-36;2!UBERON:0004911;3.25e-19;1!UBERON:0000974;6.50e-13;6!UBERON:0003127;1.64e-10;2!UBERON:0002370;1.89e-10;2!UBERON:0005058;1.89e-10;2!UBERON:0009113;1.89e-10;2!UBERON:0004909;2.72e-10;2!UBERON:0001723;2.79e-07;3!UBERON:0001033;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.18e-36,2;UBERON:0004911,3.25e-19,1;UBERON:0000974,7.29e-17,10;UBERON:0003127,1.57e-10,2;UBERON:0004909,2.72e-10,2;UBERON:0000065,1.83e-08,54;UBERON:0001042,3.37e-08,10;UBERON:0009145,3.37e-08,10;UBERON:0006562,1.56e-07,11;UBERON:0001723,2.63e-07,3;UBERON:0001033,2.63e-07,3;UBERON:0010056,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,1.46329140498388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747511887973863,1.10043013569766,0.828478110694391,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23040974977572,0,0,0,0,0,0,0,0.596852325484105,0,0,0,4.37792246343353,0,0,10.817297816315,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,1.1903221573187,0.452122368852043,2.60713800042603,0,0.25458863311266,0,0,1.36893320434112,0.875576689189638,4.94883217209467,0.99798106963804,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p21@GRAMD3 | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p21@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_GRAMD3_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000505441, ENST00000509882, ENST00000511134_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z8T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.25e-19 | 1 |
seromucus secreting cell | 2.72e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
throat | 1.18e-36 | 2 |
epithelium of female gonad | 3.25e-19 | 1 |
neck | 7.29e-17 | 10 |
open tracheal system trachea | 1.57e-10 | 2 |
epithelium of gonad | 2.72e-10 | 2 |
respiratory tract | 1.83e-08 | 54 |
chordate pharynx | 3.37e-08 | 10 |
pharyngeal region of foregut | 3.37e-08 | 10 |
pharynx | 1.56e-07 | 11 |
tongue | 2.63e-07 | 3 |
gustatory system | 2.63e-07 | 3 |
future tongue | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.25e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.