FFCP PHASE1:Mm9::chr17:26141835..26141850,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=24|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:26141835..26141850,-|id=chr17:26141835..26141850,-|ontology_enrichment_celltype=CL:0000239!2.35e-12!6;CL:0000677!2.35e-12!6;CL:0000212!2.35e-12!6;CL:0000584!2.35e-12!6;CL:0000075!1.84e-10!7;CL:0002563!2.59e-10!9;CL:0002251!2.59e-10!9;CL:0000473!6.18e-07!3;CL:0000627!6.18e-07!3;CL:0000682!6.18e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,7.48e-13,3;CL:0000239,1.34e-12,6;CL:0000677,1.34e-12,6;CL:0000584,1.34e-12,6;CL:0000075,8.16e-11,7;CL:0002563,1.99e-08,9;CL:0002251,1.99e-08,9;CL:0000066,7.53e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.28e-26!43;UBERON:0000344!1.58e-20!15;UBERON:0005409!4.87e-19!59;UBERON:0001242!2.92e-17!13;UBERON:0000060!2.92e-17!13;UBERON:0001262!2.92e-17!13;UBERON:0004786!2.92e-17!13;UBERON:0004923!1.33e-11!24;UBERON:0003350!2.59e-10!9;UBERON:0004808!2.59e-10!9;UBERON:0001277!2.59e-10!9;UBERON:0000485!3.21e-08!11;UBERON:0000331!7.75e-07!3;UBERON:0002116!7.75e-07!3;UBERON:0001204!7.75e-07!3;UBERON:0001168!7.75e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.51e-42,31;UBERON:0005409,6.82e-27,47;UBERON:0001242,1.50e-20,13;UBERON:0001262,1.50e-20,13;UBERON:0004786,1.50e-20,13;UBERON:0000344,1.13e-17,15;UBERON:0002108,1.31e-16,4;UBERON:0000331,1.20e-12,3;UBERON:0002116,1.20e-12,3;UBERON:0001204,1.20e-12,3;UBERON:0001168,1.20e-12,3;UBERON:0004923,1.20e-10,24;UBERON:0004921,2.28e-09,114;UBERON:0001007,3.73e-09,116;UBERON:0001555,3.73e-09,116;UBERON:0007026,3.73e-09,116;UBERON:0004119,6.01e-09,118;UBERON:0000925,6.01e-09,118;UBERON:0006595,6.01e-09,118;UBERON:0003350,1.99e-08,9;UBERON:0004808,1.99e-08,9;UBERON:0001277,1.99e-08,9;UBERON:0000485,6.67e-07,11|phase1_expression=0,9.42233600626275,5.45999087267443,8.77146212789807,7.51343594919521,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.91763712426868,2.29692785646008,1.7230479846363,1.939241094173,1.52018735565099,2.26827116783938,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,4.23120906661671,0,0,0,0.201683524623343,1.11189021922435,0.951128130562796,4.74529061544512,2.30578536613615,2.01068167040216,0.994782360205754,2.72949721966768,0.898819408654221,2.16138049874694,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0.37456602987953,0.128050304809739,0.0574354689556133,0.476293691283074,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr17:26141835..26141850,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:26141835..26141850,- | |||
|id=chr17:26141835..26141850,- | |||
|ontology_enrichment_celltype=CL:0000239!2.35e-12!6;CL:0000677!2.35e-12!6;CL:0000212!2.35e-12!6;CL:0000584!2.35e-12!6;CL:0000075!1.84e-10!7;CL:0002563!2.59e-10!9;CL:0002251!2.59e-10!9;CL:0000473!6.18e-07!3;CL:0000627!6.18e-07!3;CL:0000682!6.18e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,7.48e-13,3;CL:0000239,1.34e-12,6;CL:0000677,1.34e-12,6;CL:0000584,1.34e-12,6;CL:0000075,8.16e-11,7;CL:0002563,1.99e-08,9;CL:0002251,1.99e-08,9;CL:0000066,7.53e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.28e-26!43;UBERON:0000344!1.58e-20!15;UBERON:0005409!4.87e-19!59;UBERON:0001242!2.92e-17!13;UBERON:0000060!2.92e-17!13;UBERON:0001262!2.92e-17!13;UBERON:0004786!2.92e-17!13;UBERON:0004923!1.33e-11!24;UBERON:0003350!2.59e-10!9;UBERON:0004808!2.59e-10!9;UBERON:0001277!2.59e-10!9;UBERON:0000485!3.21e-08!11;UBERON:0000331!7.75e-07!3;UBERON:0002116!7.75e-07!3;UBERON:0001204!7.75e-07!3;UBERON:0001168!7.75e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.51e-42,31;UBERON:0005409,6.82e-27,47;UBERON:0001242,1.50e-20,13;UBERON:0001262,1.50e-20,13;UBERON:0004786,1.50e-20,13;UBERON:0000344,1.13e-17,15;UBERON:0002108,1.31e-16,4;UBERON:0000331,1.20e-12,3;UBERON:0002116,1.20e-12,3;UBERON:0001204,1.20e-12,3;UBERON:0001168,1.20e-12,3;UBERON:0004923,1.20e-10,24;UBERON:0004921,2.28e-09,114;UBERON:0001007,3.73e-09,116;UBERON:0001555,3.73e-09,116;UBERON:0007026,3.73e-09,116;UBERON:0004119,6.01e-09,118;UBERON:0000925,6.01e-09,118;UBERON:0006595,6.01e-09,118;UBERON:0003350,1.99e-08,9;UBERON:0004808,1.99e-08,9;UBERON:0001277,1.99e-08,9;UBERON:0000485,6.67e-07,11 | |||
|phase1_expression=0,9.42233600626275,5.45999087267443,8.77146212789807,7.51343594919521,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,0.91763712426868,2.29692785646008,1.7230479846363,1.939241094173,1.52018735565099,2.26827116783938,1.33038306393183,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,4.23120906661671,0,0,0,0.201683524623343,1.11189021922435,0.951128130562796,4.74529061544512,2.30578536613615,2.01068167040216,0.994782360205754,2.72949721966768,0.898819408654221,2.16138049874694,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0.37456602987953,0.128050304809739,0.0574354689556133,0.476293691283074,0.463537303779422,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr17:26141835..26141850,- | |||
}} |
Revision as of 13:48, 13 September 2013
Short description: | p@chr17:26141835..26141850, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:26141835..26141850, - |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 7.48e-13 | 3 |
brush border epithelial cell | 1.34e-12 | 6 |
gut absorptive cell | 1.34e-12 | 6 |
enterocyte | 1.34e-12 | 6 |
columnar/cuboidal epithelial cell | 8.16e-11 | 7 |
intestinal epithelial cell | 1.99e-08 | 9 |
epithelial cell of alimentary canal | 1.99e-08 | 9 |
epithelial cell | 7.53e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.51e-42 | 31 |
gastrointestinal system | 6.82e-27 | 47 |
intestinal mucosa | 1.50e-20 | 13 |
wall of intestine | 1.50e-20 | 13 |
gastrointestinal system mucosa | 1.50e-20 | 13 |
mucosa | 1.13e-17 | 15 |
small intestine | 1.31e-16 | 4 |
ileal mucosa | 1.20e-12 | 3 |
ileum | 1.20e-12 | 3 |
mucosa of small intestine | 1.20e-12 | 3 |
wall of small intestine | 1.20e-12 | 3 |
organ component layer | 1.20e-10 | 24 |
subdivision of digestive tract | 2.28e-09 | 114 |
digestive system | 3.73e-09 | 116 |
digestive tract | 3.73e-09 | 116 |
primitive gut | 3.73e-09 | 116 |
endoderm-derived structure | 6.01e-09 | 118 |
endoderm | 6.01e-09 | 118 |
presumptive endoderm | 6.01e-09 | 118 |
epithelium of mucosa | 1.99e-08 | 9 |
gastrointestinal system epithelium | 1.99e-08 | 9 |
intestinal epithelium | 1.99e-08 | 9 |
simple columnar epithelium | 6.67e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.