FFCP PHASE1:Mm9::chr17:34764027..34764037,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54397|HGNC=|MCL_coexpression_id=524|UniProt=O35448|association_with_transcript=4bp_to_NM_019441,uc008cdd.1_5end|description=CAGE_peak_16_at_Ppt2_5end|id=chr17:34764027..34764037,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!8.23e-16!14;UBERON:0003918!8.23e-16!14;UBERON:0005095!8.23e-16!14;UBERON:0007687!8.23e-16!14;UBERON:0006554!1.28e-13!16;UBERON:0001008!1.02e-12!17;UBERON:0000489!5.70e-10!21|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.50e-34,14;UBERON:0003918,4.50e-34,14;UBERON:0011143,4.50e-34,14;UBERON:0005095,4.50e-34,14;UBERON:0007687,4.50e-34,14;UBERON:0006554,1.62e-26,18;UBERON:0001008,4.03e-25,19;UBERON:0000489,9.92e-23,21;UBERON:0003103,4.74e-11,43;UBERON:0006834,5.74e-11,1;UBERON:0005172,1.13e-09,49;UBERON:0005173,1.13e-09,49;UBERON:0002417,1.13e-09,49;UBERON:0000916,1.13e-09,49;UBERON:0003104,1.01e-07,61;UBERON:0009142,1.01e-07,61;UBERON:0009569,4.08e-07,66|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,1.22190796707189,2.32742984601151,2.45475369616115,1.58091342810643,1.32849133181642,2.98297582898612,1.85095745882701,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.269141569828427,0,0,1.50145980360946,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p16@Ppt2}} | ||
|EntrezGene=54397 | |||
|HGNC= | |||
|MCL_coexpression_id=524 | |||
|UniProt=O35448 | |||
|association_with_transcript=4bp_to_NM_019441,uc008cdd.1_5end | |||
|description=CAGE_peak_16_at_Ppt2_5end | |||
|id=chr17:34764027..34764037,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!8.23e-16!14;UBERON:0003918!8.23e-16!14;UBERON:0005095!8.23e-16!14;UBERON:0007687!8.23e-16!14;UBERON:0006554!1.28e-13!16;UBERON:0001008!1.02e-12!17;UBERON:0000489!5.70e-10!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.50e-34,14;UBERON:0003918,4.50e-34,14;UBERON:0011143,4.50e-34,14;UBERON:0005095,4.50e-34,14;UBERON:0007687,4.50e-34,14;UBERON:0006554,1.62e-26,18;UBERON:0001008,4.03e-25,19;UBERON:0000489,9.92e-23,21;UBERON:0003103,4.74e-11,43;UBERON:0006834,5.74e-11,1;UBERON:0005172,1.13e-09,49;UBERON:0005173,1.13e-09,49;UBERON:0002417,1.13e-09,49;UBERON:0000916,1.13e-09,49;UBERON:0003104,1.01e-07,61;UBERON:0009142,1.01e-07,61;UBERON:0009569,4.08e-07,66 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,1.22190796707189,2.32742984601151,2.45475369616115,1.58091342810643,1.32849133181642,2.98297582898612,1.85095745882701,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0.269141569828427,0,0,1.50145980360946,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p16@Ppt2 | |||
}} |
Revision as of 14:16, 13 September 2013
Short description: | p16@Ppt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Ppt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:524 |
Association with transcript: | 4bp_to_NM_019441, uc008cdd.1_5end |
EntrezGene: | Ppt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 4.50e-34 | 14 |
kidney mesenchyme | 4.50e-34 | 14 |
upper urinary tract | 4.50e-34 | 14 |
kidney rudiment | 4.50e-34 | 14 |
kidney field | 4.50e-34 | 14 |
urinary system structure | 1.62e-26 | 18 |
renal system | 4.03e-25 | 19 |
cavitated compound organ | 9.92e-23 | 21 |
compound organ | 4.74e-11 | 43 |
uterus or analog | 5.74e-11 | 1 |
abdomen element | 1.13e-09 | 49 |
abdominal segment element | 1.13e-09 | 49 |
abdominal segment of trunk | 1.13e-09 | 49 |
abdomen | 1.13e-09 | 49 |
mesenchyme | 1.01e-07 | 61 |
entire embryonic mesenchyme | 1.01e-07 | 61 |
subdivision of trunk | 4.08e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.